Tag |
Content |
WERAM ID |
WERAM-Cap-0155 |
Ensembl Protein ID |
ENSCPOP00000012861.2 |
Gene Name |
HDAC3 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-I |
4.70e-170 |
565.1 |
4 |
390 |
|
Organism |
Cavia porcellus |
Domain Profile |
HDAC Class-I
class-1.txt 2 kvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvge 90 +vay+yd+dvg++hyg++hpmkp+rl+lth+Lvl+ygl+kk+ ++kp +as++++++fhse+yi+fl++v+p+n++ ++k+l+ fnvg+ ENSCPOP00000012861.2 4 TVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSEDYIDFLQRVSPTNMQGFTKSLNAFNVGD 92 79*************************************************************************************** PP class-1.txt 91 dcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeaf 179 dcPvf glfe+c+ +tGasl++a++Ln+k +diainwaGGlhhakk easGfcyvnDiv++ilellk+h+rvlyidid+hhGDgv+eaf ENSCPOP00000012861.2 93 DCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAF 181 ***************************************************************************************** PP class-1.txt 180 yttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefn 268 y tdrvmtvsfhkyg++ffPgtGd+++vgae+g+yy++nvPl+dgidD+sy+++f++vi++v+++++P+++vlqcGaDsl +Drlg+fn ENSCPOP00000012861.2 182 YLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFN 270 ***************************************************************************************** PP class-1.txt 269 lsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313 lsi+gh+ecv++vksfn+pllvlGGGGYt+rnvaRcwtyet++++ ENSCPOP00000012861.2 271 LSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLV 315 ******************************************986 PP class-1.txt 228 esyekifksviskv.ieafePeavvlqcGaDslagDrl 264 +++ +i +++ +++ + + P++ + ++ aD l+ Dr ENSCPOP00000012861.2 353 QYLDQIRQTIFENLkMLNHAPSVQIHDVPADLLTYDRT 390 67788999999887456799**************9996 PP
|
Protein Sequence (Fasta) | MAKTVAYFYD PDVGNFHYGA GHPMKPHRLA LTHSLVLHYG LYKKMIVFKP YQASQHDMCR 60 FHSEDYIDFL QRVSPTNMQG FTKSLNAFNV GDDCPVFPGL FEFCSRYTGA SLQGATQLNN 120 KICDIAINWA GGLHHAKKFE ASGFCYVNDI VIGILELLKY HPRVLYIDID IHHGDGVQEA 180 FYLTDRVMTV SFHKYGNYFF PGTGDMYEVG AESGRYYCLN VPLRDGIDDQ SYKHLFQPVI 240 NQVVDFYQPT CIVLQCGADS LGCDRLGCFN LSIRGHGECV EYVKSFNIPL LVLGGGGYTV 300 RNVARCWTYE TSLLVEEAIS EELPYSEYFE YFAPDFTLHP DVSTRIENQN SRQYLDQIRQ 360 TIFENLKMLN HAPSVQIHDV PADLLTYDRT DEADAEERGP EENYSRPEAP NEFYDGDHDN 420 DKESDVEI 428Protein Fasta Sequence
>ENSCPOP00000012861.2|Class-I|Cavia porcellus MAKTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPADLLTYDRTDEADAEERGPEENYSRPEAPNEFYDGDHDNDKESDVEI
|
