WERAM Information


Tag Content
WERAM ID WERAM-Sol-0053
Ensembl Protein ID Solyc03g112410.1.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Solyc03g112410.1 Solyc03g112410.1.1 Solyc03g112410.1.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 5.80e-155 516.3 22 340
Organism Solanum lycopersicum
Domain Profile
  HDAC Class-I

         class-1.txt   1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenae.elsk.elkkfnvg 89 
++v+y++d+++gey yg++h mkp+r++++h+L+lny+l++k+ei++p a++ee+ +fhs +y+efl++v+pe+ + ++ + + ++fnvg
Solyc03g112410.1.1 22 RRVSYFFDSSIGEYDYGEGHLMKPHRIRVAHNLILNYNLHRKMEIIEPFPATKEEIGSFHSSDYVEFLSSVSPETINdKYDSyQRRRFNVG 112
589***********************************************************************9883444348899***9 PP
class-1.txt 90 e.....dcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgv 175
dcPvf glf++cq+++G+s+ aa+kLn++eadiainwaGGlhhakkseasGfcyvnDivl+ilellk hkrvly+did+hhGDgv
Solyc03g112410.1.1 113 LdsesfDCPVFYGLFDFCQTSSGGSIGAAAKLNRNEADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHKRVLYVDIDVHHGDGV 203
6455668************************************************************************************ PP
class-1.txt 176 eeafyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlge 266
eeaf ttdrvmtvsfhk+g+ ffPgtG+++d+ga +gkyya+n Pl +gidDes++++f++vi+kv+e+++Peavv+qcGaDslagDrlg+
Solyc03g112410.1.1 204 EEAFFTTDRVMTVSFHKFGD-FFPGTGHIKDIGASTGKYYALNAPLGNGIDDESFRSLFRPVIQKVMEVYQPEAVVVQCGADSLAGDRLGV 293
********************.********************************************************************** PP
class-1.txt 267 fnlsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
fnls+kgha+c++f++sfn+pl++lGGGGYt++nvaRcw+yetav++
Solyc03g112410.1.1 294 FNLSVKGHADCIRFLRSFNVPLMMLGGGGYTVKNVARCWCYETAVAV 340
********************************************986 PP

Protein Sequence
(Fasta)
MDSSVVEGGA SLRSTGTDAT KRRVSYFFDS SIGEYDYGEG HLMKPHRIRV AHNLILNYNL 60
HRKMEIIEPF PATKEEIGSF HSSDYVEFLS SVSPETINDK YDSYQRRRFN VGLDSESFDC 120
PVFYGLFDFC QTSSGGSIGA AAKLNRNEAD IAINWAGGLH HAKKSEASGF CYVNDIVLGI 180
LELLKVHKRV LYVDIDVHHG DGVEEAFFTT DRVMTVSFHK FGDFFPGTGH IKDIGASTGK 240
YYALNAPLGN GIDDESFRSL FRPVIQKVME VYQPEAVVVQ CGADSLAGDR LGVFNLSVKG 300
HADCIRFLRS FNVPLMMLGG GGYTVKNVAR CWCYETAVAV GVELDNDLPY NEFYEYFAPD 360
YILYHESLHM KNENSPSELE RIRNTLLEQL SRLPHVPSVP FQVTPSVTEV PEKEDENMDQ 420
RPKPEISQDY DTDDEEKSNN GKFSNYYNL 449
Nucleotide Sequence
(Fasta)
