| Tag |
Content |
| WERAM ID |
WERAM-Sei-0016 |
| Ensembl Protein ID |
Si003826m |
| Gene Name |
SETIT_003826mg |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
3.80e-98 |
329.9 |
1 |
292 |
|
| Organism |
Setaria italica |
| Domain Profile |
HDAC Class-I
class-1.txt 29 ltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenae...elskelkkfnvge...........dcPvfdglfeycqlitGaslea 112
+th+L+ +ygl ++++++ a+ e+l hseey+++l + p e ++k +++++ge d Pv+d++++yc ++G+sl+a
Si003826m 1 MTHHLINAYGLPDDMDLLRVAPATEEDLKVAHSEEYLDLLCHLMPAIYEnaaATQKAAQQHGLGEvrdrrtgcstnDNPVIDDIWDYCLCYAGGSLAA 98
89*************************************999988655533266688889999866666666666799******************** PP
class-1.txt 113 akkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvmtvsfhkyg.eeffPgtGdlsdvga 209
a+ L +++ +ainw+GG+hha +asGfcyv D v+ai ll + rvly+did hhGDgve af + +rvmtvsfh+y+ +ffPgtG
Si003826m 99 ARALASGRYRVAINWSGGMHHACEGKASGFCYVTDAVVAIKVLLGRFGRVLYVDIDAHHGDGVESAFLEQSRVMTVSFHQYDgRGFFPGTGG------ 190
*********************************************************************************7258*****95...... PP
class-1.txt 210 ekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwty 307
y a+nvPl+ g D++y+++f +++++v+++f+P+avvlqcG+DslagDr++ +ls++gha+cv++++s+++pll+lGGGGYt++ va cw+y
Si003826m 191 --ALYRALNVPLEAGTGDDEYHRLFGPIMERVMQVFRPDAVVLQCGTDSLAGDRITGLQLSVRGHAKCVHLIRSYDVPLLLLGGGGYTINHVASCWCY 286
..45889******************************************************************************************* PP
class-1.txt 308 etavvl 313
etav++
Si003826m 287 ETAVAI 292
***975 PP
|
Protein Sequence
(Fasta) | MTHHLINAYG LPDDMDLLRV APATEEDLKV AHSEEYLDLL CHLMPAIYEN AAATQKAAQQ 60
HGLGEVRDRR TGCSTNDNPV IDDIWDYCLC YAGGSLAAAR ALASGRYRVA INWSGGMHHA 120
CEGKASGFCY VTDAVVAIKV LLGRFGRVLY VDIDAHHGDG VESAFLEQSR VMTVSFHQYD 180
GRGFFPGTGG ALYRALNVPL EAGTGDDEYH RLFGPIMERV MQVFRPDAVV LQCGTDSLAG 240
DRITGLQLSV RGHAKCVHLI RSYDVPLLLL GGGGYTINHV ASCWCYETAV AIGKEIPDDI 300
PQYGFQRYYK SQGYKLHYYH DAHSSNSNDD ARTKRVTKVK QRVMAHLDHL AALMAAPSTQ 360
PDEEPACPAG REDPAERLHR RCGNLDLTEF LIDLGRKQLK RRNIDLELNC Protein Fasta Sequence
>Si003826m|Class-I|Setaria italica
MTHHLINAYGLPDDMDLLRVAPATEEDLKVAHSEEYLDLLCHLMPAIYENAAATQKAAQQHGLGEVRDRRTGCSTNDNPVIDDIWDYCLCYAGGSLAAARALASGRYRVAINWSGGMHHACEGKASGFCYVTDAVVAIKVLLGRFGRVLYVDIDAHHGDGVESAFLEQSRVMTVSFHQYDGRGFFPGTGGALYRALNVPLEAGTGDDEYHRLFGPIMERVMQVFRPDAVVLQCGTDSLAGDRITGLQLSVRGHAKCVHLIRSYDVPLLLLGGGGYTINHVASCWCYETAVAIGKEIPDDIPQYGFQRYYKSQGYKLHYYHDAHSSNSNDDARTKRVTKVKQRVMAHLDHLAALMAAPSTQPDEEPACPAGREDPAERLHRRCGNLDLTEFLIDLGRKQLKRRNIDLELNC |
Nucleotide Sequence
(Fasta) | ATGACGCACC ACCTCATCAA CGCCTACGGC CTGCCCGACG ACATGGACCT TCTCCGCGTG 60
GCACCGGCCA CCGAAGAGGA CCTCAAGGTC GCCCACAGCG AGGAGTACCT CGACCTCCTC 120
