| Tag |
Content |
| WERAM ID |
WERAM-Zem-0091 |
| Ensembl Protein ID |
GRMZM2G163572_P01 |
| Gene Name |
Zm.971 |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
2.00e-163 |
545 |
23 |
333 |
|
| Organism |
Zea mays |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedc 92
++v+y+yd+dvg+y+ygq+hpmkp+r+++th+L+ ygl +++++++p+ as+++l++fh+++yi+fl++v+p++++e ++ lk+fnvgedc
GRMZM2G163572_P01 23 RRVCYYYDPDVGNYYYGQGHPMKPHRIRMTHSLLARYGLLNQMHVYRPSLASQRDLCRFHADDYIKFLRSVTPDTQQEQTRLLKRFNVGEDC 114
589***************************************************************************************** PP
class-1.txt 93 PvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdr 184
Pvfdgl+++cq+++Gas+ +a +Ln++ diainw+GGlhhakkseasG+cyvnDivlailellk+h+rvly+did+hhGDgveeafyttdr
GRMZM2G163572_P01 115 PVFDGLYSFCQTYAGASVGGAFRLNHG-HDIAINWSGGLHHAKKSEASGYCYVNDIVLAILELLKYHERVLYVDIDIHHGDGVEEAFYTTDR 205
************************997.59************************************************************** PP
class-1.txt 185 vmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghae 276
vmtvsfhk+g+ +fPgtGd++d+g+ kgkyy++n Pl+dgidDesy+++fk+++skv+e+f+P avvlqcGaDsl+gDrlg+fnlsi+ghae
GRMZM2G163572_P01 206 VMTVSFHKFGD-YFPGTGDIRDIGHSKGKYYSLNAPLDDGIDDESYQSLFKPIMSKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIRGHAE 296
***********.******************************************************************************** PP
class-1.txt 277 cvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
cv++++sfn+pll+lGGGGYt+rnvaRcw+yet+v+l
GRMZM2G163572_P01 297 CVRYMRSFNVPLLLLGGGGYTIRNVARCWCYETGVAL 333
**********************************986 PP
|
Protein Sequence
(Fasta) | MDPSSSGSGG NSLPSVGPDG QKRRVCYYYD PDVGNYYYGQ GHPMKPHRIR MTHSLLARYG 60
LLNQMHVYRP SLASQRDLCR FHADDYIKFL RSVTPDTQQE QTRLLKRFNV GEDCPVFDGL 120
YSFCQTYAGA SVGGAFRLNH GHDIAINWSG GLHHAKKSEA SGYCYVNDIV LAILELLKYH 180
ERVLYVDIDI HHGDGVEEAF YTTDRVMTVS FHKFGDYFPG TGDIRDIGHS KGKYYSLNAP 240
LDDGIDDESY QSLFKPIMSK VMEVFRPGAV VLQCGADSLS GDRLGCFNLS IRGHAECVRY 300
MRSFNVPLLL LGGGGYTIRN VARCWCYETG VALGQELEDK MPANEYYGYF APYYTLHVTP 360
SNMENKNTRH QLDDIRSKLL DNLRKLQHAP SVQFQERVPD TEVPDPDKDQ DDPDERHDPD 420
SDTEVDDNKA VEASARRSIL GMKVKREFGE NDTKVQVGME VKREFGGEND TKVQVGMKVK 480
RKFGENDTKV QDGGRVASEH RVLEPKAEDN GFSIQAPHVC ARAMAVDEPS NVKNEPEGN 539Protein Fasta Sequence
>GRMZM2G163572_P01|Class-I|Zea mays
MDPSSSGSGGNSLPSVGPDGQKRRVCYYYDPDVGNYYYGQGHPMKPHRIRMTHSLLARYGLLNQMHVYRPSLASQRDLCRFHADDYIKFLRSVTPDTQQEQTRLLKRFNVGEDCPVFDGLYSFCQTYAGASVGGAFRLNHGHDIAINWSGGLHHAKKSEASGYCYVNDIVLAILELLKYHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGHSKGKYYSLNAPLDDGIDDESYQSLFKPIMSKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVRYMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGQELEDKMPANEYYGYFAPYYTLHVTPSNMENKNTRHQLDDIRSKLLDNLRKLQHAPSVQFQERVPDTEVPDPDKDQDDPDERHDPDSDTEVDDNKAVEASARRSILGMKVKREFGENDTKVQVGMEVKREFGGENDTKVQVGMKVKRKFGENDTKVQDGGRVASEHRVLEPKAEDNGFSIQAPHVCARAMAVDEPSNVKNEPEGN |