ATGGATTCTT CAGTCGTGGA GGGCGGCGCA TCGCTCCGTT CGACGGGTAC CGACGCTACA 60
AAACGTCGTG TTTCTTATTT CTTCGACTCT TCCATCGGCG AATATGATTA CGGCGAGGGT 120
CATCTAATGA AGCCTCACCG TATTCGTGTT GCCCACAATC TTATTTTAAA CTATAATCTT 180
CACCGTAAAA TGGAGATAAT TGAACCGTTT CCGGCGACTA AGGAGGAAAT TGGGTCGTTT 240
CACTCGTCGG ACTATGTGGA GTTTCTCTCT TCAGTTTCTC CTGAGACTAT TAATGACAAG 300
TACGATTCCT ACCAGCGTAG ACGCTTCAAT GTTGGTTTGG ACTCGGAAAG CTTTGATTGT 360
CCTGTTTTTT ATGGGCTTTT TGATTTTTGT CAAACTTCAT CTGGTGGCTC AATTGGCGCC 420
GCCGCTAAGC TTAATAGGAA TGAAGCTGAT ATAGCTATCA ATTGGGCTGG TGGGTTGCAT 480
CATGCAAAGA AAAGTGAAGC TTCTGGATTT TGCTATGTCA ATGATATTGT TCTTGGAATT 540
CTAGAACTTC TCAAGGTCCA CAAGCGTGTA TTGTATGTAG ACATTGATGT TCATCACGGG 600
GATGGAGTTG AGGAGGCTTT TTTTACCACT GATCGGGTTA TGACAGTGTC TTTCCATAAG 660
TTTGGAGACT TCTTTCCTGG TACAGGGCAT ATCAAAGACA TTGGTGCAAG TACCGGGAAG 720
TACTATGCCT TAAATGCACC ATTGGGTAAT GGTATTGATG ATGAAAGTTT CCGTAGTCTA 780
TTCCGTCCTG TAATCCAAAA AGTGATGGAG GTTTATCAAC CTGAAGCTGT TGTTGTTCAA 840
TGTGGTGCTG ATTCACTAGC AGGAGACAGG TTGGGTGTCT TTAACTTGTC TGTTAAAGGC 900
CATGCAGATT GCATTCGATT CCTCAGGTCT TTCAATGTCC CTTTAATGAT GTTGGGTGGT 960
GGAGGTTATA CCGTTAAAAA CGTTGCTCGG TGCTGGTGCT ATGAGACAGC AGTTGCAGTT 1020
GGAGTAGAGC TTGATAATGA TTTGCCTTAC AATGAGTTTT ACGAGTATTT TGCCCCTGAT 1080
TATATTCTTT ATCATGAATC ATTACATATG AAGAATGAAA ATTCGCCCTC GGAACTAGAG 1140
AGGATCAGGA ACACTTTGCT GGAGCAACTC TCGCGTTTAC CCCATGTACC CAGTGTTCCA 1200
TTTCAAGTGA CACCTTCCGT AACAGAGGTT CCAGAAAAGG AAGACGAAAA CATGGATCAA 1260
AGGCCTAAAC CAGAGATAAG CCAAGATTAC GATACTGACG ACGAGGAGAA GTCAAATAAC 1320
GGAAAGTTCA GTAATTACTA CAATCTTTAA 1351
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sot-0054 PGSC0003DMT400046818 Solanum tuberosum 95 0.0 878
WERAM-Pot-0131 POPTR_0012s08570.1 Populus trichocarpa 75 0.0 688
WERAM-Glm-0223 GLYMA17G09320.1 Glycine max 73 0.0 687
WERAM-Viv-0108 VIT_17s0000g09070.t01 Vitis vinifera 73 0.0 677
WERAM-Met-0068 AES71453 Medicago truncatula 73 0.0 671
WERAM-Prp-0060 EMJ10303 Prunus persica 74 0.0 669
WERAM-Thc-0029 EOY20838 Theobroma cacao 73 0.0 666
WERAM-Arl-0113 fgenesh2_kg.8__ 2309__ AT5G63110.1 Arabidopsis lyrata 71 0.0 644
WERAM-Bro-0056 Bo3g104750.1 Brassica oleracea 70 0.0 643
WERAM-Art-0148 AT5G63110.1 Arabidopsis thaliana 70 0.0 641
WERAM-Brr-0193 Bra038607.1-P Brassica rapa 70 0.0 635
WERAM-Amt-0082 ERN02510 Amborella trichopoda 73 5e-175 611
WERAM-Sob-0102 Sb07g018230.1 Sorghum bicolor 66 2e-171 599
