WERAM Information

Tag Content
WERAM ID WERAM-Sob-0082
Ensembl Protein ID Sb05g006480.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb05g006480 Sb05g006480.1 Sb05g006480.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 2.20e-82 278 34 354
Organism Sorghum bicolor
Domain Profile
  HDAC Class-I
    class-1.txt  3 vayaydedvg.eyhygqkhpmkpkrlsltheLvlnygls 40
                   v+y+  ++ + ++ ++ +h m+p+r+s+th L+ +yg  
  Sb05g006480.1 34 VCYYTTTHASpTLTTARQHEMVPHRVSMTHALINAYGRL 72
                   666666554425677899******************865 PP
    class-1.txt  87 nvgedcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafytt 182
                     v ++ Pv+d+l++yc+ ++G+sl+aa+ L +++ ++ainw+GG+hh+   +a GfcyvnDiv         ++rvly+di+ hhGDgv+ af   
  Sb05g006480.1 142 CVTNENPVIDNLWDYCRRYAGGSLAAARALASGKYKVAINWSGGMHHVCEGKAGGFCYVNDIV---------FRRVLYLDINAHHGDGVKTAFVDD 228
                    578899********************************************************9.........68********************** PP
    class-1.txt 183 drvmtvsfhkygeeffPgtGdlsdvgaekgkyy..avnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghae 276
                    +rv   sfh+++ effP tG   dvg +++      +nvPl+ g +D +y+++f +v+++v+ +feP+avv+qcGaDslagD l++  ls++gha+
  Sb05g006480.1 229 SRV---SFHQFDGEFFPRTGAAVDVGGGDNGVCptLINVPLQVGTRDGRYHQLFAPVVDRVMAVFEPDAVVMQCGADSLAGDWLASLGLSVRGHAK 321
                    995...9******************998886642279*********************************************************** PP
    class-1.txt 277 cvkfvksfnlpllvlGGGGYtlrnvaRcwtyet 309
                    cv++vk + lpll+lGGGGYt++ va cw+ye 
  Sb05g006480.1 322 CVRIVKGYGLPLLLLGGGGYTINHVASCWCYEV 354
                    *******************************96 PP
Protein Sequence
(Fasta)		MGKRRSEHPQ APPLPPEPCA GDDGGGGVTK QKSVCYYTTT HASPTLTTAR QHEMVPHRVS 60
MTHALINAYG RLARRHGPSP RRAGHRARPP ASSSPMTQTY QIPPRPHAAP ADYYDATGAK 120
TRRREAAEGY NLGEVWNERA RCVTNENPVI DNLWDYCRRY AGGSLAAARA LASGKYKVAI 180
NWSGGMHHVC EGKAGGFCYV NDIVFRRVLY LDINAHHGDG VKTAFVDDSR VSFHQFDGEF 240
FPRTGAAVDV GGGDNGVCPT LINVPLQVGT RDGRYHQLFA PVVDRVMAVF EPDAVVMQCG 300
ADSLAGDWLA SLGLSVRGHA KCVRIVKGYG LPLLLLGGGG YTINHVASCW CYEVRTYSLL 360
TIDSSHGSN 369
Nucleotide Sequence
(Fasta)		ATGGGAAAAC GGAGAAGCGA GCACCCGCAG GCGCCGCCGC TGCCACCGGA GCCATGCGCC 60
GGCGACGACG GCGGCGGCGG CGTCACCAAG CAGAAGAGCG TGTGCTACTA TACTACGACC 120
CACGCATCTC CTACATTGAC TACGGCGAGA CAACACGAGA TGGTGCCTCA CCGTGTCTCC 180
ATGACGCACG CGCTCATCAA CGCCTACGGC CGGCTTGCTC GACGACATGG ACCGTCTCCG 240
CGTCGCGCCG GCCACCGAGC AAGACCTCCA GCTTCCAGCT CGCCCATGAC CCAGACTTAT 300
CAGATTCCTC CGCGACCTCA CGCCGCGCCC GCCGACTACT ACGACGCCAC CGGCGCCAAG 360
ACGCGGAGGA GAGAAGCCGC CGAGGGATAC AATCTCGGCG AGGTCTGGAA CGAGCGCGCC 420
CGCTGTGTCA CCAACGAGAA CCCCGTCATC GACAACCTCT GGGATTACTG CCGGCGCTAC 480
GCCGGCGGGT CGCTGGCGGC GGCGCGCGCC CTCGCCAGCG GCAAGTACAA GGTCGCCATC 540
AACTGGTCGG GCGGCATGCA CCACGTGTGC GAGGGCAAGG CCGGCGGGTT CTGCTACGTG 600
AACGACATCG TGTTCCGGCG GGTGCTGTAC CTGGACATCA ACGCGCACCA CGGCGACGGC 660
GTCAAGACCG CGTTCGTGGA CGACAGCCGG GTGTCGTTCC ACCAGTTCGA CGGCGAGTTC 720
TTCCCGCGCA CCGGCGCCGC CGTGGACGTC GGTGGCGGCG ATAATGGCGT GTGCCCTACT 780
CTGATCAACG TGCCGCTGCA GGTGGGAACG CGCGACGGGC GGTACCACCA GCTGTTCGCG 840
CCGGTCGTGG ACAGGGTGAT GGCCGTGTTC GAGCCGGACG CCGTCGTAAT GCAGTGCGGC 900
GCCGACTCGC TCGCCGGCGA CTGGCTGGCG AGCCTGGGCC TGTCTGTGCG TGGCCACGCC 960
AAGTGCGTCC GCATCGTCAA GGGTTACGGC TTGCCGTTGC TCCTCCTGGG CGGCGGTGGC 1020
TACACCATCA ACCATGTCGC CTCCTGCTGG TGCTACGAGG TACGTACATA CTCTTTGTTA 1080
ACTATAGATA GTAGTCACGG TTCAAATTAA 1111
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sei-0016 Si003826m Setaria italica 64 6e-62 235
WERAM-Lep-0007 LPERR01G17850.1 Leersia perrieri 48 9e-62 234
WERAM-Orp-0006 OPUNC01G21000.1 Oryza punctata 49 3e-61 233
WERAM-Aet-0080 EMT05969 Aegilops tauschii 49 2e-60 229
WERAM-Orni-0005 ONIVA01G23540.1 Oryza nivara 51 2e-58 223
WERAM-Ori-0005 BGIOSGA001330-PA Oryza indica 51 4e-58 222
WERAM-Orm-0006 OMERI01G19130.1 Oryza meridionalis 50 1e-57 221
WERAM-Orgl-0006 OGLUM01G24610.1 Oryza glumaepatula 51 3e-57 219
WERAM-Orb-0005 OBART01G20930.1 Oryza barthii 51 3e-57 219
WERAM-Orr-0006 ORUFI01G23650.1 Oryza rufipogon 49 1e-56 217
WERAM-Brd-0084 BRADI3G44780.1 Brachypodium distachyon 52 2e-55 213
WERAM-Ors-0100 OS11T0200000-01 Oryza sativa 44 4e-51 199
WERAM-Orl-0006 KN538683.1_FGP175 Oryza longistaminata 44 2e-50 197
WERAM-Orn-0136 ENSONIP00000014285.1 Oreochromis niloticus 42 1e-47 187
WERAM-Orla-0197 ENSORLP00000022529.1 Oryzias latipes 41 2e-47 187
WERAM-Loa-0063 ENSLAFP00000004670.4 Loxodonta africana 41 2e-47 186
WERAM-Anc-0129 ENSACAP00000012046.2 Anolis carolinensis 41 3e-47 186
WERAM-Hos-0228 ENSP00000430432.1 Homo sapiens 41 3e-47 186
WERAM-Leo-0176 ENSLOCP00000020984.1 Lepisosteus oculatus 41 3e-47 186
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 41 3e-47 186
WERAM-Orc-0004 ENSOCUP00000000521.2 Oryctolagus cuniculus 41 3e-47 186
WERAM-Ict-0111 ENSSTOP00000011457.2 Ictidomys tridecemlineatus 41 3e-47 186
