| Tag |
Content |
| WERAM ID |
WERAM-Fia-0139 |
| Ensembl Protein ID |
ENSFALP00000011453.1 |
| Gene Name |
HDAC2 |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
2.60e-175 |
582 |
10 |
321 |
|
| Organism |
Ficedula albicollis |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvg 89
kkv+y+yd d+g+y+ygq+hpmkp+r+++th+L+lnygl++k+ei++p+ka+aee++k+hs+eyi+fl++++p+n++e+sk++++fnvg
ENSFALP00000011453.1 10 KKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVG 98
589************************************************************************************** PP
class-1.txt 90 edcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveea 178
edcPvfdglfe+cql+tG+s+++a kLn++++d+a+nwaGGlhhakkseasGfcyvnDivlailellk+h+rvlyidid+hhGDgveea
ENSFALP00000011453.1 99 EDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 187
***************************************************************************************** PP
class-1.txt 179 fyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgef 267
fyttdrvmtvsfhkyge +fPgtGdl+d+ga+kgkyyavn+P++dgidDesy +ifk++iskv+e+++P+avvlqcGaDsl+gDrlg+f
ENSFALP00000011453.1 188 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCF 275
*****************.*********************************************************************** PP
class-1.txt 268 nlsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
nl++kgha+cv++vk+fnlpll+lGGGGYt+rnvaRcwtyetav+l
ENSFALP00000011453.1 276 NLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVAL 321
*******************************************987 PP
|
Protein Sequence
(Fasta) | MAYSQGGGKK KVCYYYDGDI GNYYYGQGHP MKPHRIRMTH NLLLNYGLYR KMEIYRPHKA 60
TAEEMTKYHS DEYIKFLRSI RPDNMSEYSK QMQRFNVGED CPVFDGLFEF CQLSTGGSVA 120
GAVKLNRQQT DMAVNWAGGL HHAKKSEASG FCYVNDIVLA ILELLKYHQR VLYIDIDIHH 180
GDGVEEAFYT TDRVMTVSFH KYGEYFPGTG DLRDIGAGKG KYYAVNFPMR DGIDDESYGQ 240
IFKPIISKVM EMYQPSAVVL QCGADSLSGD RLGCFNLTVK GHAKCVEVVK TFNLPLLMLG 300
GGGYTIRNVA RCWTYETAVA LDCEIPNELP YNDYFEYFGP DFKLHISPSN MTNQNTPEYM 360
EKIKQRLFEN LRMLPHAPGV QMQAIPEDAV HEDSGDEDGE DPDKRISIRA SDKRIACDEE 420
FSDSEDEGEG GRRNVADHKK GAKKARIEED KKETEDKKAD VKEEDKTKDS SGEKTDAKGA 480
KSEQLSNP 488Protein Fasta Sequence
>ENSFALP00000011453.1|Class-I|Ficedula albicollis
MAYSQGGGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEEFSDSEDEGEGGRRNVADHKKGAKKARIEEDKKETEDKKADVKEEDKTKDSSGEKTDAKGAKSEQLSNP |
Nucleotide Sequence
(Fasta) | CGGGCCCCAG CGCGGCGGAA AGCGCTGCGC GGTTGGGGAT GAGGCACCCG CGGCCGGTGC 60
TGGGGGGCGG CTGAGGGGCT TCGCCGCGGC CCTGGCGCCG AGCAGGGCCC GGGCCCGCTG 120
CGGCCCCGAG CGCGGGACTC CTCACTCCCG CTGCCGCCGC TGCCACTGAG GGAGACTGGG 180
CACCCACTGC GCGCATGCGC TACACGGCTC CGCCGAGGGG CGGGGATACA GCCCCGACGC 240
CCGCGGCGGA TCGTACCACT GCGCGCCATG GGGGTGGGCC AGAAAAGAGC CTTCTCCAAG 300
AATTCGCTAA TGAGGAATCC CTGATGGGTT CTTCACTGAC TTGTGTGTGT AAATAAGGGA 360
AGCTAGCACA GAAAAGCAGG AAGGAGTCCA CGTACCCTCG CGTGCGTGCT CCCTTCTTCC 420
TTCGTTCCCT CTCCTCCCTC CGTCGGCGGC GAATTGGGCG CGTCCCGCTA GCTGCCCCTC 480
CCGCTGCCGA GGGTCCGGCC CGTTCCCGCT GCTGGCGGTC CCGGCGTCGC GAGTTCCCGC 540
TCTCCCGCCC CCTCCTTCCC ACCCTCCGAG CCGGCTCCGC GCTCTCCTCG GCCTCCCGCT 600
CCCTGCCCAC GGCCCCGGCG CGGCAGCCCT ATGGCGTACA GTCAGGGCGG CGGCAAGAAG 660
AAAGTCTGCT ACTATTACGA CGGTGATATT GGAAACTATT ACTATGGACA AGGACATCCA 720
ATGAAGCCTC ATAGGATCCG AATGACTCAC AACTTGCTGC TAAACTATGG CTTGTACAGG 780
AAAATGGAAA TTTATCGACC CCACAAAGCA ACTGCTGAGG AAATGACCAA GTACCATAGT 840
GATGAATACA TCAAATTTCT CCGATCAATA AGACCTGACA ATATGTCTGA GTACAGCAAG 900
CAAATGCAGA GATTTAATGT TGGAGAAGAT TGTCCTGTAT TTGATGGCTT GTTTGAGTTT 960
TGTCAGCTGT CAACTGGAGG CTCTGTTGCT GGGGCAGTAA AATTGAACAG ACAACAAACA 1020
GACATGGCTG TCAATTGGGC TGGGGGACTT CACCATGCCA AGAAATCGGA GGCATCTGGT 1080
TTCTGTTATG TCAATGATAT TGTGCTTGCC ATCCTTGAGT TACTGAAGTA CCACCAAAGA 1140
GTGTTGTATA TTGATATTGA TATCCATCAC GGTGATGGTG TTGAAGAAGC ATTTTATACC 1200
ACAGATCGTG TCATGACAGT ATCATTCCAT AAGTATGGTG AATATTTTCC AGGCACGGGA 1260
GACCTTAGGG ACATTGGTGC TGGAAAAGGC AAATACTATG CTGTCAACTT TCCAATGAGG 1320
GATGGTATAG ATGATGAATC ATATGGACAG ATATTCAAAC CAATTATATC TAAAGTAATG 1380
GAGATGTACC AGCCCAGTGC TGTGGTATTG CAGTGTGGAG CAGATTCACT GTCTGGGGAC 1440
AGGCTGGGAT GCTTTAATCT TACTGTTAAA GGTCATGCTA AATGTGTGGA AGTTGTAAAG 1500
ACATTTAACT TGCCGTTGCT GATGTTAGGA GGAGGAGGCT ACACAATTCG TAATGTTGCT 1560
CGGTGCTGGA CATATGAAAC TGCTGTTGCC TTAGATTGTG AAATTCCTAA TGAGTTGCCA 1620
TACAATGACT ACTTTGAGTA TTTTGGACCA GACTTCAAGC TTCATATTAG TCCTTCAAAT 1680
ATGACTAATC AGAATACACC AGAATATATG GAGAAGATCA AGCAGCGCTT ATTTGAGAAC 1740
TTGCGCATGT TACCTCACGC ACCTGGTGTG CAGATGCAGG CCATTCCTGA AGATGCTGTT 1800
CATGAAGACA GTGGAGACGA GGATGGAGAA GATCCAGACA AGCGCATTTC TATTCGAGCA 1860
TCTGATAAGC GCATAGCCTG TGATGAAGAA TTTTCAGATT CTGAAGATGA AGGGGAAGGT 1920
GGACGACGAA ATGTTGCAGA TCATAAGAAG GGAGCGAAGA AAGCCAGAAT AGAAGAAGAC 1980
AAAAAAGAGA CTGAAGACAA AAAAGCAGAT GTTAAGGAGG AGGATAAAAC CAAGGACAGC 2040
AGTGGTGAAA AGACAGATGC CAAAGGAGCA AAATCAGAAC AGCTCAGCAA CCCTTGAACA 2100
AAAGATAGCC TCTCATCAGT TGCAGAACAT AATACTAGAG TCTGAGAATA CCTAAAAGGA 2160
GAAACGTTTT CGTATGGAGA GAGACTGCTG ATTTCATTTT GTACTATTTG GCATGGACTG 2220
TATTTATTTT CAAACGGCTT TGTTCTGTTT TTTGGCAAGT TGTATTGTGA GTTTTCTAAT 2280
TATGAGGCAG AAATTCCTTT CTTCACCATG CTTTATGTAA TAGTATTTAA AAATGGATGT 2340
GAGTTATTAT GTTAAATGTC TAAACTGATC TATTAAAGTA ATTTGCCTTT CCTGAGCTGA 2400
TTTTACCTTT TTTGTAATTT TATCTTTATT AAAAAAAAAA AAAATACATG GTT