TGCCATCTCA TGCCGGCCAT CTACGAGAAC GCCGCCGCGA CCCAGAAAGC AGCCCAGCAG 180
CACGGGCTCG GCGAGGTCAG GGACAGGCGC ACCGGCTGCT CCACCAATGA CAACCCCGTC 240
ATCGACGACA TCTGGGACTA CTGCCTGTGC TACGCCGGCG GTTCCCTCGC GGCGGCGCGC 300
GCCCTCGCCA GCGGCAGGTA CCGAGTGGCC ATCAACTGGT CCGGCGGCAT GCACCACGCG 360
TGCGAGGGCA AGGCCAGCGG CTTCTGCTAC GTGACCGACG CCGTGGTCGC CATCAAGGTG 420
CTCCTCGGCC GATTCGGGCG CGTGCTGTAC GTGGACATCG ACGCGCACCA CGGCGACGGC 480
GTCGAGAGCG CCTTCCTGGA GCAGAGCCGG GTGATGACAG TGTCATTCCA CCAGTACGAC 540
GGCAGGGGGT TCTTCCCAGG CACCGGCGGC GCCCTGTACC GCGCGCTGAA CGTGCCGCTG 600
GAGGCGGGCA CGGGCGACGA CGAGTACCAC CGGCTGTTCG GGCCGATCAT GGAGAGGGTC 660
ATGCAGGTGT TCCGTCCGGA CGCCGTCGTG CTGCAGTGCG GCACTGACTC GCTCGCCGGC 720
GACCGGATCA CGGGCCTCCA GCTCTCCGTG CGCGGCCATG CCAAGTGTGT CCACCTCATC 780
CGCAGCTACG ACGTGCCGCT GCTGCTCCTC GGCGGCGGCG GCTACACCAT CAACCATGTC 840
GCCTCCTGCT GGTGCTACGA GACGGCGGTC GCCATTGGCA AGGAGATACC CGACGACATT 900
CCACAGTATG GGTTCCAGAG GTACTACAAG AGCCAGGGGT ACAAGCTCCA TTACTACCAT 960
GACGCACACA GTAGCAATAG CAACGACGAT GCGCGGACGA AACGCGTGAC CAAAGTAAAG 1020
CAGAGAGTCA TGGCGCATCT GGACCACCTG GCGGCGCTCA TGGCCGCGCC GAGCACGCAA 1080
CCCGACGAGG AGCCGGCCTG CCCTGCTGGG AGAGAAGACC CCGCGGAGAG GCTGCACCGG 1140
CGTTGCGGCA ACCTGGACCT CACCGAGTTC TTGATTGATC TAGGGAGGAA ACAACTCAAG 1200
CGAAGGAACA TCGATCTAGA ACTGAACTGC TGA
1234Nucleotide Fasta Sequence
>Si003826m|Class-I|Setaria italica
ATGACGCACCACCTCATCAACGCCTACGGCCTGCCCGACGACATGGACCTTCTCCGCGTGGCACCGGCCACCGAAGAGGACCTCAAGGTCGCCCACAGCGAGGAGTACCTCGACCTCCTCTGCCATCTCATGCCGGCCATCTACGAGAACGCCGCCGCGACCCAGAAAGCAGCCCAGCAGCACGGGCTCGGCGAGGTCAGGGACAGGCGCACCGGCTGCTCCACCAATGACAACCCCGTCATCGACGACATCTGGGACTACTGCCTGTGCTACGCCGGCGGTTCCCTCGCGGCGGCGCGCGCCCTCGCCAGCGGCAGGTACCGAGTGGCCATCAACTGGTCCGGCGGCATGCACCACGCGTGCGAGGGCAAGGCCAGCGGCTTCTGCTACGTGACCGACGCCGTGGTCGCCATCAAGGTGCTCCTCGGCCGATTCGGGCGCGTGCTGTACGTGGACATCGACGCGCACCACGGCGACGGCGTCGAGAGCGCCTTCCTGGAGCAGAGCCGGGTGATGACAGTGTCATTCCACCAGTACGACGGCAGGGGGTTCTTCCCAGGCACCGGCGGCGCCCTGTACCGCGCGCTGAACGTGCCGCTGGAGGCGGGCACGGGCGACGACGAGTACCACCGGCTGTTCGGGCCGATCATGGAGAGGGTCATGCAGGTGTTCCGTCCGGACGCCGTCGTGCTGCAGTGCGGCACTGACTCGCTCGCCGGCGACCGGATCACGGGCCTCCAGCTCTCCGTGCGCGGCCATGCCAAGTGTGTCCACCTCATCCGCAGCTACGACGTGCCGCTGCTGCTCCTCGGCGGCGGCGGCTACACCATCAACCATGTCGCCTCCTGCTGGTGCTACGAGACGGCGGTCGCCATTGGCAAGGAGATACCCGACGACATTCCACAGTATGGGTTCCAGAGGTACTACAAGAGCCAGGGGTACAAGCTCCATTACTACCATGACGCACACAGTAGCAATAGCAACGACGATGCGCGGACGAAACGCGTGACCAAAGTAAAGCAGAGAGTCATGGCGCATCTGGACCACCTGGCGGCGCTCATGGCCGCGCCGAGCACGCAACCCGACGAGGAGCCGGCCTGCCCTGCTGGGAGAGAAGACCCCGCGGAGAGGCTGCACCGGCGTTGCGGCAACCTGGACCTCACCGAGTTCTTGATTGATCTAGGGAGGAAACAACTCAAGCGAAGGAACATCGATCTAGAACTGAACTGCTGA
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
