WERAM Information


Tag Content
WERAM ID WERAM-Cap-0062
Ensembl Protein ID ENSCPOP00000004924.2
Gene Name HDAC9
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSCPOG00000005468.3 ENSCPOT00000005527.2 ENSCPOP00000004924.2
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 9.00e-145 481.8 48 973
HDAC Class-I 7.70e-32 111.1 48 942
Organism Cavia porcellus
Domain Profile
  HDAC Class-II

           class-2.txt 32 ailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeele 83
+ l +q+++ ++k + +++ ++++e+l+ H++++ e+++ +++l + +
ENSCPOP00000004924.2 48 QELLLIQQQQQIQKQLLIAEFQKQHENLTRQHQAQLQEHIKLQQELLAIKQQ 99
4445566666666667777777777777777766666666555543333222 PP
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeeles...... 84
+g+ yd+ mlkhq++++n+++hpE+++Riq+i+srlqe+gll+k+e++++rka++ee+qlvHse+h l++t+ +l+ ++l+
ENSCPOP00000004924.2 632 TGIAYDPLMLKHQCICGNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQLVHSEHHSLLYGTS-PLDGQKLDPrillgd 719
789*********************************************************************9.*************** PP
class-2.txt 85 .............ltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqkl 160
l+vdsd+i++e +s+ aar+avG+v+el++kv++gelkngfavvRPPGHHaees+amGFC+fn+va++ak+l+++l
ENSCPOP00000004924.2 720 dsqkffsslpcggLGVDSDTIWNELHSSGAARMAVGCVIELASKVASGELKNGFAVVRPPGHHAEESAAMGFCFFNSVAITAKYLRDQL 808
***************************************************************************************** PP
class-2.txt 161 kvkkilivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawnggl...mgdaeylaafrevvl 246
+++kilivD+DvHhGnGtq++fy dp++ly+SlHRyd+g+ffp gsga++evg+g geg+n+N+aw+ggl mgd eyl afr+vv+
ENSCPOP00000004924.2 809 NISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFP--GSGAPNEVGTGLGEGYNINIAWTGGLdppMGDVEYLEAFRTVVM 895
*******************************************..******************************************** PP
class-2.txt 247 piakeFkPdlvlvsaGfDaaeg..dplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322
p+akeF+P++vlvsaGfDa eg plgg++vtakc+++ltkql++l +grvvl+lEGG++l+ai++a+ea+v+aLlg
ENSCPOP00000004924.2 896 PVAKEFDPNMVLVSAGFDALEGhtPPLGGYKVTAKCFGHLTKQLMTLVDGRVVLALEGGHDLTAICDASEACVNALLG 973
**********************9889**************************************************96 PP

  HDAC Class-I

