| Tag |
Content |
| WERAM ID |
WERAM-Brd-0084 |
| Ensembl Protein ID |
BRADI3G44780.1 |
| Gene Name |
BRADI3G44780.1 |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
4.10e-123 |
411.5 |
19 |
346 |
|
| Organism |
Brachypodium distachyon |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenae.............els.. 80
++v+y+yd+ ++++ yg++h+m+p+r+++th Lv +ygl ++++++++ a+ ++l fh y+e+l++++pe+ +
BRADI3G44780.1 19 RRVSYYYDPGIANVDYGEGHVMVPRRVAMTHALVSSYGLLPDMKRLRTRPATESDLRAFHGASYVELLRSINPESYRlnldqaktraeerG-Vgr 112
589***********************************************************************98877877665544331.122 PP
class-1.txt 81 kelkkfnvgedcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgv 175
++k+ + ++d Pv+dgl++yc ++G+sl+aa+ L +e+d+ainw+GG+hha + +asGfcyvnDivlai++ll ++rvly+did+hhGDgv
BRADI3G44780.1 113 VKTKENGDNYDNPVIDGLWDYCLSYAGGSLAAARALACGESDVAINWSGGMHHACRAKASGFCYVNDIVLAIQRLLARFRRVLYVDIDVHHGDGV 207
3555666667************************************************************************************* PP
class-1.txt 176 eeafyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyek.ifksviskvieafePeavvlqcGaDslagDrlgefnl 269
e+ f+ rvmtvsfh+y+ ffP+tG+ dvg+++g y+a+nvP+k g+dDe y + +f++++ +v+e+f P+avvlqcGaDsl+gD +g f+l
BRADI3G44780.1 208 EHRFRREPRVMTVSFHRYDGVFFPTTGEAADVGQGEGLYHALNVPMKAGMDDEGYLNvLFRPIMARVMEVFAPDAVVLQCGADSLSGDAIGGFHL 302
*****************************************************8865279*********************************** PP
class-1.txt 270 sikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
s+kgha cv f++sfn+pll+lGGGGYt++ va cw+yetav++
BRADI3G44780.1 303 SVKGHAACVAFLRSFNVPLLLLGGGGYTINHVASCWCYETAVAV 346
*****************************************986 PP
|
Protein Sequence
(Fasta) | METEGHSLRS ASCVDGGKRR VSYYYDPGIA NVDYGEGHVM VPRRVAMTHA LVSSYGLLPD 60
MKRLRTRPAT ESDLRAFHGA SYVELLRSIN PESYRLNLDQ AKTRAEERGV GRVKTKENGD 120
NYDNPVIDGL WDYCLSYAGG SLAAARALAC GESDVAINWS GGMHHACRAK ASGFCYVNDI 180
VLAIQRLLAR FRRVLYVDID VHHGDGVEHR FRREPRVMTV SFHRYDGVFF PTTGEAADVG 240
QGEGLYHALN VPMKAGMDDE GYLNVLFRPI MARVMEVFAP DAVVLQCGAD SLSGDAIGGF 300
HLSVKGHAAC VAFLRSFNVP LLLLGGGGYT INHVASCWCY ETAVAVGKEK EIPDDIPYHG 360