WERAM-Sei-0051 Si013709m Setaria italica 66 3e-170 595
WERAM-Php-0050 PP1S223_52V6.1 Physcomitrella patens 63 9e-170 593
WERAM-Zem-0077 GRMZM2G136067_P01 Zea mays 66 1e-169 593
WERAM-Orr-0094 ORUFI08G12880.1 Oryza rufipogon 65 5e-169 591
WERAM-Ors-0081 OS08T0344100-01 Oryza sativa 65 1e-168 589
WERAM-Orp-0087 OPUNC08G10650.1 Oryza punctata 65 1e-168 589
WERAM-Orm-0085 OMERI08G09730.1 Oryza meridionalis 65 1e-168 589
WERAM-Ori-0098 BGIOSGA028498-PA Oryza indica 65 1e-168 589
WERAM-Orgl-0088 OGLUM08G12440.1 Oryza glumaepatula 65 1e-168 589
WERAM-Org-0090 ORGLA08G0103000.1 Oryza glaberrima 65 1e-168 589
WERAM-Orbr-0098 OB08G20020.1 Oryza brachyantha 65 5e-168 588
WERAM-Tra-0274 Traes_6DS_08E9A4EDB.1 Triticum aestivum 64 9e-168 587
WERAM-Hov-0020 MLOC_17056.1 Hordeum vulgare 64 3e-166 582
WERAM-Brd-0077 BRADI3G22370.1 Brachypodium distachyon 64 3e-166 582
WERAM-Sem-0128 EFJ38890 Selaginella moellendorffii 63 3e-159 558
WERAM-Orb-0066 OBART06G19560.1 Oryza barthii 61 3e-156 548
WERAM-Mua-0044 GSMUA_Achr2P06520_001 Musa acuminata 70 2e-155 546
WERAM-Mup-0173 ENSMPUP00000015122.1 Mustela putorius furo 62 3e-155 545
WERAM-Anc-0033 ENSACAP00000004062.3 Anolis carolinensis 62 5e-155 545
WERAM-Ocp-0006 ENSOPRP00000000780.1 Ochotona princeps 62 7e-155 544
WERAM-Ran-0062 ENSRNOP00000012854.5 Rattus norvegicus 62 7e-155 544
WERAM-Ptv-0152 ENSPVAP00000012567.1 Pteropus vampyrus 62 8e-155 544
WERAM-Gaga-0034 ENSGALP00000005212.3 Gallus gallus 62 8e-155 544
WERAM-Mum-0093 ENSMUSP00000099657.4 Mus musculus 62 8e-155 544
WERAM-Ova-0221 ENSOARP00000022517.1 Ovis aries 62 1e-154 543
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 62 1e-154 543
WERAM-Orc-0030 ENSOCUP00000003186.2 Oryctolagus cuniculus 62 1e-154 543
WERAM-Loa-0056 ENSLAFP00000004079.2 Loxodonta africana 62 1e-154 543
WERAM-Tag-0022 ENSTGUP00000001473.1 Taeniopygia guttata 62 1e-154 543
WERAM-Nol-0026 ENSNLEP00000003167.1 Nomascus leucogenys 62 2e-154 543
WERAM-Cap-0092 ENSCPOP00000006985.2 Cavia porcellus 62 2e-154 542
WERAM-Hos-0092 ENSP00000362649.3 Homo sapiens 62 2e-154 542
WERAM-Gog-0132 ENSGGOP00000011454.2 Gorilla gorilla 62 2e-154 542
WERAM-Otg-0072 ENSOGAP00000005101.2 Otolemur garnettii 62 2e-154 542
WERAM-Dan-0175 ENSDNOP00000033349.1 Dasypus novemcinctus 62 6e-154 541
WERAM-Myl-0152 ENSMLUP00000012593.2 Myotis lucifugus 62 9e-154 540
