WERAM Information

Tag Content
WERAM ID WERAM-Zem-0125
Ensembl Protein ID GRMZM2G367886_P01
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
GRMZM2G367886 GRMZM2G367886_T01 GRMZM2G367886_P01
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 8.50e-27 96.2 57 161
Organism Zea mays
Domain Profile
  HDAC Class-I
        class-1.txt   1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedc 92 
                        ++v+y+yd +vg+ +y++ hpmkp+r+++th L+  ygl  ++++++p+ a+ ++l++fh+++y++fl++v+pe++++ ++ lk+f+vgedc
  GRMZM2G367886_P01  57 RRVCYFYDVEVGNCYYEHCHPMKPHRIRMTHALLGRYGLLDQMQVFRPHPARDRDLCRFHADDYVSFLRSVTPETQQDQIRALKHFSVGEDC 148
                        589***************************************************************************************** PP
        class-1.txt  93 Pvfdglfeycqli 105
                        P +    ++   +
  GRMZM2G367886_P01 149 PRLRRSLQFLPNV 161
                        *988877776555 PP
Protein Sequence
(Fasta)		MAMMRGKKGY GDVGMEWKQR AVNGCKVGAR APTDTPSVVL CGGGNSLPTT GADGSKRRVC 60
YFYDVEVGNC YYEHCHPMKP HRIRMTHALL GRYGLLDQMQ VFRPHPARDR DLCRFHADDY 120
VSFLRSVTPE TQQDQIRALK HFSVGEDCPR LRRSLQFLPN VRGGFRWRLE VSEDRRGPWH 180
GGDDGRQGCD LAYDGIRAPK RDLRAWLAGR IRQARRVVWE REIGFWGLGM SAAAAAEGVE 240
GVDGGFDHGF RERSEGEDVG GQNVHPVDAY AAFLRDSKDF ANVWRSL 287
Nucleotide Sequence
(Fasta)		ATGGCGATGA TGCGAGGCAA AAAAGGCTAC GGTGATGTGG GGATGGAATG GAAGCAAAGA 60
GCAGTTAATG GATGCAAAGT TGGTGCTCGC GCCCCGACTG ACACACCCTC TGTCGTGCTG 120
TGCGGTGGCG GCAACTCCCT ACCGACCACT GGCGCGGACG GGTCGAAGCG CCGCGTCTGC 180
TACTTCTACG ACGTGGAGGT GGGCAACTGC TACTACGAGC ATTGCCACCC GATGAAGCCG 240
CACCGCATCC GCATGACCCA CGCGCTGCTC GGCCGCTACG GCCTCCTCGA CCAGATGCAA 300
GTGTTCCGCC CTCACCCTGC CCGCGACCGC GACCTCTGCC GCTTCCACGC CGACGATTAC 360
GTCTCCTTCC TCCGGTCCGT CACCCCCGAA ACGCAGCAGG ATCAGATCCG CGCGCTCAAG 420
CACTTCAGCG TCGGCGAGGA CTGCCCCCGT CTTCGACGGT CTCTACAGTT TCTGCCAAAC 480
GTACGCGGGG GGTTCCGTTG GCGGCTGGAA GTGAGCGAGG ATAGAAGGGG ACCATGGCAT 540
GGGGGCGACG ATGGAAGGCA GGGCTGTGAC CTTGCATACG ACGGAATCAG GGCGCCGAAG 600
CGAGATCTGC GGGCGTGGCT GGCGGGCAGA ATCAGACAGG CGCGGCGCGT GGTGTGGGAG 660
AGGGAAATAG GATTTTGGGG GCTGGGAATG TCGGCTGCCG CTGCCGCGGA GGGGGTGGAG 720
GGCGTTGATG GCGGCTTCGA TCACGGTTTC AGGGAGCGGA GCGAAGGGGA GGATGTCGGG 780
GGGCAGAACG TCCACCCTGT GGACGCCTAC GCTGCATTCT TAAGAGATAG TAAAGATTTT 840
GCAAATGTAT GGAGATCTTT ATAA 865
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sei-0026 Si006243m Setaria italica 70 6e-56 214
WERAM-Sob-0135 Sb10g022820.1 Sorghum bicolor 70 8e-56 214
WERAM-Orbr-0074 OB06G27130.1 Oryza brachyantha 68 2e-54 209
WERAM-Brd-0020 BRADI1G37290.1 Brachypodium distachyon 68 3e-54 209
WERAM-Tra-0318 Traes_7DL_578CF3F0D.2 Triticum aestivum 68 4e-54 208
WERAM-Orb-0066 OBART06G19560.1 Oryza barthii 67 1e-53 207
WERAM-Ors-0059 OS06T0583400-01 Oryza sativa 67 1e-53 206
WERAM-Orr-0068 ORUFI06G20660.1 Oryza rufipogon 67 2e-53 206
WERAM-Orgl-0064 OGLUM06G20570.1 Oryza glumaepatula 67 2e-53 206
WERAM-Orm-0063 OMERI06G19730.1 Oryza meridionalis 67 3e-53 206
WERAM-Ori-0130 BGIOSGA038718-PA Oryza indica 67 3e-53 206
