| Tag |
Content |
| WERAM ID |
WERAM-Sei-0026 |
| Ensembl Protein ID |
Si006243m |
| Gene Name |
SETIT_006243mg |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
1.30e-163 |
544.9 |
22 |
332 |
|
| Organism |
Setaria italica |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdgl 98
++v+y+yd +vg+y+ygq+hpmkp+r+++th L+ ygl ++++++p+ a+ ++l++fh+++y+ fl++v+pe++++ ++ lk+fnvgedcPvfdgl
Si006243m 22 RRVCYFYDAEVGNYYYGQGHPMKPHRIRMTHALLGRYGLLDQMQVLRPHPARDRDLCRFHADDYVAFLRSVTPETQQDQIRALKRFNVGEDCPVFDGL 119
589*********************************************************************************************** PP
class-1.txt 99 feycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvmtvsfhkygee 196
+++cq+++G+s+ +a kLn++ diainwaGGlhhakk+easGfcyvnDivlailellk+h+rvly+did+hhGDgveeafyttdrvmtvsfhk+g+
Si006243m 120 YSFCQTYAGGSVGGAVKLNHG-HDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKYHQRVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGD- 215
******************997.59*************************************************************************. PP
class-1.txt 197 ffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksfnlpllvlGGG 294
+fPgtGd++dvg+ kgkyy++nvPl+dgidDesy+++fk+++ kv+e+f+P avvlqcGaDsl+gDrlg+fnlsikghaecv+f++sfn+pll+lGGG
Si006243m 216 YFPGTGDIRDVGHSKGKYYSLNVPLDDGIDDESYQSLFKPIMGKVMEVFNPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRFMRSFNVPLLLLGGG 313
************************************************************************************************** PP
class-1.txt 295 GYtlrnvaRcwtyetavvl 313
GYt+rnvaRcw+yet+v+l
Si006243m 314 GYTIRNVARCWCYETGVAL 332
****************986 PP
|
Protein Sequence
(Fasta) | MDASAGGGGN SLPTTGADGS KRRVCYFYDA EVGNYYYGQG HPMKPHRIRM THALLGRYGL 60
LDQMQVLRPH PARDRDLCRF HADDYVAFLR SVTPETQQDQ IRALKRFNVG EDCPVFDGLY 120
SFCQTYAGGS VGGAVKLNHG HDIAINWAGG LHHAKKCEAS GFCYVNDIVL AILELLKYHQ 180
RVLYVDIDIH HGDGVEEAFY TTDRVMTVSF HKFGDYFPGT GDIRDVGHSK GKYYSLNVPL 240
DDGIDDESYQ SLFKPIMGKV MEVFNPGAVV LQCGADSLSG DRLGCFNLSI KGHAECVRFM 300
RSFNVPLLLL GGGGYTIRNV ARCWCYETGV ALGHELTDKM PPNEYYEYFG PDYTLHVAPS 360
NMENKNTRHQ LDDIRSKLLD NLSKLRHAPS VQFQERPPEA ELPEQDEDKE NPDERRDADS 420
DVEMNDAKPL EDSGRRSNIQ GVRMKKEPAE TEATDLDVNS VAAEHSRGNG PVADGVGSSK 480
QTLPNDASPM AVDEPGAQKV ETESSNKLQD QPTMQQKP 518Protein Fasta Sequence
>Si006243m|Class-I|Setaria italica