WERAM-Caf-0116 ENSCAFP00000015619.3 Canis familiaris 62 2e-153 539
WERAM-Poa-0013 ENSPPYP00000001838.2 Pongo abelii 61 5e-153 538
WERAM-Aet-0051 EMT16627 Aegilops tauschii 64 3e-152 535
WERAM-Aim-0087 ENSAMEP00000008076.1 Ailuropoda melanoleuca 62 3e-152 535
WERAM-Drm-0018 FBpp0073173 Drosophila melanogaster 62 2e-151 533
WERAM-Tut-0167 ENSTTRP00000014262.1 Tursiops truncatus 59 6e-151 531
WERAM-Orni-0020 ONIVA02G09910.1 Oryza nivara 59 1e-150 530
WERAM-Cii-0014 ENSCINP00000005410.3 Ciona intestinalis 62 2e-150 529
WERAM-Meg-0047 ENSMGAP00000004521.2 Meleagris gallopavo 62 9e-150 527
WERAM-Chs-0011 ENSCSAP00000016960.1 Chlorocebus sabaeus 63 1e-149 527
WERAM-Pat-0210 ENSPTRP00000060659.1 Pan troglodytes 63 1e-149 526
WERAM-Eqc-0125 ENSECAP00000014039.1 Equus caballus 63 3e-149 525
WERAM-Lep-0023 LPERR02G07360.1 Leersia perrieri 60 3e-149 525
WERAM-Anp-0136 ENSAPLP00000014652.1 Anas platyrhynchos 61 7e-149 524
WERAM-Sus-0201 ENSSSCP00000023024.1 Sus scrofa 62 7e-149 524
WERAM-Pes-0020 ENSPSIP00000004435.1 Pelodiscus sinensis 60 3e-148 522
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 60 3e-148 522
WERAM-Cae-0005 C53A5.3 Caenorhabditis elegans 59 4e-148 521
WERAM-Gam-0033 ENSGMOP00000003469.1 Gadus morhua 61 7e-148 521
WERAM-Ict-0111 ENSSTOP00000011457.2 Ictidomys tridecemlineatus 60 8e-148 520
WERAM-Paa-0030 ENSPANP00000015145.1 Papio anubis 60 9e-148 520
WERAM-Mod-0165 ENSMODP00000022264.3 Monodelphis domestica 60 9e-148 520
WERAM-Fia-0139 ENSFALP00000011453.1 Ficedula albicollis 60 9e-148 520
WERAM-Orn-0087 ENSONIP00000009730.1 Oreochromis niloticus 60 1e-147 520
WERAM-Leo-0014 ENSLOCP00000002993.1 Lepisosteus oculatus 62 1e-147 520
WERAM-Pof-0067 ENSPFOP00000005770.2 Poecilia formosa 60 1e-147 520
WERAM-Scs-0023 EDO03342 Sclerotinia sclerotiorum 59 2e-147 520
WERAM-Dar-0035 ENSDARP00000051798.4 Danio rerio 60 2e-147 519
WERAM-Gaa-0072 ENSGACP00000009568.1 Gasterosteus aculeatus 62 2e-147 519
WERAM-Tar-0085 ENSTRUP00000016627.1 Takifugu rubripes 59 3e-147 519
WERAM-Orla-0151 ENSORLP00000017757.1 Oryzias latipes 60 4e-147 518
WERAM-Asm-0120 ENSAMXP00000012237.1 Astyanax mexicanus 61 5e-147 518
WERAM-Xet-0037 ENSXETP00000011480.3 Xenopus tropicalis 61 6e-147 518
WERAM-Ten-0109 ENSTNIP00000012136.1 Tetraodon nigroviridis 59 6e-147 518
WERAM-Xim-0002 ENSXMAP00000000390.1 Xiphophorus maculatus 59 1e-146 517
WERAM-Fec-0127 ENSFCAP00000011581.3 Felis catus 63 4e-146 515
