| Tag |
Content |
| WERAM ID |
WERAM-Sei-0069 |
| Ensembl Protein ID |
Si016908m |
| Gene Name |
SETIT_016908mg |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
1.20e-164 |
548.3 |
23 |
333 |
|
| Organism |
Setaria italica |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdgl 98
++v+y+yd++vg+y+ygq+hpmkp+r+++th+L+ ygl +++++++p+ a+ ++l++fh+++yi+fl++v+pe++++ ++ lk+fnvgedcPvfdgl
Si016908m 23 RRVCYFYDPEVGNYYYGQGHPMKPHRIRMTHSLLARYGLLNQMQVYRPNPARDRDLCRFHADDYINFLRSVTPETQQDQIRLLKRFNVGEDCPVFDGL 120
589*********************************************************************************************** PP
class-1.txt 99 feycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvmtvsfhkygee 196
+++cq+++Gas+ +a kLn++ diainw+GGlhhakk+easGfcyvnDivlailellk+h+rvly+did+hhGDgveeafyttdrvmtvsfhk+g+
Si016908m 121 YSFCQTYAGASVGGAVKLNHG-HDIAINWSGGLHHAKKCEASGFCYVNDIVLAILELLKHHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGD- 216
******************997.59*************************************************************************. PP
class-1.txt 197 ffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksfnlpllvlGGG 294
+fPgtGd++d+g+ kgkyy++nvPl+dgidDesy+++fk+++ kv+e+f+P avvlqcGaDsl+gDrlg+fnlsikghaecvk+++sfn+pll+lGGG
Si016908m 217 YFPGTGDIRDIGHSKGKYYSLNVPLDDGIDDESYQSLFKPIMGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKYMRSFNVPLLLLGGG 314
************************************************************************************************** PP
class-1.txt 295 GYtlrnvaRcwtyetavvl 313
GYt+rnvaRcw+yet+v+l
Si016908m 315 GYTIRNVARCWCYETGVAL 333
****************986 PP
|
Protein Sequence
(Fasta) | MDLSSAGSGG NSLPSVGPDG QKRRVCYFYD PEVGNYYYGQ GHPMKPHRIR MTHSLLARYG 60
LLNQMQVYRP NPARDRDLCR FHADDYINFL RSVTPETQQD QIRLLKRFNV GEDCPVFDGL 120
YSFCQTYAGA SVGGAVKLNH GHDIAINWSG GLHHAKKCEA SGFCYVNDIV LAILELLKHH 180
ERVLYVDIDI HHGDGVEEAF YTTDRVMTVS FHKFGDYFPG TGDIRDIGHS KGKYYSLNVP 240
LDDGIDDESY QSLFKPIMGK VMEVFRPGAV VLQCGADSLS GDRLGCFNLS IKGHAECVKY 300
MRSFNVPLLL LGGGGYTIRN VARCWCYETG VALGQELEDK MPVNEYYEYF GPDYTLHVAP 360
SNMENKNTRH QLDDIRSKLL DNLSKLRHAP SVQFQERPPD TELPEPDEDQ VDPDERHDPD 420
SDMEVDDHKA VEESTRRSNI LGIRVKREFG ESDTKVQDGG RVTSEHRGLE PMAEDIGSSK 480
QAPQADANAM AIDEPGNVKN EPETQLSYQT NQPCTISHDC DI 522Protein Fasta Sequence
>Si016908m|Class-I|Setaria italica
MDLSSAGSGGNSLPSVGPDGQKRRVCYFYDPEVGNYYYGQGHPMKPHRIRMTHSLLARYGLLNQMQVYRPNPARDRDLCRFHADDYINFLRSVTPETQQDQIRLLKRFNVGEDCPVFDGLYSFCQTYAGASVGGAVKLNHGHDIAINWSGGLHHAKKCEASGFCYVNDIVLAILELLKHHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGHSKGKYYSLNVPLDDGIDDESYQSLFKPIMGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKYMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGQELEDKMPVNEYYEYFGPDYTLHVAPSNMENKNTRHQLDDIRSKLLDNLSKLRHAPSVQFQERPPDTELPEPDEDQVDPDERHDPDSDMEVDDHKAVEESTRRSNILGIRVKREFGESDTKVQDGGRVTSEHRGLEPMAEDIGSSKQAPQADANAMAIDEPGNVKNEPETQLSYQTNQPCTISHDCDI |
Nucleotide Sequence
(Fasta) | AAAGGCTCCC CTCCCGGCTC CCGCATCCAC AAAGAGAGAG AGAGAGAGAG AGAACATCCC 60
GCTCCTACAA ACCCCAAATC CCCAGCGGCG GCGGCGATGG ACCTCTCGTC GGCGGGCTCC 120
GGCGGCAACT CGCTGCCGTC GGTCGGCCCC GACGGGCAGA AGCGGCGCGT GTGCTACTTC 180
TACGACCCGG AGGTTGGCAA CTACTACTAC GGGCAGGGGC ACCCGATGAA GCCGCACCGC 240
ATCCGGATGA CGCACTCGCT GCTCGCCCGC TACGGCCTCC TCAACCAGAT GCAGGTCTAC 300
CGCCCCAACC CCGCCCGCGA CCGCGACCTC TGCCGCTTCC ACGCCGACGA CTACATCAAC 360
TTCCTCCGCT CCGTCACGCC CGAGACGCAG CAGGACCAGA TCCGCCTCCT CAAGCGCTTC 420
AACGTCGGCG AGGACTGCCC CGTCTTCGAC GGCCTCTACA GCTTCTGCCA GACCTACGCC 480
GGCGCCTCCG TCGGAGGGGC AGTCAAGCTC AACCACGGCC ACGACATCGC AATCAACTGG 540
TCGGGGGGCC TGCACCACGC GAAGAAGTGC GAGGCGTCGG GCTTCTGCTA CGTCAACGAC 600
ATCGTGCTCG CCATACTCGA GCTCCTCAAG CACCACGAGA GAGTTCTGTA TGTCGATATC 660
GATATCCACC ATGGAGACGG AGTCGAGGAG GCTTTCTACA CAACAGACAG GGTCATGACC 720
GTCTCGTTCC ACAAGTTTGG GGATTATTTT CCTGGAACAG GGGATATCCG TGACATTGGC 780
CACTCAAAGG GGAAGTACTA CTCTCTGAAT GTCCCTCTGG ATGATGGGAT TGATGATGAA 840
AGCTATCAGT CCCTGTTCAA GCCGATCATG GGCAAGGTTA TGGAGGTTTT CCGCCCTGGT 900
GCAGTTGTGC TTCAGTGTGG TGCTGATTCC TTGTCTGGAG ATAGGCTAGG CTGCTTCAAT 960
CTCTCTATCA AAGGTCATGC AGAATGTGTC AAATACATGA GGTCTTTCAA CGTTCCATTG 1020
CTGCTTCTCG GTGGTGGTGG ATATACCATC AGAAATGTTG CACGGTGCTG GTGTTACGAG 1080
ACGGGAGTTG CTCTTGGTCA GGAGCTTGAA GACAAGATGC CTGTCAACGA GTACTATGAA 1140
TACTTCGGTC CAGATTACAC TCTTCATGTT GCACCAAGTA ACATGGAGAA CAAAAATACA 1200
CGACACCAAC TGGATGATAT TAGAAGCAAA CTTCTGGATA ATCTTTCAAA ACTTCGGCAT 1260
GCTCCTAGTG TCCAGTTTCA AGAGCGGCCT CCTGACACAG AGTTGCCTGA GCCAGATGAA 1320
GATCAAGTGG ATCCAGATGA AAGGCACGAT CCTGATTCTG ATATGGAAGT GGATGACCAC 1380
AAGGCTGTGG AAGAGTCAAC AAGGAGGAGC AACATTCTAG GGATAAGAGT TAAGAGAGAA 1440
TTTGGTGAAA GTGACACCAA AGTTCAGGAT GGTGGCAGAG TTACATCTGA ACATAGAGGA 1500
CTGGAACCCA TGGCAGAAGA CATTGGTTCC TCCAAGCAAG CTCCTCAGGC AGATGCCAAT 1560
GCGATGGCCA TCGATGAGCC AGGCAACGTC AAGAATGAAC CAGAGACTCA ACTAAGTTAC 1620
CAGACCAACC AGCCATGTAC CATAAGCCAT GACTGCGACA TCTGAACTTG CCAGCTGTCT 1680
