WERAM Information

Tag Content
WERAM ID WERAM-Org-0020
Ensembl Protein ID ORGLA02G0080500.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ORGLA02G0080500 ORGLA02G0080500.1 ORGLA02G0080500.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 2.00e-27 97.3 24 120
Organism Oryza glaberrima
Domain Profile
  HDAC Class-I
        class-1.txt   1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnygls..kkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvge 90 
                        ++v+y+yd++vg+y+ygq+hpmkp+r+++th L+ +ygl    k+++++p  a+ ++l++fhs++y+ fl+ v+pe++ + +++l++fnvge
  ORGLA02G0080500.1  24 RRVCYFYDPEVGNYYYGQGHPMKPHRVRMTHALLAHYGLLapAKMQVLRPLPARDRDLCRFHSDDYVAFLRAVTPETQFDQIRSLRRFNVGE 115
                        589***********************************963369************************************************ PP
        class-1.txt  91 dcPvf 95 
                        dcPv 
  ORGLA02G0080500.1 116 DCPVX 120
                        ***97 PP
Protein Sequence
(Fasta)		MDPSSAGAGG NSLASASCGD AQKRRVCYFY DPEVGNYYYG QGHPMKPHRV RMTHALLAHY 60
GLLAPAKMQV LRPLPARDRD LCRFHSDDYV AFLRAVTPET QFDQIRSLRR FNVGEDCPVX 120
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 180
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 240
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXTGVAL GEELQEKLPY NEYYEYFGPE 300
YSLYVAASNM ENRNTNKQLE EIKCNILDNL SKLQHAPSVQ FQERIPETKL PEPDEDQEDP 360
DERHDPDSDM VLDDHKPTGH SARSLIHNIG VKREITETET KDQHGKRLTT EHKGPEPMAE 420
DLGSSKQAPT ADANAVAVNA PGNARNEPGS SPK 453
Nucleotide Sequence
(Fasta)		ATGGACCCCT CGTCGGCGGG CGCCGGCGGC AACTCGCTGG CGTCGGCGTC GTGCGGCGAC 60
GCGCAGAAGC GGCGGGTGTG CTACTTCTAC GATCCGGAGG TGGGCAACTA CTACTACGGG 120
CAGGGCCACC CGATGAAGCC CCACCGCGTG AGGATGACCC ACGCGCTGCT CGCCCACTAC 180
GGCCTCCTCG CCCCGGCCAA GATGCAGGTG CTCCGCCCGC TCCCCGCCCG CGACCGCGAC 240
CTCTGCCGCT TCCACTCCGA CGACTACGTC GCCTTCCTCC GCGCCGTCAC CCCGGAGACC 300
CAGTTCGACC AGATCCGCTC CCTCCGCCGC TTCAACGTCG GCGAGGACTG CCCCGTGNNN 360
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 420
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 480
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 540
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 600
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 660
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 720
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 780
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNACAGG AGTTGCACTT 840
GGTGAAGAGC TACAGGAGAA GTTACCTTAC AATGAGTATT ATGAATATTT TGGTCCAGAA 900
TACAGTCTTT ACGTTGCAGC AAGTAACATG GAGAACAGAA ATACAAACAA GCAACTGGAG 960
GAAATAAAAT GCAATATTCT GGACAATCTT TCGAAACTTC AACATGCACC TAGCGTCCAA 1020
TTTCAAGAGC GAATTCCTGA AACAAAGCTA CCTGAGCCAG ATGAAGATCA AGAGGATCCA 1080
GATGAAAGGC ACGACCCTGA CTCTGATATG GTGTTGGATG ATCACAAACC TACGGGACAC 1140
TCAGCAAGAA GCCTTATTCA CAACATCGGA GTAAAGAGAG AAATTACTGA AACAGAGACC 1200
AAAGATCAGC ATGGTAAGAG ATTAACAACC GAACATAAAG GACCAGAACC GATGGCAGAG 1260
GATCTTGGTT CCTCCAAGCA AGCTCCTACT GCGGATGCAA ATGCGGTGGC CGTCAACGCG 1320
CCAGGCAACG CCAGGAATGA ACCGGGAAGC TCACCCAAAT GA 1363
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Ors-0018 OS02T0214900-01 Oryza sativa 100 1e-73 274