           class-1.txt 18 qkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhse 62
q+ ++++ ++ ++L+++ +++ ++++ ++a+ +e +k ++e
ENSCPOP00000004924.2 48 QELLLIQQQQQIQKQLLIAEFQKQHENLTRQHQAQLQEHIKLQQE 92
444444555555555555544555555555566665555555443 PP
class-1.txt 19 khpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenae............elskelkkfnvgedc.Pv 94
+hp r++ + + + + gl +k e+++ +kas ee++ +hse++ + ++ + ++ ++ ++l ++g d+ +
ENSCPOP00000004924.2 652 THPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQLVHSEHHSLLYGTSPLDGQKldprillgddsqKFFSSLPCGGLGVDSdTI 740
56666667777777777777777777777777777777777776654443333333333445544444333333333333455555236 PP
class-1.txt 95 fdglfey..cqlitGasleaakkLnkkead..iainwaGGlhhakkseasGfcyvnDivlailellk..khkrvlyididlhhGDgvee 177
++l++ +++ G +e a+k+ ++e + a+ G hha s a Gfc+ n + ++ l+ + +++l +d+d+hhG+g ++
ENSCPOP00000004924.2 741 WNELHSSgaARMAVGCVIELASKVASGELKngFAVVRPPG-HHAEESAAMGFCFFNSVAITAKYLRDqlNISKILIVDLDVHHGNGTQQ 828
6777764225677899999999999887661245554444.************************9944567***************** PP
class-1.txt 178 afyttdrvmtvsfhkyge.effPgtGdlsdvgaekgkyyavnvPlkdgid....DesyekifksviskvieafePeavvlqcGaDslag 261
afy+ ++ +s+h+y+e +ffPg+G ++vg++ g y +n+ + g+d D +y + f++v+ +v + f+P++v++ G D+l g
ENSCPOP00000004924.2 829 AFYADPSILYISLHRYDEgNFFPGSGAPNEVGTGLGEGYNINIAWTGGLDppmgDVEYLEAFRTVVMPVAKEFDPNMVLVSAGFDALEG 917
****************8746***********************998887655559********************************97 PP
class-1.txt 262 D..rlgefnlsikghaecvkfvksf 284
+lg ++++ k +++ k + +
ENSCPOP00000004924.2 918 HtpPLGGYKVTAKCFGHLTKQLMTL 942
6337*********999987765554 PP

Protein Sequence
(Fasta)
MHSMISSVDV KSEVPVGLEP ISPLDLRTDL RMMMPVVDPV VREKQLQQEL LLIQQQQQIQ 60
KQLLIAEFQK QHENLTRQHQ AQLQEHIKLQ QELLAIKQQQ ELLEKEQKLE QQRQEQEVER 120
HRREQQLPPL RGKDRGRERK RHRVSKPEAS KNSLLSKSAT KDTPTNGKNH SVSRHPKLWY 180
TAAHHTSLDQ SSPPLSGTSP SYKYTLPGTQ DAKDDFPLRK TASEPNLKVR SRLKQKVAER 240
RSSPLLRRKD GNVVTSFKKR MFEVTESSVS SSSPGSGPSS PNNGPTGNVT ENETSVLPPT 300
PHAEQLVSQQ RILIHEDSMN LLSLYTSPSL PNITLGLPAG SSQLNASNSL KEKQKCETQT 360
LRQGVPLPGQ YGGSIPTSSS HPHVTLEGKP NSSHQALLQH LLLKEQMRQQ KLLVAGGVPL 420
HPQSPLATKE RISPGIRGTH KLPRHRPLNR TQSAPLPQST LAQLVIQQQH QQFLEKQKQY 480
QQQIHMNKLL SKSIEQLKQP GRHLEEAEEE LQGDQAMQED RAPSSDNSTR SDSSACVDDT 540