2454Nucleotide Fasta Sequence
>ENSFALP00000011453.1|Class-I|Ficedula albicollis
CGGGCCCCAGCGCGGCGGAAAGCGCTGCGCGGTTGGGGATGAGGCACCCGCGGCCGGTGCTGGGGGGCGGCTGAGGGGCTTCGCCGCGGCCCTGGCGCCGAGCAGGGCCCGGGCCCGCTGCGGCCCCGAGCGCGGGACTCCTCACTCCCGCTGCCGCCGCTGCCACTGAGGGAGACTGGGCACCCACTGCGCGCATGCGCTACACGGCTCCGCCGAGGGGCGGGGATACAGCCCCGACGCCCGCGGCGGATCGTACCACTGCGCGCCATGGGGGTGGGCCAGAAAAGAGCCTTCTCCAAGAATTCGCTAATGAGGAATCCCTGATGGGTTCTTCACTGACTTGTGTGTGTAAATAAGGGAAGCTAGCACAGAAAAGCAGGAAGGAGTCCACGTACCCTCGCGTGCGTGCTCCCTTCTTCCTTCGTTCCCTCTCCTCCCTCCGTCGGCGGCGAATTGGGCGCGTCCCGCTAGCTGCCCCTCCCGCTGCCGAGGGTCCGGCCCGTTCCCGCTGCTGGCGGTCCCGGCGTCGCGAGTTCCCGCTCTCCCGCCCCCTCCTTCCCACCCTCCGAGCCGGCTCCGCGCTCTCCTCGGCCTCCCGCTCCCTGCCCACGGCCCCGGCGCGGCAGCCCTATGGCGTACAGTCAGGGCGGCGGCAAGAAGAAAGTCTGCTACTATTACGACGGTGATATTGGAAACTATTACTATGGACAAGGACATCCAATGAAGCCTCATAGGATCCGAATGACTCACAACTTGCTGCTAAACTATGGCTTGTACAGGAAAATGGAAATTTATCGACCCCACAAAGCAACTGCTGAGGAAATGACCAAGTACCATAGTGATGAATACATCAAATTTCTCCGATCAATAAGACCTGACAATATGTCTGAGTACAGCAAGCAAATGCAGAGATTTAATGTTGGAGAAGATTGTCCTGTATTTGATGGCTTGTTTGAGTTTTGTCAGCTGTCAACTGGAGGCTCTGTTGCTGGGGCAGTAAAATTGAACAGACAACAAACAGACATGGCTGTCAATTGGGCTGGGGGACTTCACCATGCCAAGAAATCGGAGGCATCTGGTTTCTGTTATGTCAATGATATTGTGCTTGCCATCCTTGAGTTACTGAAGTACCACCAAAGAGTGTTGTATATTGATATTGATATCCATCACGGTGATGGTGTTGAAGAAGCATTTTATACCACAGATCGTGTCATGACAGTATCATTCCATAAGTATGGTGAATATTTTCCAGGCACGGGAGACCTTAGGGACATTGGTGCTGGAAAAGGCAAATACTATGCTGTCAACTTTCCAATGAGGGATGGTATAGATGATGAATCATATGGACAGATATTCAAACCAATTATATCTAAAGTAATGGAGATGTACCAGCCCAGTGCTGTGGTATTGCAGTGTGGAGCAGATTCACTGTCTGGGGACAGGCTGGGATGCTTTAATCTTACTGTTAAAGGTCATGCTAAATGTGTGGAAGTTGTAAAGACATTTAACTTGCCGTTGCTGATGTTAGGAGGAGGAGGCTACACAATTCGTAATGTTGCTCGGTGCTGGACATATGAAACTGCTGTTGCCTTAGATTGTGAAATTCCTAATGAGTTGCCATACAATGACTACTTTGAGTATTTTGGACCAGACTTCAAGCTTCATATTAGTCCTTCAAATATGACTAATCAGAATACACCAGAATATATGGAGAAGATCAAGCAGCGCTTATTTGAGAACTTGCGCATGTTACCTCACGCACCTGGTGTGCAGATGCAGGCCATTCCTGAAGATGCTGTTCATGAAGACAGTGGAGACGAGGATGGAGAAGATCCAGACAAGCGCATTTCTATTCGAGCATCTGATAAGCGCATAGCCTGTGATGAAGAATTTTCAGATTCTGAAGATGAAGGGGAAGGTGGACGACGAAATGTTGCAGATCATAAGAAGGGAGCGAAGAAAGCCAGAATAGAAGAAGACAAAAAAGAGACTGAAGACAAAAAAGCAGATGTTAAGGAGGAGGATAAAACCAAGGACAGCAGTGGTGAAAAGACAGATGCCAAAGGAGCAAAATCAGAACAGCTCAGCAACCCTTGAACAAAAGATAGCCTCTCATCAGTTGCAGAACATAATACTAGAGTCTGAGAATACCTAAAAGGAGAAACGTTTTCGTATGGAGAGAGACTGCTGATTTCATTTTGTACTATTTGGCATGGACTGTATTTATTTTCAAACGGCTTTGTTCTGTTTTTTGGCAAGTTGTATTGTGAGTTTTCTAATTATGAGGCAGAAATTCCTTTCTTCACCATGCTTTATGTAATAGTATTTAAAAATGGATGTGAGTTATTATGTTAAATGTCTAAACTGATCTATTAAAGTAATTTGCCTTTCCTGAGCTGATTTTACCTTTTTTGTAATTTTATCTTTATTAAAAAAAAAAAAAATACATGGTT
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