WERAM-Asni-0020 CADANGAP00005938 Aspergillus niger 56 3e-145 512
WERAM-Coi-0024 EAS33504 Coccidioides immitis 58 8e-145 510
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 57 1e-144 510
WERAM-Ere-0068 ENSEEUP00000005465.1 Erinaceus europaeus 60 3e-144 508
WERAM-Sah-0134 ENSSHAP00000014467.1 Sarcophilus harrisii 60 4e-144 508
WERAM-Asfu-0015 CADAFUAP00003503 Aspergillus fumigatus 56 4e-144 508
WERAM-Ved-0020 EGY15146 Verticillium dahliae 54 5e-144 508
WERAM-Asn-0024 CADANIAP00005952 Aspergillus nidulans 57 6e-144 508
WERAM-Trv-0003 EHK19072 Trichoderma virens 57 5e-143 504
WERAM-Asc-0037 CADACLAP00008612 Aspergillus clavatus 56 1e-142 504
WERAM-Trr-0017 EGR48353 Trichoderma reesei 55 2e-142 503
WERAM-Map-0015 MAPG_05105T0 Magnaporthe poae 57 3e-142 502
WERAM-Gag-0026 GGTG_08607T0 Gaeumannomyces graminis 57 9e-142 500
WERAM-Mao-0017 MGG_05857T0 Magnaporthe oryzae 57 1e-141 500
WERAM-Osl-0002 ABO94711 Ostreococcus lucimarinus 58 1e-141 500
WERAM-Kop-0004 CAY67954 Komagataella pastoris 55 3e-141 499
WERAM-Caa-0018 KGT69072 Candida albicans 54 3e-141 499
WERAM-Sac-0039 YNL330C Saccharomyces cerevisiae 56 3e-141 499
WERAM-Cag-0003 CAG57932 Candida glabrata 55 2e-140 496
WERAM-Caj-0052 ENSCJAP00000008409.2 Callithrix jacchus 60 3e-140 495
WERAM-Tas-0085 ENSTSYP00000008588.1 Tarsius syrichta 59 7e-140 494
WERAM-Ora-0034 ENSOANP00000005760.2 Ornithorhynchus anatinus 60 8e-140 494
WERAM-Chg-0005 EAQ93036 Chaetomium globosum 54 9e-140 494
WERAM-Scj-0003 EEB05565 Schizosaccharomyces japonicus 56 1e-139 493
WERAM-Cym-0014 CMJ129CT Cyanidioschyzon merolae 57 2e-139 493
WERAM-Prc-0059 ENSPCAP00000005589.1 Procavia capensis 60 6e-139 491
WERAM-Kll-0018 CAG99124 Kluyveromyces lactis 58 7e-139 491
WERAM-Asg-0034 AAS54885 Ashbya gossypii 54 8e-139 491
WERAM-Yal-0022 CAG79885 Yarrowia lipolytica 57 2e-138 489
WERAM-Lab-0002 EDR16061 Laccaria bicolor 58 4e-138 488
WERAM-Scp-0033 SPBC36.05c.1:pep Schizosaccharomyces pombe 57 7e-138 488
WERAM-Nec-0007 EFNCRP00000000997 Neurospora crassa 59 1e-137 487
WERAM-Spr-0005 CBQ70764 Sporisorium reilianum 57 1e-137 486
WERAM-Vip-0012 ENSVPAP00000001394.1 Vicugna pacos 65 4e-137 485
WERAM-Lem-0026 CBX91288 Leptosphaeria maculans 56 5e-137 485
WERAM-Phn-0005 SNOT_00508 Phaeosphaeria nodorum 58 9e-137 484
WERAM-Miv-0036 MVLG_05319T0 Microbotryum violaceum 56 1e-136 483
Created Date 25-Jun-2016