GGTGTCCAAA TTCCTGGACG CTTTCGACGG TCCAAAAACT AAAAGTGAAT CCATGATACA 1740
GCGTGCGATT TTAAATTCGA TTTGAGTTCT ACCCATCTGT AATCTGTTAA TCCCATGGGA 1800
GTATTCCATG GCGGTAGTGA AGTTCCATGA GTCCACCGGG CAATGCTTGA GGTTGAGATA 1860
GACGATAGTC TGACCCATGT ATACATGATA TGCCAGTTAA GTTGTACAGG CATTAGTTAA 1920
TGCAAATATG CAATGAACTT GAGGTTAAAT TTC
1954Nucleotide Fasta Sequence
>Si016908m|Class-I|Setaria italica
AAAGGCTCCCCTCCCGGCTCCCGCATCCACAAAGAGAGAGAGAGAGAGAGAGAACATCCCGCTCCTACAAACCCCAAATCCCCAGCGGCGGCGGCGATGGACCTCTCGTCGGCGGGCTCCGGCGGCAACTCGCTGCCGTCGGTCGGCCCCGACGGGCAGAAGCGGCGCGTGTGCTACTTCTACGACCCGGAGGTTGGCAACTACTACTACGGGCAGGGGCACCCGATGAAGCCGCACCGCATCCGGATGACGCACTCGCTGCTCGCCCGCTACGGCCTCCTCAACCAGATGCAGGTCTACCGCCCCAACCCCGCCCGCGACCGCGACCTCTGCCGCTTCCACGCCGACGACTACATCAACTTCCTCCGCTCCGTCACGCCCGAGACGCAGCAGGACCAGATCCGCCTCCTCAAGCGCTTCAACGTCGGCGAGGACTGCCCCGTCTTCGACGGCCTCTACAGCTTCTGCCAGACCTACGCCGGCGCCTCCGTCGGAGGGGCAGTCAAGCTCAACCACGGCCACGACATCGCAATCAACTGGTCGGGGGGCCTGCACCACGCGAAGAAGTGCGAGGCGTCGGGCTTCTGCTACGTCAACGACATCGTGCTCGCCATACTCGAGCTCCTCAAGCACCACGAGAGAGTTCTGTATGTCGATATCGATATCCACCATGGAGACGGAGTCGAGGAGGCTTTCTACACAACAGACAGGGTCATGACCGTCTCGTTCCACAAGTTTGGGGATTATTTTCCTGGAACAGGGGATATCCGTGACATTGGCCACTCAAAGGGGAAGTACTACTCTCTGAATGTCCCTCTGGATGATGGGATTGATGATGAAAGCTATCAGTCCCTGTTCAAGCCGATCATGGGCAAGGTTATGGAGGTTTTCCGCCCTGGTGCAGTTGTGCTTCAGTGTGGTGCTGATTCCTTGTCTGGAGATAGGCTAGGCTGCTTCAATCTCTCTATCAAAGGTCATGCAGAATGTGTCAAATACATGAGGTCTTTCAACGTTCCATTGCTGCTTCTCGGTGGTGGTGGATATACCATCAGAAATGTTGCACGGTGCTGGTGTTACGAGACGGGAGTTGCTCTTGGTCAGGAGCTTGAAGACAAGATGCCTGTCAACGAGTACTATGAATACTTCGGTCCAGATTACACTCTTCATGTTGCACCAAGTAACATGGAGAACAAAAATACACGACACCAACTGGATGATATTAGAAGCAAACTTCTGGATAATCTTTCAAAACTTCGGCATGCTCCTAGTGTCCAGTTTCAAGAGCGGCCTCCTGACACAGAGTTGCCTGAGCCAGATGAAGATCAAGTGGATCCAGATGAAAGGCACGATCCTGATTCTGATATGGAAGTGGATGACCACAAGGCTGTGGAAGAGTCAACAAGGAGGAGCAACATTCTAGGGATAAGAGTTAAGAGAGAATTTGGTGAAAGTGACACCAAAGTTCAGGATGGTGGCAGAGTTACATCTGAACATAGAGGACTGGAACCCATGGCAGAAGACATTGGTTCCTCCAAGCAAGCTCCTCAGGCAGATGCCAATGCGATGGCCATCGATGAGCCAGGCAACGTCAAGAATGAACCAGAGACTCAACTAAGTTACCAGACCAACCAGCCATGTACCATAAGCCATGACTGCGACATCTGAACTTGCCAGCTGTCTGGTGTCCAAATTCCTGGACGCTTTCGACGGTCCAAAAACTAAAAGTGAATCCATGATACAGCGTGCGATTTTAAATTCGATTTGAGTTCTACCCATCTGTAATCTGTTAATCCCATGGGAGTATTCCATGGCGGTAGTGAAGTTCCATGAGTCCACCGGGCAATGCTTGAGGTTGAGATAGACGATAGTCTGACCCATGTATACATGATATGCCAGTTAAGTTGTACAGGCATTAGTTAATGCAAATATGCAATGAACTTGAGGTTAAATTTC
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