Nucleotide Sequence (Fasta) | ATGGCCAAGA CCGTGGCCTA TTTCTACGAC CCCGACGTGG GCAACTTCCA CTACGGAGCT 60 GGGCACCCTA TGAAACCCCA TCGCCTGGCG TTGACCCATA GCCTTGTTCT GCACTATGGT 120 CTCTATAAGA AGATGATCGT CTTCAAGCCA TACCAGGCCT CCCAGCATGA CATGTGCCGC 180 TTCCACTCCG AGGACTACAT TGACTTCCTG CAGAGAGTCA GTCCTACCAA TATGCAAGGC 240 TTCACCAAGA GCCTTAATGC CTTCAACGTG GGCGATGACT GCCCTGTGTT TCCTGGACTC 300 TTTGAGTTCT GCTCCCGTTA CACAGGTGCA TCTCTGCAAG GAGCAACGCA GCTAAACAAC 360 AAGATCTGTG ATATTGCCAT TAACTGGGCT GGTGGCCTGC ACCATGCCAA GAAGTTTGAG 420 GCCTCTGGCT TCTGTTATGT CAATGACATT GTGATTGGTA TCCTGGAGCT GCTGAAGTAC 480 CATCCTCGGG TGCTCTACAT TGATATTGAC ATCCACCATG GTGATGGGGT TCAGGAAGCC 540 TTCTACCTCA CTGACCGGGT CATGACTGTG TCCTTCCACA AATACGGAAA TTACTTCTTT 600 CCTGGCACAG GTGACATGTA CGAAGTTGGA GCAGAGAGTG GCCGATACTA CTGTCTCAAT 660 GTCCCCTTAC GGGACGGCAT TGATGATCAG AGTTACAAGC ATCTTTTCCA ACCAGTCATC 720 AACCAGGTGG TGGACTTCTA CCAACCCACA TGCATTGTGC TCCAGTGCGG AGCTGACTCT 780 CTGGGCTGTG ATCGATTGGG CTGTTTCAAC CTCAGCATCC GAGGACATGG GGAATGCGTT 840 GAATATGTCA AGAGCTTTAA TATCCCTCTG CTGGTGCTTG GTGGTGGTGG CTATACTGTT 900 CGAAATGTTG CCCGCTGCTG GACTTACGAG ACATCCTTGC TGGTGGAAGA GGCCATTAGT 960 GAGGAGCTTC CCTATAGTGA ATACTTCGAG TACTTTGCCC CGGACTTCAC GCTCCATCCA 1020 GATGTCAGCA CCCGCATCGA GAATCAGAAT TCACGCCAGT ATCTGGACCA GATCCGCCAG 1080 ACAATCTTTG AAAACTTGAA GATGTTGAAC CATGCACCTA GCGTCCAGAT TCATGATGTG 1140 CCTGCAGACC TCCTGACGTA TGACAGGACG GATGAGGCTG ATGCAGAGGA AAGGGGTCCT 1200 GAGGAGAACT ACAGCAGGCC AGAGGCACCC AATGAATTCT ACGATGGAGA CCATGACAAT 1260 GACAAAGAGA GCGATGTGGA GATT
1285Nucleotide Fasta Sequence
>ENSCPOP00000012861.2|Class-I|Cavia porcellus ATGGCCAAGACCGTGGCCTATTTCTACGACCCCGACGTGGGCAACTTCCACTACGGAGCTGGGCACCCTATGAAACCCCATCGCCTGGCGTTGACCCATAGCCTTGTTCTGCACTATGGTCTCTATAAGAAGATGATCGTCTTCAAGCCATACCAGGCCTCCCAGCATGACATGTGCCGCTTCCACTCCGAGGACTACATTGACTTCCTGCAGAGAGTCAGTCCTACCAATATGCAAGGCTTCACCAAGAGCCTTAATGCCTTCAACGTGGGCGATGACTGCCCTGTGTTTCCTGGACTCTTTGAGTTCTGCTCCCGTTACACAGGTGCATCTCTGCAAGGAGCAACGCAGCTAAACAACAAGATCTGTGATATTGCCATTAACTGGGCTGGTGGCCTGCACCATGCCAAGAAGTTTGAGGCCTCTGGCTTCTGTTATGTCAATGACATTGTGATTGGTATCCTGGAGCTGCTGAAGTACCATCCTCGGGTGCTCTACATTGATATTGACATCCACCATGGTGATGGGGTTCAGGAAGCCTTCTACCTCACTGACCGGGTCATGACTGTGTCCTTCCACAAATACGGAAATTACTTCTTTCCTGGCACAGGTGACATGTACGAAGTTGGAGCAGAGAGTGGCCGATACTACTGTCTCAATGTCCCCTTACGGGACGGCATTGATGATCAGAGTTACAAGCATCTTTTCCAACCAGTCATCAACCAGGTGGTGGACTTCTACCAACCCACATGCATTGTGCTCCAGTGCGGAGCTGACTCTCTGGGCTGTGATCGATTGGGCTGTTTCAACCTCAGCATCCGAGGACATGGGGAATGCGTTGAATATGTCAAGAGCTTTAATATCCCTCTGCTGGTGCTTGGTGGTGGTGGCTATACTGTTCGAAATGTTGCCCGCTGCTGGACTTACGAGACATCCTTGCTGGTGGAAGAGGCCATTAGTGAGGAGCTTCCCTATAGTGAATACTTCGAGTACTTTGCCCCGGACTTCACGCTCCATCCAGATGTCAGCACCCGCATCGAGAATCAGAATTCACGCCAGTATCTGGACCAGATCCGCCAGACAATCTTTGAAAACTTGAAGATGTTGAACCATGCACCTAGCGTCCAGATTCATGATGTGCCTGCAGACCTCCTGACGTATGACAGGACGGATGAGGCTGATGCAGAGGAAAGGGGTCCTGAGGAGAACTACAGCAGGCCAGAGGCACCCAATGAATTCTACGATGGAGACCATGACAATGACAAAGAGAGCGATGTGGAGATT
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |