| Tag |
Content |
| WERAM ID |
WERAM-Orgl-0109 |
| Ensembl Protein ID |
OGLUM11G05650.1 |
| Gene Name |
|
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
1.60e-122 |
410.2 |
19 |
342 |
|
| Organism |
Oryza glumaepatula |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenae....els.kelkkfnvg 89
++v+y+yd+ +++++++++h+m+p r++++h+Lv yg+ ++++++++ a+ +e+ +fhs ey+++l +pe+ k ++++g
OGLUM11G05650.1 19 RRVCYYYDPGIAHIKFSDDHVMVPARVAMAHSLVGVYGMLGDMRRLRTRPATEAEIRRFHSPEYVDLLCDLTPESYAndaaL-RqKAEDHHGIG 111
589**********************************************************************987644431.22445556665 PP
class-1.txt 90 ..edcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyt 181
+dcP fd l++yc+ ++G+sl+aa+ L ++ +diainw+GG+hha ++a+GfcyvnDivlai ell +++rv+y+did hhGDgv++af
OGLUM11G05650.1 112 geDDCPAFDRLWKYCRGYAGGSLAAARALVDGASDIAINWSGGMHHASACKATGFCYVNDIVLAINELLGTFSRVIYVDIDAHHGDGVQNAFLD 205
227******************************************************************************************* PP
class-1.txt 182 tdrvmtvsfhkyge.....effPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnls 270
++rvmt+sfh+yg+ +ffPg+G ++++g + gk+y+vnvPl+ g++D+ y+++f++++ k +e+f+Pea+vlqcGaDsl+gDrlg +ls
OGLUM11G05650.1 206 SNRVMTLSFHRYGKitphkDFFPGSGAINEIGDGAGKHYSVNVPLDAGVRDDVYHTLFEPIVGKAMEVFQPEAIVLQCGADSLSGDRLGGMELS 299
************85444448************************************************************************** PP
class-1.txt 271 ikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
++ghaecv+f++ fnlpll+lGGGGYt++ va +w+yetav++
OGLUM11G05650.1 300 VRGHAECVSFLRGFNLPLLLLGGGGYTINHVASTWCYETAVAV 342
****************************************986 PP
|
Protein Sequence
(Fasta) | MATGGNSLPS PSCADDKKRR VCYYYDPGIA HIKFSDDHVM VPARVAMAHS LVGVYGMLGD 60
MRRLRTRPAT EAEIRRFHSP EYVDLLCDLT PESYANDAAL RQKAEDHHGI GGEDDCPAFD 120
RLWKYCRGYA GGSLAAARAL VDGASDIAIN WSGGMHHASA CKATGFCYVN DIVLAINELL 180
GTFSRVIYVD IDAHHGDGVQ NAFLDSNRVM TLSFHRYGKI TPHKDFFPGS GAINEIGDGA 240
GKHYSVNVPL DAGVRDDVYH TLFEPIVGKA MEVFQPEAIV LQCGADSLSG DRLGGMELSV 300
RGHAECVSFL RGFNLPLLLL GGGGYTINHV ASTWCYETAV AVGKEGELPD DIEIPSHGYE 360
LMYKNQGNKL HYQTSTATAA RKRSSSTEVT KGKVLEHLSQ VERAPSVQFQ ERRGGDNAAG 420
VELYYERPPS LEDDEPAQRL HRLCFPAVAK RIRLNA 456Protein Fasta Sequence
>OGLUM11G05650.1|Class-I|Oryza glumaepatula
MATGGNSLPSPSCADDKKRRVCYYYDPGIAHIKFSDDHVMVPARVAMAHSLVGVYGMLGDMRRLRTRPATEAEIRRFHSPEYVDLLCDLTPESYANDAALRQKAEDHHGIGGEDDCPAFDRLWKYCRGYAGGSLAAARALVDGASDIAINWSGGMHHASACKATGFCYVNDIVLAINELLGTFSRVIYVDIDAHHGDGVQNAFLDSNRVMTLSFHRYGKITPHKDFFPGSGAINEIGDGAGKHYSVNVPLDAGVRDDVYHTLFEPIVGKAMEVFQPEAIVLQCGADSLSGDRLGGMELSVRGHAECVSFLRGFNLPLLLLGGGGYTINHVASTWCYETAVAVGKEGELPDDIEIPSHGYELMYKNQGNKLHYQTSTATAARKRSSSTEVTKGKVLEHLSQVERAPSVQFQERRGGDNAAGVELYYERPPSLEDDEPAQRLHRLCFPAVAKRIRLNA |
Nucleotide Sequence
(Fasta) | ATGGCCACCG GGGGGAACTC GCTGCCGTCG CCGTCGTGCG CCGACGACAA GAAGCGGCGG 60
GTGTGCTACT ACTACGACCC CGGCATCGCC CACATCAAAT TCAGCGACGA CCATGTCATG 120
GTGCCCGCCC GCGTCGCCAT GGCGCACAGC CTCGTCGGCG TCTACGGCAT GCTCGGCGAC 180