YEHYYKDQGY KLHYAVDKKN GRKDVSGLEK IKQDALKNLS MLRPPPTLLL QEPAGGDINV 420
NDLYDNDYSN PKRRREEDDP MERLHRLCGV EDLKGFFTGI GRRKKLGQL 469Protein Fasta Sequence
>BRADI3G44780.1|Class-I|Brachypodium distachyon
METEGHSLRSASCVDGGKRRVSYYYDPGIANVDYGEGHVMVPRRVAMTHALVSSYGLLPDMKRLRTRPATESDLRAFHGASYVELLRSINPESYRLNLDQAKTRAEERGVGRVKTKENGDNYDNPVIDGLWDYCLSYAGGSLAAARALACGESDVAINWSGGMHHACRAKASGFCYVNDIVLAIQRLLARFRRVLYVDIDVHHGDGVEHRFRREPRVMTVSFHRYDGVFFPTTGEAADVGQGEGLYHALNVPMKAGMDDEGYLNVLFRPIMARVMEVFAPDAVVLQCGADSLSGDAIGGFHLSVKGHAACVAFLRSFNVPLLLLGGGGYTINHVASCWCYETAVAVGKEKEIPDDIPYHGYEHYYKDQGYKLHYAVDKKNGRKDVSGLEKIKQDALKNLSMLRPPPTLLLQEPAGGDINVNDLYDNDYSNPKRRREEDDPMERLHRLCGVEDLKGFFTGIGRRKKLGQL |
Nucleotide Sequence
(Fasta) | ATGGAGACGG AAGGGCACTC TCTGCGGTCG GCGTCGTGCG TGGACGGCGG CAAGAGGCGC 60
GTGAGCTACT ACTACGACCC GGGCATCGCC AACGTGGACT ACGGCGAGGG CCACGTCATG 120
GTGCCCCGCC GCGTGGCCAT GACGCACGCC CTCGTGTCCT CCTACGGCCT GCTCCCGGAC 180
ATGAAGCGCC TCCGCACCAG GCCCGCCACC GAAAGCGACC TGCGCGCCTT CCACGGCGCC 240
TCCTACGTCG AGCTCCTCCG CTCCATCAAC CCGGAATCCT ACCGCCTCAA CCTCGACCAG 300
GCCAAGACGC GGGCCGAGGA GCGCGGCGTC GGCCGCGTGA AGACCAAGGA GAACGGCGAC 360
AACTACGACA ACCCCGTCAT CGACGGCCTC TGGGACTACT GCCTCAGCTA CGCCGGCGGG 420
TCCCTGGCCG CGGCGCGCGC GCTGGCCTGC GGCGAGTCCG ACGTGGCCAT CAACTGGTCC 480
GGCGGGATGC ACCACGCGTG CCGGGCCAAG GCCAGCGGCT TCTGCTACGT CAACGACATC 540
GTGCTCGCCA TCCAGCGGCT CCTCGCCCGC TTCCGCCGCG TGCTCTACGT CGACATCGAC 600
GTGCACCACG GCGACGGCGT CGAGCACCGC TTCCGGAGGG AGCCCCGGGT CATGACGGTC 660
TCCTTCCACC GCTACGACGG CGTCTTCTTC CCCACCACCG GCGAGGCTGC GGACGTCGGC 720
CAAGGCGAGG GGCTCTACCA CGCGCTCAAC GTGCCGATGA AGGCCGGCAT GGACGACGAG 780
GGCTACCTCA ACGTCCTCTT CCGGCCCATC ATGGCCCGGG TCATGGAGGT GTTCGCGCCG 840
GACGCCGTCG TGCTGCAGTG CGGGGCCGAC TCGCTCTCGG GCGACGCGAT CGGCGGGTTC 900
CACCTGTCAG TCAAGGGCCA CGCCGCCTGC GTCGCCTTCC TCCGCAGCTT CAACGTGCCG 960
CTGCTCCTGC TCGGCGGCGG CGGCTACACC ATCAACCACG TCGCCTCCTG CTGGTGCTAC 1020
GAGACGGCGG TGGCCGTCGG CAAGGAGAAG GAGATCCCCG ACGACATACC CTACCACGGT 1080
TACGAGCACT ACTACAAGGA CCAGGGATAC AAGCTCCATT ATGCAGTGGA CAAGAAGAAC 1140