MDASAGGGGNSLPTTGADGSKRRVCYFYDAEVGNYYYGQGHPMKPHRIRMTHALLGRYGLLDQMQVLRPHPARDRDLCRFHADDYVAFLRSVTPETQQDQIRALKRFNVGEDCPVFDGLYSFCQTYAGGSVGGAVKLNHGHDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKYHQRVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDVGHSKGKYYSLNVPLDDGIDDESYQSLFKPIMGKVMEVFNPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGHELTDKMPPNEYYEYFGPDYTLHVAPSNMENKNTRHQLDDIRSKLLDNLSKLRHAPSVQFQERPPEAELPEQDEDKENPDERRDADSDVEMNDAKPLEDSGRRSNIQGVRMKKEPAETEATDLDVNSVAAEHSRGNGPVADGVGSSKQTLPNDASPMAVDEPGAQKVETESSNKLQDQPTMQQKP |
Nucleotide Sequence
(Fasta) | GAGACCCAAC CCAAAAGCTC CGTCAGGAAA GGGAAGCGAG AGCACCGCCC GCGAATCCGG 60
CGATGGACGC GTCGGCCGGC GGCGGCGGGA ACTCCCTGCC GACCACCGGC GCGGACGGCT 120
CGAAGCGCCG CGTCTGCTAC TTCTACGACG CGGAGGTGGG CAACTACTAC TACGGGCAGG 180
GGCACCCGAT GAAGCCGCAC CGCATCCGCA TGACCCACGC GCTGCTCGGC CGCTACGGCC 240
TCCTCGACCA GATGCAGGTG CTCCGCCCCC ACCCCGCCCG CGACCGCGAC CTCTGCCGCT 300
TCCACGCCGA CGACTACGTC GCCTTCCTCC GCTCCGTCAC CCCCGAGACG CAGCAGGACC 360
AGATCCGCGC GCTCAAGCGC TTCAACGTCG GCGAGGACTG CCCCGTCTTC GACGGGCTCT 420
ACAGCTTCTG CCAGACCTAC GCGGGGGGAT CCGTCGGCGG CGCCGTCAAG CTCAACCACG 480
GCCACGACAT CGCCATCAAC TGGGCCGGCG GCCTCCACCA CGCCAAGAAG TGCGAGGCCT 540
CCGGGTTCTG CTATGTCAAT GACATCGTCC TCGCCATCCT CGAGCTCCTC AAGTATCATC 600
AGCGCGTTCT GTACGTCGAT ATTGATATCC ACCACGGGGA TGGCGTGGAG GAGGCATTTT 660
ACACCACGGA CCGGGTGATG ACAGTATCGT TCCACAAATT TGGGGATTAT TTCCCTGGGA 720
CGGGGGACAT TCGTGATGTT GGGCACTCGA AGGGGAAGTA TTACTCCCTC AATGTCCCAT 780
TGGATGATGG TATTGATGAC GAGAGCTACC AGTCATTATT CAAGCCGATT ATGGGCAAGG 840
TGATGGAGGT TTTCAACCCT GGTGCGGTTG TGCTTCAGTG TGGTGCGGAT TCCTTGTCGG 900
GAGACAGGTT GGGCTGTTTC AACCTATCTA TTAAGGGGCA CGCGGAGTGC GTGAGATTCA 960
TGAGGTCCTT CAATGTCCCA CTGTTGTTGC TTGGTGGTGG TGGGTACACC ATAAGAAATG 1020
TTGCACGCTG TTGGTGCTAC GAGACAGGAG TTGCGCTTGG TCATGAGCTC ACTGACAAGA 1080
TGCCCCCTAA TGAGTATTAT GAGTATTTTG GTCCAGATTA CACTCTACAT GTTGCTCCAA 1140
GTAATATGGA GAACAAAAAC ACACGGCATC AATTGGATGA TATAAGATCA AAACTTCTTG 1200
ATAATCTATC AAAACTCCGA CATGCTCCTA GTGTCCAATT TCAAGAACGA CCTCCAGAGG 1260
CCGAGTTACC AGAGCAAGAT GAAGATAAAG AGAACCCTGA TGAAAGACGT GATGCTGATT 1320
CTGATGTGGA AATGAATGAT GCCAAGCCTT TGGAGGACTC TGGAAGGAGG AGCAACATAC 1380
AAGGTGTAAG AATGAAGAAA GAACCTGCTG AGACAGAGGC AACTGACCTG GATGTTAATA 1440
GTGTAGCTGC AGAACATTCA AGAGGCAATG GACCTGTTGC TGATGGAGTT GGTTCCTCAA 1500
AACAAACCCT GCCTAATGAT GCAAGTCCAA TGGCCGTAGA CGAACCAGGT GCTCAGAAAG 1560
TTGAAACAGA GAGCTCAAAC AAATTGCAGG ACCAACCAAC GATGCAACAG AAGCCATAAT 1620
CGGGCACCTT AACTTAGTAC CTGATGCAAT TGCATCTGTA GCCTGTAGAT TCTTTTTTTC 1680
ATGTTCGTTG ACCGTAGACA AGCCGTGACA GTTGAAAAGC TTTAGCAGGG AGCTGAAACA 1740
AATGCAATTG GAACAGATTA TGCATCTGAA CCCATGATAT TTTGATCATT ACATTTGAGT 1800
TTCTAACATC TGCAAATGAT AGTTTTGTTT CGTCATGGAA ACCTTATCCT TAACCCCAAG 1860
CTGCTGCAAA GGAATTGATG TCGTCATGAA ATATGGTGTG GCCCAAATAA GCAGTGTTTT 1920