WERAM-Gaga-0137 ENSGALP00000024133.3 Gallus gallus 41 3e-47 186
WERAM-Paa-0030 ENSPANP00000015145.1 Papio anubis 41 3e-47 186
WERAM-Chs-0191 ENSCSAP00000011772.1 Chlorocebus sabaeus 41 3e-47 186
WERAM-Asm-0151 ENSAMXP00000014739.1 Astyanax mexicanus 41 4e-47 186
WERAM-Tag-0146 ENSTGUP00000012328.1 Taeniopygia guttata 41 4e-47 186
WERAM-Mod-0165 ENSMODP00000022264.3 Monodelphis domestica 41 4e-47 186
WERAM-Ova-0099 ENSOARP00000010190.1 Ovis aries 41 4e-47 186
WERAM-Mum-0029 ENSMUSP00000019911.7 Mus musculus 41 4e-47 186
WERAM-Fia-0139 ENSFALP00000011453.1 Ficedula albicollis 41 4e-47 186
WERAM-Mam-0073 ENSMMUP00000011716.2 Macaca mulatta 41 4e-47 186
WERAM-Myl-0035 ENSMLUP00000002835.2 Myotis lucifugus 41 4e-47 186
WERAM-Cap-0156 ENSCPOP00000012920.2 Cavia porcellus 41 4e-47 186
WERAM-Xim-0061 ENSXMAP00000005239.1 Xiphophorus maculatus 41 4e-47 186
WERAM-Ran-0006 ENSRNOP00000000742.6 Rattus norvegicus 41 4e-47 186
WERAM-Sus-0028 ENSSSCP00000004781.2 Sus scrofa 41 5e-47 186
WERAM-Mup-0118 ENSMPUP00000010193.1 Mustela putorius furo 41 5e-47 186
WERAM-Pof-0181 ENSPFOP00000015600.1 Poecilia formosa 41 6e-47 185
WERAM-Tar-0085 ENSTRUP00000016627.1 Takifugu rubripes 41 8e-47 184
WERAM-Pat-0155 ENSPTRP00000049696.3 Pan troglodytes 41 1e-46 184
WERAM-Dan-0143 ENSDNOP00000031144.1 Dasypus novemcinctus 41 1e-46 184
WERAM-Poa-0153 ENSPPYP00000018964.2 Pongo abelii 41 1e-46 184
WERAM-Aim-0151 ENSAMEP00000013919.1 Ailuropoda melanoleuca 41 1e-46 184
WERAM-Gog-0059 ENSGGOP00000005320.2 Gorilla gorilla 41 1e-46 184
WERAM-Nol-0145 ENSNLEP00000015855.1 Nomascus leucogenys 41 1e-46 184
WERAM-Xet-0037 ENSXETP00000011480.3 Xenopus tropicalis 40 2e-46 183
WERAM-Orbr-0024 OB02G17760.1 Oryza brachyantha 43 2e-46 183
WERAM-Art-0148 AT5G63110.1 Arabidopsis thaliana 44 2e-46 183
WERAM-Caf-0048 ENSCAFP00000006011.3 Canis familiaris 42 4e-46 182
WERAM-Vip-0012 ENSVPAP00000001394.1 Vicugna pacos 42 4e-46 182
WERAM-Sah-0134 ENSSHAP00000014467.1 Sarcophilus harrisii 42 4e-46 182
WERAM-Drm-0018 FBpp0073173 Drosophila melanogaster 41 4e-46 182
WERAM-Anp-0059 ENSAPLP00000006605.1 Anas platyrhynchos 42 4e-46 182
WERAM-Arl-0113 fgenesh2_kg.8__ 2309__ AT5G63110.1 Arabidopsis lyrata 43 4e-46 182
WERAM-Meg-0131 ENSMGAP00000014157.2 Meleagris gallopavo 42 4e-46 182
WERAM-Brr-0180 Bra035858.1-P Brassica rapa 43 4e-46 182
WERAM-Bro-0169 Bo9g017510.1 Brassica oleracea 43 5e-46 182
WERAM-Fec-0156 ENSFCAP00000015379.2 Felis catus 42 5e-46 182