LGQVGAVKVK EEPVDSDEDA QVQEMESGEQ AAFMQQVIGK DLAPGFVIKS PEPSAGSADP 600
EKPRLLSRTR SSPAAAILPR PTDRPRQPCS ATGIAYDPLM LKHQCICGNS TTHPEHAGRI 660
QSIWSRLQET GLLNKCERIQ GRKASLEEIQ LVHSEHHSLL YGTSPLDGQK LDPRILLGDD 720
SQKFFSSLPC GGLGVDSDTI WNELHSSGAA RMAVGCVIEL ASKVASGELK NGFAVVRPPG 780
HHAEESAAMG FCFFNSVAIT AKYLRDQLNI SKILIVDLDV HHGNGTQQAF YADPSILYIS 840
LHRYDEGNFF PGSGAPNEVG TGLGEGYNIN IAWTGGLDPP MGDVEYLEAF RTVVMPVAKE 900
FDPNMVLVSA GFDALEGHTP PLGGYKVTAK CFGHLTKQLM TLVDGRVVLA LEGGHDLTAI 960
CDASEACVNA LLGNE 975
Nucleotide Sequence
(Fasta)
ATGCACAGTA TGATCAGCTC AGTGGATGTG AAGTCAGAGG TTCCTGTGGG CCTGGAGCCC 60
ATCTCACCCC TAGACTTAAG GACAGACCTC AGGATGATGA TGCCAGTAGT GGACCCTGTC 120
GTCCGTGAGA AGCAGCTGCA GCAAGAGTTA CTTCTTATCC AGCAGCAGCA ACAAATCCAG 180
AAGCAGCTCC TGATAGCAGA GTTTCAGAAA CAGCACGAGA ACTTGACACG GCAGCACCAG 240
GCTCAGCTTC AGGAGCACAT CAAGTTGCAA CAGGAACTTC TAGCCATAAA ACAGCAACAA 300
GAACTCCTAG AAAAGGAGCA GAAGCTGGAG CAGCAGAGGC AAGAACAGGA AGTGGAGAGG 360
CATCGTAGAG AACAGCAGCT CCCTCCTCTC AGAGGCAAAG ACAGAGGACG AGAACGTAAG 420
AGGCACCGGG TAAGTAAGCC AGAAGCCTCC AAGAATTCCT TATTGAGTAA ATCAGCAACA 480
AAAGACACTC CAACTAATGG AAAAAATCAT TCCGTGAGCC GGCATCCCAA GCTCTGGTAC 540
ACGGCTGCCC ACCACACATC ATTGGATCAA AGCTCTCCAC CCCTTAGTGG AACATCTCCA 600
TCCTACAAAT ATACATTACC AGGAACCCAA GATGCCAAGG ATGATTTCCC TCTTCGAAAA 660
ACTGCCTCTG AGCCCAACTT GAAGGTGCGG TCCAGGTTAA AACAGAAAGT GGCAGAGAGG 720
AGAAGCAGCC CCTTACTCAG GCGGAAGGAT GGAAATGTTG TCACTTCATT CAAGAAGCGA 780
ATGTTTGAGG TGACAGAATC CTCAGTCAGC AGCAGTTCTC CAGGGTCTGG TCCCAGTTCA 840
CCAAACAATG GACCGACTGG AAATGTTACT GAAAATGAGA CTTCGGTTTT GCCCCCTACT 900
CCTCATGCTG AGCAACTGGT TTCACAGCAA CGCATTCTAA TTCATGAAGA TTCCATGAAC 960
CTGCTAAGTC TTTATACCTC TCCTTCTTTA CCCAACATTA CTTTGGGACT CCCAGCAGGG 1020
TCATCCCAGC TCAATGCTTC AAATTCTCTC AAAGAAAAGC AGAAGTGTGA GACACAGACA 1080
CTCAGGCAAG GTGTTCCCCT GCCTGGGCAG TACGGGGGCA GCATCCCAAC GTCTTCAAGC 1140
CATCCTCATG TGACTTTAGA GGGAAAGCCC AACAGCAGCC ACCAAGCTCT CCTGCAGCAT 1200
TTATTACTGA AAGAACAAAT GCGACAACAA AAGCTTCTTG TGGCCGGTGG AGTTCCTTTA 1260
CACCCGCAGT CTCCCTTGGC AACAAAAGAG AGAATTTCGC CGGGGATTAG AGGTACCCAC 1320
AAGTTGCCCC GTCACAGACC CCTGAATCGA ACCCAGTCTG CACCTTTGCC TCAAAGCACT 1380
TTGGCTCAGT TGGTCATTCA ACAGCAACAC CAGCAGTTCT TGGAGAAGCA GAAACAATAC 1440
CAGCAGCAGA TTCACATGAA CAAACTGCTT TCGAAATCTA TTGAACAACT GAAGCAACCG 1500