WERAM-Orp-0064 OPUNC06G17670.1 Oryza punctata 66 2e-52 202
WERAM-Aet-0051 EMT16627 Aegilops tauschii 65 4e-51 198
WERAM-Orni-0065 ONIVA06G23170.1 Oryza nivara 83 1e-50 197
WERAM-Hov-0099 MLOC_71091.1 Hordeum vulgare 65 1e-50 197
WERAM-Pot-0112 POPTR_0009s17200.1 Populus trichocarpa 71 3e-47 186
WERAM-Thc-0026 EOX98961 Theobroma cacao 72 3e-46 182
WERAM-Bro-0021 Bo1g151980.1 Brassica oleracea 72 5e-46 181
WERAM-Brr-0202 Bra040131.1-P Brassica rapa 72 6e-46 181
WERAM-Art-0112 AT4G38130.1 Arabidopsis thaliana 72 7e-46 181
WERAM-Arl-0038 fgenesh1_pm.C_scaffold_7000002 Arabidopsis lyrata 72 8e-46 181
WERAM-Met-0084 KEH36404 Medicago truncatula 70 1e-45 180
WERAM-Viv-0012 VIT_03s0038g04240.t01 Vitis vinifera 71 5e-45 178
WERAM-Glm-0156 GLYMA13G06010.3 Glycine max 70 1e-44 177
WERAM-Prp-0056 EMJ02177 Prunus persica 70 2e-44 176
WERAM-Lep-0023 LPERR02G07360.1 Leersia perrieri 75 4e-44 175
WERAM-Sol-0120 Solyc09g091440.2.1 Solanum lycopersicum 68 5e-44 175
WERAM-Sot-0088 PGSC0003DMT400076252 Solanum tuberosum 68 6e-44 175
WERAM-Amt-0016 ERM94967 Amborella trichopoda 67 3e-43 172
WERAM-Org-0020 ORGLA02G0080500.1 Oryza glaberrima 72 1e-41 167
WERAM-Php-0088 PP1S351_29V6.1 Physcomitrella patens 65 2e-40 163
WERAM-Sem-0132 EFJ35052 Selaginella moellendorffii 60 8e-39 157
WERAM-Ten-0060 ENSTNIP00000007837.1 Tetraodon nigroviridis 46 7e-30 128
WERAM-Tar-0085 ENSTRUP00000016627.1 Takifugu rubripes 46 7e-30 128
WERAM-Ova-0221 ENSOARP00000022517.1 Ovis aries 48 9e-30 127
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 48 9e-30 127
WERAM-Orn-0136 ENSONIP00000014285.1 Oreochromis niloticus 47 1e-29 127
WERAM-Ran-0062 ENSRNOP00000012854.5 Rattus norvegicus 48 1e-29 127
WERAM-Mum-0093 ENSMUSP00000099657.4 Mus musculus 48 1e-29 127
WERAM-Ocp-0006 ENSOPRP00000000780.1 Ochotona princeps 48 1e-29 127
WERAM-Pof-0181 ENSPFOP00000015600.1 Poecilia formosa 47 1e-29 127
WERAM-Loa-0056 ENSLAFP00000004079.2 Loxodonta africana 48 1e-29 127
WERAM-Gaga-0034 ENSGALP00000005212.3 Gallus gallus 49 1e-29 127
WERAM-Tag-0022 ENSTGUP00000001473.1 Taeniopygia guttata 49 1e-29 127
WERAM-Asm-0120 ENSAMXP00000012237.1 Astyanax mexicanus 46 2e-29 127
WERAM-Leo-0014 ENSLOCP00000002993.1 Lepisosteus oculatus 48 2e-29 127
WERAM-Xet-0037 ENSXETP00000011480.3 Xenopus tropicalis 47 2e-29 127
WERAM-Dar-0035 ENSDARP00000051798.4 Danio rerio 46 2e-29 127
WERAM-Orla-0197 ENSORLP00000022529.1 Oryzias latipes 47 2e-29 126
WERAM-Xim-0061 ENSXMAP00000005239.1 Xiphophorus maculatus 46 2e-29 126
WERAM-Ict-0103 ENSSTOP00000010833.2 Ictidomys tridecemlineatus 48 2e-29 126
WERAM-Pem-0096 ENSPMAP00000010023.1 Petromyzon marinus 48 2e-29 126
WERAM-Cap-0092 ENSCPOP00000006985.2 Cavia porcellus 47 3e-29 126
WERAM-Ptv-0152 ENSPVAP00000012567.1 Pteropus vampyrus 48 3e-29 126
WERAM-Otg-0072 ENSOGAP00000005101.2 Otolemur garnettii 47 3e-29 126
WERAM-Orc-0030 ENSOCUP00000003186.2 Oryctolagus cuniculus 48 3e-29 126
WERAM-Myl-0152 ENSMLUP00000012593.2 Myotis lucifugus 47 3e-29 126
WERAM-Hos-0092 ENSP00000362649.3 Homo sapiens 47 3e-29 126