ATGCGCCGCC TCCGCACGAG ACCCGCCACG GAGGCGGAGA TCCGCCGCTT CCACTCGCCG 240
GAGTACGTCG ACCTCCTCTG CGACCTCACC CCGGAGAGCT ACGCCAACGA CGCGGCGCTT 300
CGGCAGAAGG CGGAGGATCA CCACGGCATC GGCGGCGAAG ATGATTGCCC CGCCTTCGAC 360
CGCCTCTGGA AGTACTGCCG CGGCTACGCC GGCGGGTCGC TCGCCGCGGC GCGCGCGCTC 420
GTCGACGGCG CCTCCGACAT CGCCATCAAC TGGTCCGGCG GCATGCACCA CGCCTCCGCC 480
TGCAAGGCCA CCGGCTTCTG CTACGTCAAC GACATCGTGC TCGCCATCAA CGAGCTCCTC 540
GGCACCTTCA GCCGGGTCAT CTACGTCGAC ATCGACGCGC ACCACGGCGA CGGCGTGCAG 600
AACGCATTCT TGGACTCCAA CCGGGTCATG ACGCTGTCGT TCCACCGGTA CGGCAAAATC 660
ACGCCCCACA AGGACTTCTT CCCGGGCTCC GGCGCCATCA ACGAAATCGG CGACGGCGCC 720
GGCAAGCACT ACAGCGTGAA CGTGCCGCTG GACGCCGGCG TCCGCGACGA CGTGTACCAC 780
ACGCTGTTCG AGCCGATCGT GGGCAAGGCC ATGGAGGTGT TCCAGCCGGA GGCCATCGTG 840
CTGCAGTGCG GCGCCGACTC GCTCTCCGGC GACCGCCTCG GCGGCATGGA GCTATCGGTG 900
CGGGGCCACG CGGAGTGCGT CAGCTTCCTC CGCGGGTTCA ACCTGCCGCT GCTCCTCCTC 960
GGCGGCGGCG GCTACACCAT CAACCACGTC GCCTCCACGT GGTGCTACGA GACGGCGGTC 1020
GCCGTCGGCA AGGAGGGGGA GCTCCCCGAC GACATAGAGA TACCCAGCCA CGGCTACGAG 1080
CTCATGTACA AGAACCAGGG GAACAAGCTC CATTACCAGA CGTCGACAGC GACGGCGGCG 1140
AGAAAGAGGT CGAGCAGCAC GGAGGTCACC AAGGGGAAGG TGCTCGAGCA CCTGTCGCAG 1200
GTCGAGCGCG CGCCGAGCGT GCAGTTCCAG GAGCGACGCG GCGGCGACAA TGCCGCCGGA 1260
GTTGAGCTCT ACTACGAGCG CCCTCCGAGC CTGGAAGACG ACGAACCCGC GCAGAGGCTG 1320
CACCGCCTCT GCTTCCCCGC CGTGGCGAAG CGTATCAGGC TCAATGCCTG A
1372Nucleotide Fasta Sequence
>OGLUM11G05650.1|Class-I|Oryza glumaepatula
ATGGCCACCGGGGGGAACTCGCTGCCGTCGCCGTCGTGCGCCGACGACAAGAAGCGGCGGGTGTGCTACTACTACGACCCCGGCATCGCCCACATCAAATTCAGCGACGACCATGTCATGGTGCCCGCCCGCGTCGCCATGGCGCACAGCCTCGTCGGCGTCTACGGCATGCTCGGCGACATGCGCCGCCTCCGCACGAGACCCGCCACGGAGGCGGAGATCCGCCGCTTCCACTCGCCGGAGTACGTCGACCTCCTCTGCGACCTCACCCCGGAGAGCTACGCCAACGACGCGGCGCTTCGGCAGAAGGCGGAGGATCACCACGGCATCGGCGGCGAAGATGATTGCCCCGCCTTCGACCGCCTCTGGAAGTACTGCCGCGGCTACGCCGGCGGGTCGCTCGCCGCGGCGCGCGCGCTCGTCGACGGCGCCTCCGACATCGCCATCAACTGGTCCGGCGGCATGCACCACGCCTCCGCCTGCAAGGCCACCGGCTTCTGCTACGTCAACGACATCGTGCTCGCCATCAACGAGCTCCTCGGCACCTTCAGCCGGGTCATCTACGTCGACATCGACGCGCACCACGGCGACGGCGTGCAGAACGCATTCTTGGACTCCAACCGGGTCATGACGCTGTCGTTCCACCGGTACGGCAAAATCACGCCCCACAAGGACTTCTTCCCGGGCTCCGGCGCCATCAACGAAATCGGCGACGGCGCCGGCAAGCACTACAGCGTGAACGTGCCGCTGGACGCCGGCGTCCGCGACGACGTGTACCACACGCTGTTCGAGCCGATCGTGGGCAAGGCCATGGAGGTGTTCCAGCCGGAGGCCATCGTGCTGCAGTGCGGCGCCGACTCGCTCTCCGGCGACCGCCTCGGCGGCATGGAGCTATCGGTGCGGGGCCACGCGGAGTGCGTCAGCTTCCTCCGCGGGTTCAACCTGCCGCTGCTCCTCCTCGGCGGCGGCGGCTACACCATCAACCACGTCGCCTCCACGTGGTGCTACGAGACGGCGGTCGCCGTCGGCAAGGAGGGGGAGCTCCCCGACGACATAGAGATACCCAGCCACGGCTACGAGCTCATGTACAAGAACCAGGGGAACAAGCTCCATTACCAGACGTCGACAGCGACGGCGGCGAGAAAGAGGTCGAGCAGCACGGAGGTCACCAAGGGGAAGGTGCTCGAGCACCTGTCGCAGGTCGAGCGCGCGCCGAGCGTGCAGTTCCAGGAGCGACGCGGCGGCGACAATGCCGCCGGAGTTGAGCTCTACTACGAGCGCCCTCCGAGCCTGGAAGACGACGAACCCGCGCAGAGGCTGCACCGCCTCTGCTTCCCCGCCGTGGCGAAGCGTATCAGGCTCAATGCCTGA
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