GGCAGGCACC TTGAGGAAGC AGAGGAAGAA CTTCAGGGGG ACCAGGCGAT GCAGGAAGAC 1560
AGAGCGCCCT CTAGTGACAA CAGCACTAGG AGCGACAGCA GTGCTTGTGT GGATGACACT 1620
CTGGGACAAG TTGGGGCTGT GAAGGTCAAG GAAGAACCAG TGGACAGTGA TGAAGATGCT 1680
CAGGTCCAGG AAATGGAATC TGGGGAGCAG GCTGCTTTTA TGCAACAGGT AATAGGCAAA 1740
GATTTAGCTC CAGGATTTGT AATTAAATCC CCGGAGCCCT CGGCGGGCTC GGCCGACCCG 1800
GAGAAGCCCC GGCTGCTCTC GCGGACGCGC TCCTCCCCTG CGGCCGCCAT CTTGCCCCGG 1860
CCCACGGACC GCCCCCGCCA GCCCTGCTCG GCAACCGGAA TTGCCTATGA CCCACTAATG 1920
CTGAAACACC AGTGCATCTG TGGCAATTCT ACCACCCACC CCGAGCATGC TGGACGAATA 1980
CAGAGCATCT GGTCACGGCT GCAAGAAACT GGGCTGCTAA ATAAATGTGA GCGAATTCAA 2040
GGTCGAAAAG CCAGCCTAGA GGAAATACAG CTTGTTCATT CTGAACATCA CTCACTGTTG 2100
TATGGCACCA GTCCCCTGGA TGGACAGAAG TTGGACCCCA GGATCCTCCT AGGTGATGAC 2160
TCTCAAAAGT TCTTTTCCTC ATTACCTTGT GGTGGACTTG GGGTGGACAG TGACACCATT 2220
TGGAATGAGC TGCACTCGTC CGGTGCTGCA CGCATGGCTG TTGGCTGTGT CATCGAGCTG 2280
GCTTCCAAAG TGGCCTCAGG AGAGCTGAAG AATGGATTCG CTGTTGTGAG GCCTCCAGGT 2340
CATCACGCTG AAGAATCCGC AGCCATGGGG TTCTGCTTTT TTAATTCAGT TGCAATTACC 2400
GCCAAATACT TGCGAGACCA ACTAAATATA AGCAAGATAT TGATTGTAGA TCTGGATGTT 2460
CACCATGGAA ACGGTACACA GCAGGCCTTT TATGCTGACC CCAGCATCCT GTATATTTCA 2520
CTCCATCGCT ATGATGAAGG GAACTTTTTC CCTGGCAGTG GAGCCCCAAA TGAGGTTGGC 2580
ACAGGCCTTG GAGAAGGATA TAATATAAAT ATTGCCTGGA CGGGTGGCCT TGATCCCCCT 2640
ATGGGAGATG TTGAGTACCT CGAAGCTTTC AGGACTGTTG TGATGCCTGT GGCCAAAGAG 2700
TTTGATCCAA ACATGGTCCT GGTTTCCGCT GGGTTTGATG CATTAGAAGG CCACACCCCT 2760
CCTCTAGGGG GGTACAAAGT GACAGCCAAA TGCTTTGGTC ATTTGACGAA GCAACTGATG 2820
ACACTGGTTG ATGGACGTGT GGTGTTAGCT TTAGAAGGAG GACATGATCT CACAGCGATT 2880
TGTGATGCCT CAGAAGCCTG TGTCAATGCC CTTCTAGGAA ATGAG 2926
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Nol-0183 ENSNLEP00000020216.1 Nomascus leucogenys 93 0.0 1538
WERAM-Mam-0095 ENSMMUP00000014626.2 Macaca mulatta 90 0.0 1535
WERAM-Pat-0158 ENSPTRP00000032389.5 Pan troglodytes 93 0.0 1533
WERAM-Hos-0016 ENSP00000410337.2 Homo sapiens 90 0.0 1533
WERAM-Loa-0142 ENSLAFP00000012719.4 Loxodonta africana 93 0.0 1533
WERAM-Caf-0031 ENSCAFP00000003650.3 Canis familiaris 93 0.0 1524
WERAM-Aim-0096 ENSAMEP00000008994.1 Ailuropoda melanoleuca 93 0.0 1521