WERAM-Otg-0113 ENSOGAP00000009863.2 Otolemur garnettii 42 5e-46 182
WERAM-Ere-0068 ENSEEUP00000005465.1 Erinaceus europaeus 42 5e-46 182
WERAM-Ten-0060 ENSTNIP00000007837.1 Tetraodon nigroviridis 41 5e-46 182
WERAM-Ptv-0152 ENSPVAP00000012567.1 Pteropus vampyrus 40 7e-46 181
WERAM-Ocp-0006 ENSOPRP00000000780.1 Ochotona princeps 40 9e-46 181
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 40 1e-45 181
WERAM-Tas-0085 ENSTSYP00000008588.1 Tarsius syrichta 41 1e-45 181
WERAM-Eqc-0125 ENSECAP00000014039.1 Equus caballus 42 1e-45 181
WERAM-Gaa-0093 ENSGACP00000012045.1 Gasterosteus aculeatus 40 2e-45 180
WERAM-Mae-0030 ENSMEUP00000002192.1 Macropus eugenii 42 2e-45 180
WERAM-Caj-0052 ENSCJAP00000008409.2 Callithrix jacchus 42 2e-45 180
WERAM-Pes-0022 ENSPSIP00000004737.1 Pelodiscus sinensis 42 2e-45 180
WERAM-Sem-0128 EFJ38890 Selaginella moellendorffii 41 2e-45 180
WERAM-Dar-0035 ENSDARP00000051798.4 Danio rerio 40 2e-45 180
WERAM-Ora-0034 ENSOANP00000005760.2 Ornithorhynchus anatinus 42 3e-45 179
WERAM-Gam-0211 ENSGMOP00000020496.1 Gadus morhua 40 4e-45 179
WERAM-Glm-0036 GLYMA04G36090.1 Glycine max 43 6e-45 178
WERAM-Thc-0026 EOX98961 Theobroma cacao 41 1e-44 177
WERAM-Tut-0167 ENSTTRP00000014262.1 Tursiops truncatus 40 1e-44 177
WERAM-Chr-0011 EDP01149 Chlamydomonas reinhardtii 40 2e-44 177
WERAM-Viv-0108 VIT_17s0000g09070.t01 Vitis vinifera 39 3e-44 176
WERAM-Pug-0005 EFP76878 Puccinia graminis 42 3e-44 176
WERAM-Zem-0091 GRMZM2G163572_P01 Zea mays 41 4e-44 176
WERAM-Sol-0053 Solyc03g112410.1.1 Solanum lycopersicum 41 4e-44 176
WERAM-Met-0119 KEH27301 Medicago truncatula 43 5e-44 175
WERAM-Prp-0060 EMJ10303 Prunus persica 42 5e-44 175
WERAM-Sot-0088 PGSC0003DMT400076252 Solanum tuberosum 42 6e-44 175
WERAM-Pot-0051 POPTR_0004s21950.1 Populus trichocarpa 38 7e-44 175
WERAM-Amt-0016 ERM94967 Amborella trichopoda 42 7e-44 175
WERAM-Tra-0253 Traes_6AS_5CF7CCD9E.1 Triticum aestivum 40 8e-44 174
WERAM-Mua-0114 GSMUA_Achr8P04190_001 Musa acuminata 51 9e-44 174
WERAM-Hov-0099 MLOC_71091.1 Hordeum vulgare 40 1e-43 174
WERAM-Prc-0059 ENSPCAP00000005589.1 Procavia capensis 40 2e-43 173
WERAM-Php-0050 PP1S223_52V6.1 Physcomitrella patens 52 2e-43 173
WERAM-Mel-0028 EGG09787 Melampsora laricipopulina 40 3e-43 173
WERAM-Cii-0014 ENSCINP00000005410.3 Ciona intestinalis 40 5e-43 172
WERAM-Org-0090 ORGLA08G0103000.1 Oryza glaberrima 41 1e-42 171
WERAM-Lem-0026 CBX91288 Leptosphaeria maculans 38 5e-42 169
Created Date 25-Jun-2016