GGCAGGAAGG ATGTCTCTGG CCTGGAGAAG ATAAAGCAGG ACGCTCTGAA GAACCTCTCC 1200
ATGCTCAGGC CGCCGCCCAC ATTGCTGCTC CAGGAGCCCG CCGGTGGGGA CATCAACGTG 1260
AATGACCTCT ACGACAACGA CTACAGTAAT CCCAAGAGAA GAAGAGAGGA AGACGACCCC 1320
ATGGAGAGGC TGCACCGGCT CTGCGGCGTC GAGGACCTAA AAGGTTTCTT CACTGGGATC 1380
GGCAGGAGAA AGAAACTAGG ACAACTATAG TCTATAGGTC AAGACATACA GGGTACCCAA 1440
ATACCCAATG TAAAAGGTGA AAGACATACA TACAGGGTAC CCAATGTAAG TGATAAGCAC 1500
CACAATTGTC CAATCCCGTT AAGCATT
1528Nucleotide Fasta Sequence
>BRADI3G44780.1|Class-I|Brachypodium distachyon
ATGGAGACGGAAGGGCACTCTCTGCGGTCGGCGTCGTGCGTGGACGGCGGCAAGAGGCGCGTGAGCTACTACTACGACCCGGGCATCGCCAACGTGGACTACGGCGAGGGCCACGTCATGGTGCCCCGCCGCGTGGCCATGACGCACGCCCTCGTGTCCTCCTACGGCCTGCTCCCGGACATGAAGCGCCTCCGCACCAGGCCCGCCACCGAAAGCGACCTGCGCGCCTTCCACGGCGCCTCCTACGTCGAGCTCCTCCGCTCCATCAACCCGGAATCCTACCGCCTCAACCTCGACCAGGCCAAGACGCGGGCCGAGGAGCGCGGCGTCGGCCGCGTGAAGACCAAGGAGAACGGCGACAACTACGACAACCCCGTCATCGACGGCCTCTGGGACTACTGCCTCAGCTACGCCGGCGGGTCCCTGGCCGCGGCGCGCGCGCTGGCCTGCGGCGAGTCCGACGTGGCCATCAACTGGTCCGGCGGGATGCACCACGCGTGCCGGGCCAAGGCCAGCGGCTTCTGCTACGTCAACGACATCGTGCTCGCCATCCAGCGGCTCCTCGCCCGCTTCCGCCGCGTGCTCTACGTCGACATCGACGTGCACCACGGCGACGGCGTCGAGCACCGCTTCCGGAGGGAGCCCCGGGTCATGACGGTCTCCTTCCACCGCTACGACGGCGTCTTCTTCCCCACCACCGGCGAGGCTGCGGACGTCGGCCAAGGCGAGGGGCTCTACCACGCGCTCAACGTGCCGATGAAGGCCGGCATGGACGACGAGGGCTACCTCAACGTCCTCTTCCGGCCCATCATGGCCCGGGTCATGGAGGTGTTCGCGCCGGACGCCGTCGTGCTGCAGTGCGGGGCCGACTCGCTCTCGGGCGACGCGATCGGCGGGTTCCACCTGTCAGTCAAGGGCCACGCCGCCTGCGTCGCCTTCCTCCGCAGCTTCAACGTGCCGCTGCTCCTGCTCGGCGGCGGCGGCTACACCATCAACCACGTCGCCTCCTGCTGGTGCTACGAGACGGCGGTGGCCGTCGGCAAGGAGAAGGAGATCCCCGACGACATACCCTACCACGGTTACGAGCACTACTACAAGGACCAGGGATACAAGCTCCATTATGCAGTGGACAAGAAGAACGGCAGGAAGGATGTCTCTGGCCTGGAGAAGATAAAGCAGGACGCTCTGAAGAACCTCTCCATGCTCAGGCCGCCGCCCACATTGCTGCTCCAGGAGCCCGCCGGTGGGGACATCAACGTGAATGACCTCTACGACAACGACTACAGTAATCCCAAGAGAAGAAGAGAGGAAGACGACCCCATGGAGAGGCTGCACCGGCTCTGCGGCGTCGAGGACCTAAAAGGTTTCTTCACTGGGATCGGCAGGAGAAAGAAACTAGGACAACTATAGTCTATAGGTCAAGACATACAGGGTACCCAAATACCCAATGTAAAAGGTGAAAGACATACATACAGGGTACCCAATGTAAGTGATAAGCACCACAATTGTCCAATCCCGTTAAGCATT
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