WERAM-Caj-0009 ENSCJAP00000001947.2 Callithrix jacchus 93 0.0 1520
WERAM-Mup-0161 ENSMPUP00000013847.1 Mustela putorius furo 92 0.0 1516
WERAM-Eqc-0153 ENSECAP00000016533.1 Equus caballus 89 0.0 1510
WERAM-Poa-0162 ENSPPYP00000019901.2 Pongo abelii 92 0.0 1504
WERAM-Orc-0142 ENSOCUP00000012429.3 Oryctolagus cuniculus 91 0.0 1498
WERAM-Tas-0117 ENSTSYP00000012457.1 Tarsius syrichta 88 0.0 1466
WERAM-Tut-0166 ENSTTRP00000014151.1 Tursiops truncatus 84 0.0 1390
WERAM-Ran-0028 ENSRNOP00000071341.1 Rattus norvegicus 89 0.0 1390
WERAM-Gaga-0107 ENSGALP00000017619.4 Gallus gallus 83 0.0 1360
WERAM-Soa-0055 ENSSARP00000005400.1 Sorex araneus 86 0.0 1360
WERAM-Pes-0105 ENSPSIP00000013270.1 Pelodiscus sinensis 84 0.0 1359
WERAM-Ocp-0153 ENSOPRP00000015747.2 Ochotona princeps 83 0.0 1356
WERAM-Paa-0166 ENSPANP00000002081.1 Papio anubis 88 0.0 1342
WERAM-Bot-0044 ENSBTAP00000004971.5 Bos taurus 87 0.0 1338
WERAM-Ict-0021 ENSSTOP00000001380.2 Ictidomys tridecemlineatus 89 0.0 1337
WERAM-Ova-0102 ENSOARP00000010345.1 Ovis aries 87 0.0 1334
WERAM-Gog-0153 ENSGGOP00000013334.2 Gorilla gorilla 88 0.0 1334
WERAM-Ere-0042 ENSEEUP00000003697.1 Erinaceus europaeus 84 0.0 1328
WERAM-Fia-0119 ENSFALP00000010264.1 Ficedula albicollis 81 0.0 1328
WERAM-Anp-0079 ENSAPLP00000009519.1 Anas platyrhynchos 82 0.0 1313
WERAM-Mod-0016 ENSMODP00000001749.3 Monodelphis domestica 81 0.0 1300
WERAM-Myl-0074 ENSMLUP00000006040.2 Myotis lucifugus 88 0.0 1259
WERAM-Dio-0020 ENSDORP00000002354.1 Dipodomys ordii 84 0.0 1209
WERAM-Prc-0004 ENSPCAP00000000473.1 Procavia capensis 76 0.0 1204
WERAM-Leo-0108 ENSLOCP00000014009.1 Lepisosteus oculatus 70 0.0 1092
WERAM-Meg-0105 ENSMGAP00000010668.1 Meleagris gallopavo 75 0.0 1073
WERAM-Tag-0040 ENSTGUP00000002713.1 Taeniopygia guttata 74 0.0 988
WERAM-Vip-0084 ENSVPAP00000007862.1 Vicugna pacos 83 0.0 870
WERAM-Mim-0009 ENSMICP00000000769.1 Microcebus murinus 82 0.0 846
WERAM-Dar-0170 ENSDARP00000100072.2 Danio rerio 56 0.0 838
WERAM-Lac-0155 ENSLACP00000018356.1 Latimeria chalumnae 56 0.0 822
WERAM-Mum-0019 ENSMUSP00000102770.2 Mus musculus 56 0.0 820
WERAM-Ora-0108 ENSOANP00000020481.2 Ornithorhynchus anatinus 55 0.0 810
WERAM-Dan-0156 ENSDNOP00000017844.1 Dasypus novemcinctus 55 0.0 809
WERAM-Fec-0025 ENSFCAP00000002029.3 Felis catus 56 0.0 808