Nucleotide Sequence
(Fasta) | AAAAGTAGAG CTGAAAAAGA AAAAATTCGG GACACGATAG TGCTCGATTT TCGTCTCACT 60
CACATCTCCC ATCGATCCAG CTCGCCCCCG CCCGTTTTCT CCTGAAAACA AAACGAAAGG 120
CTCCGCCATC CGGAAAAAAA AACCCCACAC AAAACCCATA CCCCCTGCGG CGGCGGCGAT 180
GGACCCGTCC TCGTCGGGCT CCGGCGGCAA CTCCCTCCCG TCCGTTGGCC CCGACGGACA 240
GAAGCGGCGC GTGTGCTACT ACTACGACCC GGATGTGGGC AACTACTACT ACGGGCAGGG 300
CCATCCGATG AAGCCGCACC GCATCCGGAT GACGCACTCG CTGCTGGCGC GCTACGGCCT 360
CCTCAACCAG ATGCATGTGT ACCGCCCCAG CCTGGCCAGC CAACGCGACC TCTGTCGCTT 420
CCACGCCGAC GACTACATCA AATTCCTGCG CTCCGTCACG CCCGACACGC AGCAGGAGCA 480
GACCCGCCTG CTCAAGCGCT TCAACGTCGG CGAGGACTGC CCCGTCTTCG ACGGCCTCTA 540
CAGCTTCTGC CAGACCTACG CGGGCGCCTC AGTCGGCGGG GCCTTCAGGC TCAACCACGG 600
CCACGACATT GCAATCAACT GGTCGGGCGG CCTGCACCAC GCCAAGAAGT CCGAGGCGTC 660
GGGCTACTGC TACGTCAACG ACATCGTGCT CGCCATACTC GAGCTGCTCA AGTACCACGA 720
GAGAGTTCTG TATGTCGACA TCGATATCCA TCATGGGGAT GGAGTGGAGG AGGCTTTCTA 780
CACAACAGAC AGGGTTATGA CCGTCTCGTT CCACAAGTTT GGGGACTATT TCCCAGGAAC 840
AGGGGATATC CGTGACATTG GGCATTCAAA GGGGAAGTAC TACTCCCTGA ATGCCCCTCT 900
AGATGATGGG ATTGATGATG AAAGTTACCA GTCCCTTTTC AAGCCAATCA TGAGCAAAGT 960
TATGGAGGTT TTCCGACCTG GCGCAGTTGT GCTTCAGTGT GGTGCTGATT CCTTATCTGG 1020
GGATAGGTTG GGCTGCTTCA ACCTCTCAAT CAGAGGTCAT GCAGAATGTG TTAGGTACAT 1080
GAGGTCTTTC AACGTACCAT TGTTGCTCCT TGGTGGGGGT GGATATACCA TAAGAAATGT 1140
TGCACGCTGT TGGTGCTATG AGACGGGAGT TGCTCTTGGC CAAGAGCTTG AAGATAAGAT 1200
GCCTGCCAAT GAGTATTATG GATACTTTGC TCCATATTAC ACTCTTCATG TCACACCAAG 1260
TAACATGGAG AACAAAAATA CACGACACCA ACTGGATGAT ATAAGATCAA AACTTCTTGA 1320
TAATCTTAGA AAACTTCAAC ATGCTCCTAG TGTCCAGTTT CAAGAGAGAG TTCCTGATAC 1380
AGAAGTACCT GATCCAGACA AAGATCAAGA TGATCCAGAT GAACGGCATG ATCCTGACTC 1440
TGATACGGAA GTGGATGATA ACAAGGCTGT GGAAGCGTCA GCGAGGAGGA GCATTCTAGG 1500
TATGAAAGTT AAGAGAGAAT TTGGTGAAAA TGATACCAAA GTACAGGTAG GTATGGAAGT 1560
TAAGAGAGAA TTTGGTGGTG AAAATGATAC CAAAGTACAG GTAGGTATGA AAGTTAAGAG 1620
AAAATTTGGT GAAAATGATA CCAAAGTACA GGATGGTGGC AGAGTTGCAT CTGAACATAG 1680
AGTACTGGAA CCCAAGGCAG AAGACAATGG TTTCTCCATT CAAGCTCCTC ATGTGTGTGC 1740
CAGGGCAATG GCTGTCGATG AGCCGAGCAA TGTTAAGAAT GAACCTGAGG GCAACTAAAC 1800
TGCAAGACCA AGCAGCTGCG CACCACAAAC CATAACTGCG GCATCAAGAC TTGCTGCCCA 1860
CAAACCATAC CGTGTTTTTA CAAGACAACT TCCTGCGTGC TTTGGACAGC CCAAAGACCA 1920
AAGTGAATCT GCAAAACGTT CCTGCCATTT CAAATTTGAC TTAGCTATAT GTTAGCACTA 1980