WERAM-Orgl-0022 OGLUM02G08770.1 Oryza glumaepatula 96 4e-71 266
WERAM-Orm-0022 OMERI02G09820.1 Oryza meridionalis 97 4e-71 266
WERAM-Orni-0019 ONIVA02G09870.1 Oryza nivara 98 4e-71 266
WERAM-Ori-0019 BGIOSGA006874-PA Oryza indica 98 4e-70 263
WERAM-Orr-0020 ORUFI02G08620.1 Oryza rufipogon 93 6e-70 262
WERAM-Orl-0097 KN540811.1_FGP001 Oryza longistaminata 96 1e-69 261
WERAM-Orp-0021 OPUNC02G07700.1 Oryza punctata 93 3e-69 259
WERAM-Orb-0021 OBART02G08720.1 Oryza barthii 99 7e-58 222
WERAM-Lep-0023 LPERR02G07360.1 Leersia perrieri 89 2e-50 197
WERAM-Orbr-0024 OB02G17760.1 Oryza brachyantha 75 3e-50 196
WERAM-Brd-0068 BRADI3G08060.1 Brachypodium distachyon 84 2e-47 187
WERAM-Bro-0021 Bo1g151980.1 Brassica oleracea 83 2e-47 187
WERAM-Brr-0202 Bra040131.1-P Brassica rapa 83 2e-47 187
WERAM-Art-0112 AT4G38130.1 Arabidopsis thaliana 83 3e-47 187
WERAM-Hov-0099 MLOC_71091.1 Hordeum vulgare 84 3e-47 186
WERAM-Arl-0038 fgenesh1_pm.C_scaffold_7000002 Arabidopsis lyrata 83 3e-47 186
WERAM-Pot-0051 POPTR_0004s21950.1 Populus trichocarpa 82 4e-47 186
WERAM-Aet-0051 EMT16627 Aegilops tauschii 84 7e-47 185
WERAM-Tra-0318 Traes_7DL_578CF3F0D.2 Triticum aestivum 84 7e-47 185
WERAM-Sei-0026 Si006243m Setaria italica 84 1e-46 184
WERAM-Sob-0135 Sb10g022820.1 Sorghum bicolor 84 1e-46 184
WERAM-Glm-0001 GLYMA0006S50.1 Glycine max 81 7e-46 182
WERAM-Zem-0099 GRMZM2G172883_P01 Zea mays 82 9e-46 181
WERAM-Thc-0026 EOX98961 Theobroma cacao 81 1e-45 181
WERAM-Viv-0012 VIT_03s0038g04240.t01 Vitis vinifera 81 3e-45 180
WERAM-Met-0084 KEH36404 Medicago truncatula 80 4e-45 179
WERAM-Prp-0056 EMJ02177 Prunus persica 81 4e-45 179
WERAM-Sol-0120 Solyc09g091440.2.1 Solanum lycopersicum 80 5e-45 179
WERAM-Sot-0088 PGSC0003DMT400076252 Solanum tuberosum 80 8e-45 178
WERAM-Amt-0016 ERM94967 Amborella trichopoda 78 2e-44 177
WERAM-Php-0050 PP1S223_52V6.1 Physcomitrella patens 75 9e-43 172
WERAM-Sem-0132 EFJ35052 Selaginella moellendorffii 73 2e-42 170
WERAM-Tru-0047 TRIUR3_21298-P1 Triticum urartu 64 8e-40 162
WERAM-Osl-0002 ABO94711 Ostreococcus lucimarinus 61 5e-32 136
WERAM-Mua-0081 GSMUA_Achr5P06320_001 Musa acuminata 57 6e-32 135
WERAM-Anc-0033 ENSACAP00000004062.3 Anolis carolinensis 56 6e-31 132
WERAM-Ora-0012 ENSOANP00000001904.1 Ornithorhynchus anatinus 58 7e-31 132
WERAM-Pem-0096 ENSPMAP00000010023.1 Petromyzon marinus 57 9e-31 132
WERAM-Gaga-0034 ENSGALP00000005212.3 Gallus gallus 57 9e-31 132
WERAM-Ran-0062 ENSRNOP00000012854.5 Rattus norvegicus 57 1e-30 132
WERAM-Tag-0022 ENSTGUP00000001473.1 Taeniopygia guttata 57 1e-30 132
WERAM-Mum-0093 ENSMUSP00000099657.4 Mus musculus 57 1e-30 132
WERAM-Ocp-0006 ENSOPRP00000000780.1 Ochotona princeps 57 1e-30 131
WERAM-Loa-0056 ENSLAFP00000004079.2 Loxodonta africana 57 1e-30 131
WERAM-Ova-0221 ENSOARP00000022517.1 Ovis aries 57 1e-30 131
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 57 1e-30 131
WERAM-Drm-0018 FBpp0073173 Drosophila melanogaster 58 2e-30 131
WERAM-Asm-0120 ENSAMXP00000012237.1 Astyanax mexicanus 56 2e-30 131
WERAM-Gam-0211 ENSGMOP00000020496.1 Gadus morhua 56 2e-30 131
WERAM-Tar-0062 ENSTRUP00000012875.1 Takifugu rubripes 56 2e-30 131
WERAM-Xet-0037 ENSXETP00000011480.3 Xenopus tropicalis 56 2e-30 130
WERAM-Tub-0143 ENSTBEP00000015305.1 Tupaia belangeri 56 2e-30 130
WERAM-Orc-0030 ENSOCUP00000003186.2 Oryctolagus cuniculus 56 2e-30 130
WERAM-Leo-0014 ENSLOCP00000002993.1 Lepisosteus oculatus 57 2e-30 130
WERAM-Dar-0035 ENSDARP00000051798.4 Danio rerio 56 2e-30 130
WERAM-Cap-0092 ENSCPOP00000006985.2 Cavia porcellus 56 2e-30 130
WERAM-Otg-0072 ENSOGAP00000005101.2 Otolemur garnettii 56 2e-30 130
WERAM-Ptv-0152 ENSPVAP00000012567.1 Pteropus vampyrus 56 2e-30 130
WERAM-Ict-0103 ENSSTOP00000010833.2 Ictidomys tridecemlineatus 56 2e-30 130
WERAM-Hos-0092 ENSP00000362649.3 Homo sapiens 56 2e-30 130
WERAM-Gog-0132 ENSGGOP00000011454.2 Gorilla gorilla 56 2e-30 130
WERAM-Myl-0152 ENSMLUP00000012593.2 Myotis lucifugus 56 2e-30 130
WERAM-Nol-0026 ENSNLEP00000003167.1 Nomascus leucogenys 56 2e-30 130
WERAM-Caf-0116 ENSCAFP00000015619.3 Canis familiaris 56 2e-30 130
WERAM-Mup-0173 ENSMPUP00000015122.1 Mustela putorius furo 56 3e-30 130
WERAM-Ten-0200 ENSTNIP00000020022.1 Tetraodon nigroviridis 56 3e-30 130
WERAM-Orn-0090 ENSONIP00000010308.1 Oreochromis niloticus 56 3e-30 130
WERAM-Aim-0087 ENSAMEP00000008076.1 Ailuropoda melanoleuca 56 3e-30 130
WERAM-Gaa-0093 ENSGACP00000012045.1 Gasterosteus aculeatus 56 3e-30 130
WERAM-Orla-0192 ENSORLP00000021872.1 Oryzias latipes 56 3e-30 130
WERAM-Xim-0002 ENSXMAP00000000390.1 Xiphophorus maculatus 56 3e-30 130
WERAM-Pof-0067 ENSPFOP00000005770.2 Poecilia formosa 56 3e-30 130
WERAM-Dan-0175 ENSDNOP00000033349.1 Dasypus novemcinctus 56 3e-30 130
WERAM-Paa-0048 ENSPANP00000004176.1 Papio anubis 56 6e-30 129
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 55 7e-30 129
WERAM-Mod-0165 ENSMODP00000022264.3 Monodelphis domestica 55 7e-30 129
WERAM-Chs-0191 ENSCSAP00000011772.1 Chlorocebus sabaeus 55 7e-30 129
WERAM-Fia-0139 ENSFALP00000011453.1 Ficedula albicollis 55 8e-30 129
WERAM-Sus-0028 ENSSSCP00000004781.2 Sus scrofa 55 1e-29 128
WERAM-Mam-0073 ENSMMUP00000011716.2 Macaca mulatta 55 1e-29 128
WERAM-Poa-0153 ENSPPYP00000018964.2 Pongo abelii 55 2e-29 127
WERAM-Pat-0155 ENSPTRP00000049696.3 Pan troglodytes 55 2e-29 127
WERAM-Prc-0089 ENSPCAP00000007999.1 Procavia capensis 55 2e-29 127
WERAM-Tut-0167 ENSTTRP00000014262.1 Tursiops truncatus 55 3e-29 127
WERAM-Cii-0014 ENSCINP00000005410.3 Ciona intestinalis 55 1e-28 125
WERAM-Mel-0028 EGG09787 Melampsora laricipopulina 53 4e-28 123
WERAM-Put-0006 PTTG_04745P0 Puccinia triticina 53 4e-28 123
WERAM-Pes-0020 ENSPSIP00000004435.1 Pelodiscus sinensis 53 5e-28 122
WERAM-Pug-0005 EFP76878 Puccinia graminis 53 1e-27 122
WERAM-Lac-0087 ENSLACP00000011092.1 Latimeria chalumnae 55 2e-27 121
WERAM-Meg-0022 ENSMGAP00000001598.1 Meleagris gallopavo 55 3e-27 120
WERAM-Sah-0124 ENSSHAP00000012846.1 Sarcophilus harrisii 55 3e-27 120
WERAM-Dio-0123 ENSDORP00000011840.1 Dipodomys ordii 54 3e-27 120
WERAM-Eqc-0167 ENSECAP00000018023.1 Equus caballus 55 3e-27 120
WERAM-Mae-0008 ENSMEUP00000000621.1 Macropus eugenii 55 4e-27 120
Created Date 25-Jun-2016