WERAM-Gog-0132 ENSGGOP00000011454.2 Gorilla gorilla 47 3e-29 126
WERAM-Tub-0143 ENSTBEP00000015305.1 Tupaia belangeri 47 3e-29 126
WERAM-Gam-0033 ENSGMOP00000003469.1 Gadus morhua 47 3e-29 126
WERAM-Caf-0116 ENSCAFP00000015619.3 Canis familiaris 47 3e-29 126
WERAM-Nol-0026 ENSNLEP00000003167.1 Nomascus leucogenys 47 3e-29 126
WERAM-Mup-0173 ENSMPUP00000015122.1 Mustela putorius furo 47 3e-29 126
WERAM-Aim-0087 ENSAMEP00000008076.1 Ailuropoda melanoleuca 48 3e-29 126
WERAM-Gaa-0093 ENSGACP00000012045.1 Gasterosteus aculeatus 47 4e-29 125
WERAM-Dan-0175 ENSDNOP00000033349.1 Dasypus novemcinctus 47 4e-29 125
WERAM-Osl-0002 ABO94711 Ostreococcus lucimarinus 51 4e-29 125
WERAM-Anc-0033 ENSACAP00000004062.3 Anolis carolinensis 47 5e-29 125
WERAM-Ora-0012 ENSOANP00000001904.1 Ornithorhynchus anatinus 47 6e-29 125
WERAM-Drm-0018 FBpp0073173 Drosophila melanogaster 49 6e-29 125
WERAM-Paa-0048 ENSPANP00000004176.1 Papio anubis 47 7e-29 124
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 46 1e-28 124
WERAM-Mod-0165 ENSMODP00000022264.3 Monodelphis domestica 46 1e-28 124
WERAM-Fia-0139 ENSFALP00000011453.1 Ficedula albicollis 46 1e-28 124
WERAM-Chs-0191 ENSCSAP00000011772.1 Chlorocebus sabaeus 46 1e-28 124
WERAM-Mam-0073 ENSMMUP00000011716.2 Macaca mulatta 46 2e-28 123
WERAM-Poa-0013 ENSPPYP00000001838.2 Pongo abelii 47 2e-28 123
WERAM-Sus-0028 ENSSSCP00000004781.2 Sus scrofa 46 2e-28 123
WERAM-Pat-0155 ENSPTRP00000049696.3 Pan troglodytes 46 2e-28 123
WERAM-Tut-0167 ENSTTRP00000014262.1 Tursiops truncatus 46 4e-28 122
WERAM-Cii-0014 ENSCINP00000005410.3 Ciona intestinalis 47 4e-28 122
WERAM-Prc-0089 ENSPCAP00000007999.1 Procavia capensis 46 5e-28 122
WERAM-Pug-0005 EFP76878 Puccinia graminis 44 6e-28 122
WERAM-Put-0006 PTTG_04745P0 Puccinia triticina 48 1e-27 120
WERAM-Pes-0020 ENSPSIP00000004435.1 Pelodiscus sinensis 47 6e-27 118
WERAM-Mel-0028 EGG09787 Melampsora laricipopulina 45 1e-26 117
WERAM-Tru-0093 TRIUR3_32991-P1 Triticum urartu 48 3e-26 116
WERAM-Yal-0022 CAG79885 Yarrowia lipolytica 45 7e-26 115
WERAM-Cae-0005 C53A5.3 Caenorhabditis elegans 47 1e-25 114
WERAM-Cag-0003 CAG57932 Candida glabrata 48 2e-25 113
WERAM-Sac-0039 YNL330C Saccharomyces cerevisiae 49 2e-25 113
WERAM-Kll-0018 CAG99124 Kluyveromyces lactis 48 3e-25 112
WERAM-Mua-0081 GSMUA_Achr5P06320_001 Musa acuminata 54 4e-25 112
WERAM-Lem-0026 CBX91288 Leptosphaeria maculans 38 6e-25 111
WERAM-Lac-0087 ENSLACP00000011092.1 Latimeria chalumnae 44 1e-24 110
WERAM-Cym-0014 CMJ129CT Cyanidioschyzon merolae 50 1e-24 110
WERAM-Dio-0123 ENSDORP00000011840.1 Dipodomys ordii 44 1e-24 110
WERAM-Pyt-0025 EFQ89270 Pyrenophora teres 41 2e-24 110
WERAM-Miv-0039 MVLG_05722T0 Microbotryum violaceum 38 2e-24 110
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 43 2e-24 110
WERAM-Meg-0022 ENSMGAP00000001598.1 Meleagris gallopavo 44 2e-24 110
WERAM-Kop-0004 CAY67954 Komagataella pastoris 43 2e-24 110
WERAM-Asg-0034 AAS54885 Ashbya gossypii 48 2e-24 110
WERAM-Sah-0124 ENSSHAP00000012846.1 Sarcophilus harrisii 44 2e-24 110
Created Date 25-Jun-2016