ATGATTACAT GACGGTAGTG AAGATTCCAA GAGAGCCCAC CTGGGATTGC TTGCGGTTTA 2040
CATTGACGGT AGTCTGACCC ATGTATACAT GAAGCCTATG AGTTGAGTTG TACAGCCATT 2100
AGTCAATGCA AATATGCAGT GAACGTGAGG GTAATTCTTT GCGTGTTCTT GATGTTTTTG 2160
ACCTTTTTTG GGCGCAACGC AAGCAAAGTA GGCAGTTGCT GTGCC
2206Nucleotide Fasta Sequence
>GRMZM2G163572_P01|Class-I|Zea mays
AAAAGTAGAGCTGAAAAAGAAAAAATTCGGGACACGATAGTGCTCGATTTTCGTCTCACTCACATCTCCCATCGATCCAGCTCGCCCCCGCCCGTTTTCTCCTGAAAACAAAACGAAAGGCTCCGCCATCCGGAAAAAAAAACCCCACACAAAACCCATACCCCCTGCGGCGGCGGCGATGGACCCGTCCTCGTCGGGCTCCGGCGGCAACTCCCTCCCGTCCGTTGGCCCCGACGGACAGAAGCGGCGCGTGTGCTACTACTACGACCCGGATGTGGGCAACTACTACTACGGGCAGGGCCATCCGATGAAGCCGCACCGCATCCGGATGACGCACTCGCTGCTGGCGCGCTACGGCCTCCTCAACCAGATGCATGTGTACCGCCCCAGCCTGGCCAGCCAACGCGACCTCTGTCGCTTCCACGCCGACGACTACATCAAATTCCTGCGCTCCGTCACGCCCGACACGCAGCAGGAGCAGACCCGCCTGCTCAAGCGCTTCAACGTCGGCGAGGACTGCCCCGTCTTCGACGGCCTCTACAGCTTCTGCCAGACCTACGCGGGCGCCTCAGTCGGCGGGGCCTTCAGGCTCAACCACGGCCACGACATTGCAATCAACTGGTCGGGCGGCCTGCACCACGCCAAGAAGTCCGAGGCGTCGGGCTACTGCTACGTCAACGACATCGTGCTCGCCATACTCGAGCTGCTCAAGTACCACGAGAGAGTTCTGTATGTCGACATCGATATCCATCATGGGGATGGAGTGGAGGAGGCTTTCTACACAACAGACAGGGTTATGACCGTCTCGTTCCACAAGTTTGGGGACTATTTCCCAGGAACAGGGGATATCCGTGACATTGGGCATTCAAAGGGGAAGTACTACTCCCTGAATGCCCCTCTAGATGATGGGATTGATGATGAAAGTTACCAGTCCCTTTTCAAGCCAATCATGAGCAAAGTTATGGAGGTTTTCCGACCTGGCGCAGTTGTGCTTCAGTGTGGTGCTGATTCCTTATCTGGGGATAGGTTGGGCTGCTTCAACCTCTCAATCAGAGGTCATGCAGAATGTGTTAGGTACATGAGGTCTTTCAACGTACCATTGTTGCTCCTTGGTGGGGGTGGATATACCATAAGAAATGTTGCACGCTGTTGGTGCTATGAGACGGGAGTTGCTCTTGGCCAAGAGCTTGAAGATAAGATGCCTGCCAATGAGTATTATGGATACTTTGCTCCATATTACACTCTTCATGTCACACCAAGTAACATGGAGAACAAAAATACACGACACCAACTGGATGATATAAGATCAAAACTTCTTGATAATCTTAGAAAACTTCAACATGCTCCTAGTGTCCAGTTTCAAGAGAGAGTTCCTGATACAGAAGTACCTGATCCAGACAAAGATCAAGATGATCCAGATGAACGGCATGATCCTGACTCTGATACGGAAGTGGATGATAACAAGGCTGTGGAAGCGTCAGCGAGGAGGAGCATTCTAGGTATGAAAGTTAAGAGAGAATTTGGTGAAAATGATACCAAAGTACAGGTAGGTATGGAAGTTAAGAGAGAATTTGGTGGTGAAAATGATACCAAAGTACAGGTAGGTATGAAAGTTAAGAGAAAATTTGGTGAAAATGATACCAAAGTACAGGATGGTGGCAGAGTTGCATCTGAACATAGAGTACTGGAACCCAAGGCAGAAGACAATGGTTTCTCCATTCAAGCTCCTCATGTGTGTGCCAGGGCAATGGCTGTCGATGAGCCGAGCAATGTTAAGAATGAACCTGAGGGCAACTAAACTGCAAGACCAAGCAGCTGCGCACCACAAACCATAACTGCGGCATCAAGACTTGCTGCCCACAAACCATACCGTGTTTTTACAAGACAACTTCCTGCGTGCTTTGGACAGCCCAAAGACCAAAGTGAATCTGCAAAACGTTCCTGCCATTTCAAATTTGACTTAGCTATATGTTAGCACTAATGATTACATGACGGTAGTGAAGATTCCAAGAGAGCCCACCTGGGATTGCTTGCGGTTTACATTGACGGTAGTCTGACCCATGTATACATGAAGCCTATGAGTTGAGTTGTACAGCCATTAGTCAATGCAAATATGCAGTGAACGTGAGGGTAATTCTTTGCGTGTTCTTGATGTTTTTGACCTTTTTTGGGCGCAACGCAAGCAAAGTAGGCAGTTGCTGTGCC
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
