| Tag |
Content |
| WERAM ID |
WERAM-Lep-0007 |
| Ensembl Protein ID |
LPERR01G17850.1 |
| Gene Name |
|
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
3.40e-117 |
392.4 |
19 |
333 |
|
| Organism |
Leersia perrieri |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvg.edcP 93
++v+y+yd +++ yg++h+m+pkr++++h+Lv +ygl +++++++ a+ ++l+ fh y+ +l++ + ++ + ++ + g +d P
LPERR01G17850.1 19 RRVCYYYDAGIASADYGEHHVMVPKRVTMAHNLVSAYGLLGHMRRLRTAPATESDLAAFHDAGYLALLRSGAGDADRGVDAAGERGGGGfDDNP 112
589***********************************************************************999999877777666369** PP
class-1.txt 94 vfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvmt 187
fdgl++yc ++G+sl+aa+ L +++diainw+GG+hha +asGfcyvnDivlai ll ++rvly+d+d+hhGDgve af ++rvmt
LPERR01G17850.1 113 AFDGLWDYCLRYAGGSLAAARALAGDSSDIAINWSGGMHHACAGKASGFCYVNDIVLAIRALLGRFRRVLYVDVDVHHGDGVEAAFAGSSRVMT 206
********************************************************************************************** PP
class-1.txt 188 vsfhkygeeffPgtGdlsdvgaekg.kyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkf 280
vsfh++g++ffP +G+l+ vg++++ + +vnvPlk+g De+y+++f++++ +v+e+f+Peavv+qcGaDsl gDrlg+ +l+++gha+cv+f
LPERR01G17850.1 207 VSFHQHGDNFFPESGELKIVGKGQDeRCAVVNVPLKKGFGDEEYHQLFEPIMGRVMEVFDPEAVVMQCGADSLDGDRLGSLKLTLNGHAQCVSF 300
**********************986266789*************************************************************** PP
class-1.txt 281 vksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
++sfn pll+lGGGGYt++ va cw+ etav++
LPERR01G17850.1 301 LRSFNRPLLLLGGGGYTINHVASCWCNETAVAI 333
******************************975 PP
|
Protein Sequence
(Fasta) | MGGGGNSLAS TSCGDDKKRR VCYYYDAGIA SADYGEHHVM VPKRVTMAHN LVSAYGLLGH 60
MRRLRTAPAT ESDLAAFHDA GYLALLRSGA GDADRGVDAA GERGGGGFDD NPAFDGLWDY 120
CLRYAGGSLA AARALAGDSS DIAINWSGGM HHACAGKASG FCYVNDIVLA IRALLGRFRR 180
VLYVDVDVHH GDGVEAAFAG SSRVMTVSFH QHGDNFFPES GELKIVGKGQ DERCAVVNVP 240
LKKGFGDEEY HQLFEPIMGR VMEVFDPEAV VMQCGADSLD GDRLGSLKLT LNGHAQCVSF 300
LRSFNRPLLL LGGGGYTINH VASCWCNETA VAIGKDIPND IPKHGFDQFY QNHGYRLHYT 360
LSQGDKNKKN AKYVDVHKPS IDKLKQQVLE NLSKLKLEPV ASVQFEERGR SIDVDALYES 420
REDEESPSER LYRKCYLENK CRKQRRLR 448Protein Fasta Sequence
>LPERR01G17850.1|Class-I|Leersia perrieri
MGGGGNSLASTSCGDDKKRRVCYYYDAGIASADYGEHHVMVPKRVTMAHNLVSAYGLLGHMRRLRTAPATESDLAAFHDAGYLALLRSGAGDADRGVDAAGERGGGGFDDNPAFDGLWDYCLRYAGGSLAAARALAGDSSDIAINWSGGMHHACAGKASGFCYVNDIVLAIRALLGRFRRVLYVDVDVHHGDGVEAAFAGSSRVMTVSFHQHGDNFFPESGELKIVGKGQDERCAVVNVPLKKGFGDEEYHQLFEPIMGRVMEVFDPEAVVMQCGADSLDGDRLGSLKLTLNGHAQCVSFLRSFNRPLLLLGGGGYTINHVASCWCNETAVAIGKDIPNDIPKHGFDQFYQNHGYRLHYTLSQGDKNKKNAKYVDVHKPSIDKLKQQVLENLSKLKLEPVASVQFEERGRSIDVDALYESREDEESPSERLYRKCYLENKCRKQRRLR |
Nucleotide Sequence
(Fasta) | ATGGGCGGCG GCGGAAACTC GCTGGCGTCG ACGTCGTGCG GCGACGACAA GAAGCGGCGC 60
GTGTGCTACT ACTACGACGC CGGCATCGCC TCCGCCGACT ACGGCGAGCA CCACGTGATG 120
GTGCCGAAGC GCGTCACGAT GGCGCACAAC CTCGTCTCCG CCTACGGCCT CCTCGGCCAC 180
