class-2.txt   2 aglvydekmlkhqaleenkek.....hpEkpeRiqailsrlqea.gllekleelkarkatkeelqlvH.........seehvelletae.klekeele 83 
                  a++v+++++l+h +++e+++k     ++E+peR+ a+++ +++a +++++l++lk+++++k +l+++H         ++e++el+++a+ kl k e+e
      YPL116W  42 AVVVLSPYSLQHVFPREWVTKsyrktIVERPERLLASSMGISAAiTMYPSLFTLKSSHQRKGSLMAPHvlkvhgsswPAELIELCQMADaKLLKGEIE 139
                  789***************99999999****************999***************************************************** PP
  class-2.txt  84 s.ltvdsdsiylesksikaarlavGavlelvdkvlkgelkn.....gfavvRPPGHHaeestamGFClfnnvavaakllqqklkvkkilivDwDvHhG 175
                  + +t++s++iyl+sk+ika++ ++Ga+ + vd+++kg +       +f+++RPPGHH+++ t++GFCl+nn++va+++++++++v++++++D+D+HhG
      YPL116W 140 VpDTWNSGDIYLSSKTIKALQGTIGAIETGVDSIFKGPSAEhisnrAFVAIRPPGHHCHYGTPSGFCLLNNAHVAIEYAYDTYNVTHVVVLDFDLHHG 237
                  989**********************************993334668**************************************************** PP
  class-2.txt 176 nGtqeifykd........................pkvlylSlHRydkgsffpesgsgavdevgegkge...gfnvNvawnggl...mgdaeylaafr. 242
                  +Gtq+i++k                         pkv y+S+H  d +sf++esg+++++++++++++   ++++N+ wn++l   ++++e+++++r 
      YPL116W 238 DGTQDICWKRagfkpeeepedssyddfgkkfaefPKVGYFSMH--DINSFPTESGFATKENIKNASTCimnSHDLNI-WNIHLskwTTEEEFNVLYRt 332
                  *********889*******************************..**********************99999*****.*****999***********9 PP
  class-2.txt 243 ..evvlpiakeF............kP..dlvlvsaGfDaaeg..dplgglsvtakc..yatltkqllkl....aggrvvlvlEGGynlkaiaeaveav 316
                    ++++++a+eF            +P  +lv++saGfDa+e+  ++++++sv++ +  y+t+tk++lkl    ++g+v++++EGGy++kai+++v+a+
      YPL116W 333 kyRTLFAKADEFfrsaklemnqqgRPfkGLVVISAGFDASEFeqTSMQRHSVNVPTsfYTTFTKDALKLaqmhCHGKVLSLMEGGYSDKAICSGVFAH 430
                  999*********************9999**************999********99999***********999************************** PP
  class-2.txt 317 vkaLlg 322
                  + +L++
      YPL116W 431 LIGLQN 436
                  **9985 PP

  class-1.txt 132 hhakkseasGfcyvnDivlailellk..khkrvlyididlhhGDgveea 178
                  hh +    sGfc +n+  +ai       +  +v+ +d+dlhhGDg ++ 
      YPL116W 195 HHCHYGTPSGFCLLNNAHVAIEYAYDtyNVTHVVVLDFDLHHGDGTQDI 243
                  9********************998873345699************9985 PP
  class-1.txt  35 lnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnv 88 
                   n  ++k+l+  kp++++++e  + +s+  ++ l++ +   +++++  +++f+ 
      YPL116W 530 SNASPEKELHENKPRSTEKQEQREIRSDTKVKQLSSNNRAAETQIPFLQQEFSS 583
                  45667899999***********************99998888877766666665 PP