WERAM-Sus-0169 ENSSSCP00000025173.1 Sus scrofa 56 0.0 806
WERAM-Chs-0068 ENSCSAP00000002314.1 Chlorocebus sabaeus 55 0.0 804
WERAM-Xet-0035 ENSXETP00000010592.2 Xenopus tropicalis 54 0.0 782
WERAM-Xim-0214 ENSXMAP00000017502.1 Xiphophorus maculatus 54 0.0 777
WERAM-Anc-0099 ENSACAP00000009498.3 Anolis carolinensis 56 0.0 773
WERAM-Otg-0061 ENSOGAP00000004404.2 Otolemur garnettii 53 0.0 742
WERAM-Tub-0129 ENSTBEP00000014362.1 Tupaia belangeri 66 0.0 738
WERAM-Mae-0145 ENSMEUP00000015025.1 Macropus eugenii 52 0.0 734
WERAM-Pem-0041 ENSPMAP00000005402.1 Petromyzon marinus 50 0.0 727
WERAM-Asm-0146 ENSAMXP00000013789.1 Astyanax mexicanus 50 0.0 669
WERAM-Ptv-0048 ENSPVAP00000005230.1 Pteropus vampyrus 84 0.0 647
WERAM-Orla-0184 ENSORLP00000021264.2 Oryzias latipes 50 0.0 642
WERAM-Chh-0086 ENSCHOP00000009630.1 Choloepus hoffmanni 86 2e-179 627
WERAM-Orn-0072 ENSONIP00000007998.1 Oreochromis niloticus 73 6e-172 602
WERAM-Pof-0205 ENSPFOP00000017061.2 Poecilia formosa 72 4e-169 592
WERAM-Ten-0172 ENSTNIP00000017010.1 Tetraodon nigroviridis 73 5e-168 589
WERAM-Gaa-0053 ENSGACP00000006953.1 Gasterosteus aculeatus 73 3e-167 587
WERAM-Tar-0063 ENSTRUP00000012899.1 Takifugu rubripes 66 2e-166 583
WERAM-Ect-0082 ENSETEP00000009275.1 Echinops telfairi 81 1e-165 581
WERAM-Sah-0025 ENSSHAP00000002837.1 Sarcophilus harrisii 68 9e-157 551
WERAM-Gam-0063 ENSGMOP00000006368.1 Gadus morhua 66 1e-146 518
WERAM-Drm-0080 FBpp0290513 Drosophila melanogaster 61 8e-136 482
WERAM-Cii-0046 ENSCINP00000016829.3 Ciona intestinalis 52 8e-120 429
WERAM-Cae-0008 C10E2.3a Caenorhabditis elegans 52 7e-109 392
WERAM-Brr-0181 Bra035942.1-P Brassica rapa 44 2e-77 288
WERAM-Cis-0060 ENSCSAVP00000013851.1 Ciona savignyi 57 2e-77 288
WERAM-Bro-0168 Bo9g014470.1 Brassica oleracea 45 3e-77 288
WERAM-Php-0085 PP1S34_252V6.1 Physcomitrella patens 42 2e-74 278
WERAM-Sem-0022 EFJ08599 Selaginella moellendorffii 42 4e-74 277
WERAM-Sol-0055 Solyc03g115150.2.1 Solanum lycopersicum 42 5e-74 276
WERAM-Miv-0034 MVLG_04888T0 Microbotryum violaceum 41 2e-73 275
WERAM-Arl-0149 scaffold_802745.1 Arabidopsis lyrata 43 2e-73 275
WERAM-Lep-0079 LPERR07G18450.1 Leersia perrieri 42 3e-73 274
WERAM-Thc-0031 EOY22062 Theobroma cacao 43 4e-73 274
Created Date 25-Jun-2016