ATGCGCCGCC TCCGCACGGC CCCCGCCACC GAGTCCGACC TCGCGGCGTT CCACGACGCC 240
GGCTACCTCG CCCTCCTCCG CAGCGGCGCG GGCGATGCCG ACCGCGGCGT CGACGCCGCC 300
GGCGAGCGCG GCGGCGGCGG CTTCGACGAC AACCCGGCGT TCGACGGCCT CTGGGACTAC 360
TGCCTCCGCT ACGCCGGCGG CTCGCTCGCC GCTGCGCGCG CCCTCGCGGG GGATTCGTCC 420
GACATCGCCA TCAACTGGTC GGGAGGGATG CACCACGCGT GCGCCGGGAA GGCGAGCGGG 480
TTCTGCTACG TGAACGACAT CGTGCTCGCC ATCCGCGCGC TCCTGGGTCG GTTCCGCCGC 540
GTGCTCTACG TCGACGTCGA CGTGCACCAC GGCGACGGCG TGGAGGCGGC GTTCGCGGGG 600
TCGAGCCGCG TGATGACGGT GTCGTTCCAC CAGCACGGCG ACAATTTCTT CCCCGAGTCC 660
GGCGAGTTGA AGATCGTCGG GAAGGGGCAG GACGAGCGGT GCGCCGTGGT GAACGTGCCG 720
CTGAAGAAGG GGTTCGGCGA CGAGGAGTAC CACCAGCTGT TCGAGCCGAT CATGGGCAGG 780
GTGATGGAGG TGTTCGACCC GGAGGCCGTC GTGATGCAGT GCGGCGCCGA CTCCCTCGAC 840
GGCGACCGGC TCGGCAGTCT GAAACTGACA CTGAACGGCC ACGCGCAGTG CGTCAGCTTC 900
CTCCGCAGCT TCAACCGGCC GCTGCTCCTC CTCGGCGGCG GTGGCTACAC CATCAACCAC 960
GTCGCCTCCT GCTGGTGCAA CGAGACGGCG GTGGCCATTG GCAAGGATAT CCCGAACGAC 1020
ATACCGAAAC ATGGGTTCGA CCAGTTCTAC CAAAACCATG GGTACAGGCT CCATTACACG 1080
TTGTCCCAGG GAGACAAGAA CAAAAAGAAT GCGAAATACG TAGACGTGCA CAAGCCATCC 1140
ATAGACAAAC TCAAGCAGCA GGTCCTGGAG AACCTCTCCA AGCTGAAGCT GGAGCCGGTA 1200
GCGAGCGTGC AGTTCGAGGA GCGCGGCAGG AGCATCGACG TCGATGCCCT CTACGAGTCA 1260
AGAGAAGACG AGGAGAGCCC CTCGGAGAGG CTTTACCGGA AGTGCTACCT TGAGAATAAA 1320
TGTAGGAAGC AGCGTCGACT TCGGTGA
1348Nucleotide Fasta Sequence
>LPERR01G17850.1|Class-I|Leersia perrieri
ATGGGCGGCGGCGGAAACTCGCTGGCGTCGACGTCGTGCGGCGACGACAAGAAGCGGCGCGTGTGCTACTACTACGACGCCGGCATCGCCTCCGCCGACTACGGCGAGCACCACGTGATGGTGCCGAAGCGCGTCACGATGGCGCACAACCTCGTCTCCGCCTACGGCCTCCTCGGCCACATGCGCCGCCTCCGCACGGCCCCCGCCACCGAGTCCGACCTCGCGGCGTTCCACGACGCCGGCTACCTCGCCCTCCTCCGCAGCGGCGCGGGCGATGCCGACCGCGGCGTCGACGCCGCCGGCGAGCGCGGCGGCGGCGGCTTCGACGACAACCCGGCGTTCGACGGCCTCTGGGACTACTGCCTCCGCTACGCCGGCGGCTCGCTCGCCGCTGCGCGCGCCCTCGCGGGGGATTCGTCCGACATCGCCATCAACTGGTCGGGAGGGATGCACCACGCGTGCGCCGGGAAGGCGAGCGGGTTCTGCTACGTGAACGACATCGTGCTCGCCATCCGCGCGCTCCTGGGTCGGTTCCGCCGCGTGCTCTACGTCGACGTCGACGTGCACCACGGCGACGGCGTGGAGGCGGCGTTCGCGGGGTCGAGCCGCGTGATGACGGTGTCGTTCCACCAGCACGGCGACAATTTCTTCCCCGAGTCCGGCGAGTTGAAGATCGTCGGGAAGGGGCAGGACGAGCGGTGCGCCGTGGTGAACGTGCCGCTGAAGAAGGGGTTCGGCGACGAGGAGTACCACCAGCTGTTCGAGCCGATCATGGGCAGGGTGATGGAGGTGTTCGACCCGGAGGCCGTCGTGATGCAGTGCGGCGCCGACTCCCTCGACGGCGACCGGCTCGGCAGTCTGAAACTGACACTGAACGGCCACGCGCAGTGCGTCAGCTTCCTCCGCAGCTTCAACCGGCCGCTGCTCCTCCTCGGCGGCGGTGGCTACACCATCAACCACGTCGCCTCCTGCTGGTGCAACGAGACGGCGGTGGCCATTGGCAAGGATATCCCGAACGACATACCGAAACATGGGTTCGACCAGTTCTACCAAAACCATGGGTACAGGCTCCATTACACGTTGTCCCAGGGAGACAAGAACAAAAAGAATGCGAAATACGTAGACGTGCACAAGCCATCCATAGACAAACTCAAGCAGCAGGTCCTGGAGAACCTCTCCAAGCTGAAGCTGGAGCCGGTAGCGAGCGTGCAGTTCGAGGAGCGCGGCAGGAGCATCGACGTCGATGCCCTCTACGAGTCAAGAGAAGACGAGGAGAGCCCCTCGGAGAGGCTTTACCGGAAGTGCTACCTTGAGAATAAATGTAGGAAGCAGCGTCGACTTCGGTGA
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