TGACGTAGAT GGTACTTTTG GCACATGTGA GTATGTGACT TTGTAATCTG TTGTAGCTAT 1980
GCGAAAGCTC TGTTGGTTGG AGTTGTCTTC TCTTCTCATC CCTTGTGTAT GGAGCTTGTG 2040
GTAGCCTATT AATTAGAAAA CTGTTATTTA ACAAATGCTA GTTTACTGAT GGGCCGCGGG 2100
TCACAGCTTG TCTTATTTTG CCCTCGATTG CATCAGATGA AGTTGTGGCT TGCTGCGATA 2160
2161Nucleotide Fasta Sequence
>Si006243m|Class-I|Setaria italica
GAGACCCAACCCAAAAGCTCCGTCAGGAAAGGGAAGCGAGAGCACCGCCCGCGAATCCGGCGATGGACGCGTCGGCCGGCGGCGGCGGGAACTCCCTGCCGACCACCGGCGCGGACGGCTCGAAGCGCCGCGTCTGCTACTTCTACGACGCGGAGGTGGGCAACTACTACTACGGGCAGGGGCACCCGATGAAGCCGCACCGCATCCGCATGACCCACGCGCTGCTCGGCCGCTACGGCCTCCTCGACCAGATGCAGGTGCTCCGCCCCCACCCCGCCCGCGACCGCGACCTCTGCCGCTTCCACGCCGACGACTACGTCGCCTTCCTCCGCTCCGTCACCCCCGAGACGCAGCAGGACCAGATCCGCGCGCTCAAGCGCTTCAACGTCGGCGAGGACTGCCCCGTCTTCGACGGGCTCTACAGCTTCTGCCAGACCTACGCGGGGGGATCCGTCGGCGGCGCCGTCAAGCTCAACCACGGCCACGACATCGCCATCAACTGGGCCGGCGGCCTCCACCACGCCAAGAAGTGCGAGGCCTCCGGGTTCTGCTATGTCAATGACATCGTCCTCGCCATCCTCGAGCTCCTCAAGTATCATCAGCGCGTTCTGTACGTCGATATTGATATCCACCACGGGGATGGCGTGGAGGAGGCATTTTACACCACGGACCGGGTGATGACAGTATCGTTCCACAAATTTGGGGATTATTTCCCTGGGACGGGGGACATTCGTGATGTTGGGCACTCGAAGGGGAAGTATTACTCCCTCAATGTCCCATTGGATGATGGTATTGATGACGAGAGCTACCAGTCATTATTCAAGCCGATTATGGGCAAGGTGATGGAGGTTTTCAACCCTGGTGCGGTTGTGCTTCAGTGTGGTGCGGATTCCTTGTCGGGAGACAGGTTGGGCTGTTTCAACCTATCTATTAAGGGGCACGCGGAGTGCGTGAGATTCATGAGGTCCTTCAATGTCCCACTGTTGTTGCTTGGTGGTGGTGGGTACACCATAAGAAATGTTGCACGCTGTTGGTGCTACGAGACAGGAGTTGCGCTTGGTCATGAGCTCACTGACAAGATGCCCCCTAATGAGTATTATGAGTATTTTGGTCCAGATTACACTCTACATGTTGCTCCAAGTAATATGGAGAACAAAAACACACGGCATCAATTGGATGATATAAGATCAAAACTTCTTGATAATCTATCAAAACTCCGACATGCTCCTAGTGTCCAATTTCAAGAACGACCTCCAGAGGCCGAGTTACCAGAGCAAGATGAAGATAAAGAGAACCCTGATGAAAGACGTGATGCTGATTCTGATGTGGAAATGAATGATGCCAAGCCTTTGGAGGACTCTGGAAGGAGGAGCAACATACAAGGTGTAAGAATGAAGAAAGAACCTGCTGAGACAGAGGCAACTGACCTGGATGTTAATAGTGTAGCTGCAGAACATTCAAGAGGCAATGGACCTGTTGCTGATGGAGTTGGTTCCTCAAAACAAACCCTGCCTAATGATGCAAGTCCAATGGCCGTAGACGAACCAGGTGCTCAGAAAGTTGAAACAGAGAGCTCAAACAAATTGCAGGACCAACCAACGATGCAACAGAAGCCATAATCGGGCACCTTAACTTAGTACCTGATGCAATTGCATCTGTAGCCTGTAGATTCTTTTTTTCATGTTCGTTGACCGTAGACAAGCCGTGACAGTTGAAAAGCTTTAGCAGGGAGCTGAAACAAATGCAATTGGAACAGATTATGCATCTGAACCCATGATATTTTGATCATTACATTTGAGTTTCTAACATCTGCAAATGATAGTTTTGTTTCGTCATGGAAACCTTATCCTTAACCCCAAGCTGCTGCAAAGGAATTGATGTCGTCATGAAATATGGTGTGGCCCAAATAAGCAGTGTTTTTGACGTAGATGGTACTTTTGGCACATGTGAGTATGTGACTTTGTAATCTGTTGTAGCTATGCGAAAGCTCTGTTGGTTGGAGTTGTCTTCTCTTCTCATCCCTTGTGTATGGAGCTTGTGGTAGCCTATTAATTAGAAAACTGTTATTTAACAAATGCTAGTTTACTGATGGGCCGCGGGTCACAGCTTGTCTTATTTTGCCCTCGATTGCATCAGATGAAGTTGTGGCTTGCTGCGATA
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
