WERAM Information

Tag Content
WERAM ID WERAM-Pot-0087
Ensembl Protein ID POPTR_0007s04260.1
Gene Name POPTR_0007s04260g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0007s04260 POPTR_0007s04260.1 POPTR_0007s04260.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 2.00e-12 48.5 34 125
Organism Populus trichocarpa
Domain Profile
  HDAC Class-I
         class-1.txt 158 khkrvlyididlhhGDgveeafyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePe 248
                          +krv  id+d+hhG+g ++afy    ++        +  +Pgt ++++ g+++g    +n+Pl+ g  D   +++f +vi +  ++f+P+
  POPTR_0007s04260.1  34 GLKRVSIIDFDVHHGNGTNDAFYDDPNIF--------N--YPGTCKIDELGHGDGEGTFLNLPLQRGSGDIAISTVFDEVIVPSAQRFKPD 114
                         579*********************99985........3..7************************************************** PP
         class-1.txt 249 avvlqcGaDsl 259
                         + +   G D+ 
  POPTR_0007s04260.1 115 IFLASAGYDGP 125
                         ****9999974 PP
Protein Sequence
(Fasta)		EAHPEFHLRV PAIVSALEKK EVTSKLIMPN RVHGLKRVSI IDFDVHHGNG TNDAFYDDPN 60
IFNYPGTCKI DELGHGDGEG TFLNLPLQRG SGDIAISTVF DEVIVPSAQR FKPDIFLASA 120
GYDGPICGGR CVFFLEGGYN LDSVSYSVAG YFHAFIGEKS LASEFDNPAI N 171
Nucleotide Sequence
(Fasta)		GAGGCACATC CAGAATTCCA TCTTAGAGTT CCTGCAATTG TGAGTGCTCT TGAAAAGAAA 60
GAGGTCACTT CGAAGCTCAT CATGCCCAAT CGTGTGCATG GATTAAAACG AGTCTCAATC 120
ATTGATTTTG ATGTTCACCA TGGGAATGGG ACGAATGATG CATTTTATGA TGATCCAAAT 180
ATATTCAACT ATCCAGGTAC TTGTAAAATT GACGAGCTAG GTCATGGAGA TGGTGAAGGT 240
ACATTTTTAA ATCTGCCTCT ACAAAGAGGC TCAGGTGATA TTGCCATTAG CACCGTATTT 300
GATGAAGTCA TTGTACCAAG TGCTCAAAGG TTCAAGCCAG ATATTTTTCT TGCTTCTGCT 360
GGGTATGATG GTCCTATCTG TGGTGGCCGT TGTGTGTTTT TCTTGGAGGG AGGATACAAC 420
CTTGATTCTG TTTCATATTC AGTGGCGGGC TACTTTCATG CTTTCATTGG GGAGAAGAGT 480
TTGGCATCTG AGTTTGATAA CCCTGCCATC AACTAA 517
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Viv-0021 VIT_04s0044g01510.t01 Vitis vinifera 66 2e-57 218
WERAM-Thc-0007 EOX92582 Theobroma cacao 63 1e-55 213
WERAM-Glm-0050 GLYMA05G32600.1 Glycine max 63 4e-55 211
WERAM-Met-0183 AET04758 Medicago truncatula 63 5e-55 210
WERAM-Prp-0071 EMJ12704 Prunus persica 63 1e-54 209
WERAM-Art-0110 AT4G33470.1 Arabidopsis thaliana 59 3e-51 197
WERAM-Amt-0065 ERN18144 Amborella trichopoda 59 6e-51 196
WERAM-Sol-0006 Solyc01g009110.2.1 Solanum lycopersicum 59 2e-50 195
WERAM-Arl-0142 scaffold_700814.1 Arabidopsis lyrata 59 2e-50 195
WERAM-Mua-0145 GSMUA_AchrUn_randomP00520_001 Musa acuminata 57 9e-50 192
WERAM-Brr-0061 Bra011444.1-P Brassica rapa 57 2e-49 191
WERAM-Zem-0142 GRMZM2G456473_P01 Zea mays 58 3e-49 191
WERAM-Org-0113 ORGLA12G0047100.1 Oryza glaberrima 58 4e-49 191
WERAM-Orb-0120 OBART12G04910.1 Oryza barthii 58 4e-49 191
WERAM-Orni-0103 ONIVA09G16260.1 Oryza nivara 58 4e-49 190
WERAM-Ori-0128 BGIOSGA037104-PA Oryza indica 58 4e-49 190
WERAM-Orl-0008 KN538685.1_FGP052 Oryza longistaminata 58 4e-49 190
WERAM-Orp-0110 OPUNC12G04860.1 Oryza punctata 58 5e-49 190
WERAM-Orgl-0115 OGLUM12G05720.1 Oryza glumaepatula 58 5e-49 190
WERAM-Orm-0105 OMERI12G03370.1 Oryza meridionalis 58 5e-49 190
WERAM-Bro-0004 Bo1g008110.1 Brassica oleracea 57 5e-49 190
WERAM-Sei-0036 Si010171m Setaria italica 56 1e-48 189
WERAM-Ors-0108 OS12T0182700-01 Oryza sativa 57 1e-48 189
WERAM-Orr-0120 ORUFI12G05690.1 Oryza rufipogon 57 1e-48 189
WERAM-Sob-0054 Sb03g038950.1 Sorghum bicolor 58 2e-48 188
WERAM-Lep-0114 LPERR12G04530.1 Leersia perrieri 57 2e-48 188
WERAM-Brd-0117 BRADI4G40960.1 Brachypodium distachyon 57 4e-48 187
WERAM-Tra-0217 Traes_5BS_F36388166.1 Triticum aestivum 56 3e-47 184
WERAM-Tru-0036 TRIUR3_18154-P1 Triticum urartu 56 4e-47 184
WERAM-Orbr-0123 OB12G14780.1 Oryza brachyantha 55 8e-47 183
WERAM-Php-0127 PP1S85_154V6.1 Physcomitrella patens 53 4e-46 181
WERAM-Sem-0034 EFJ07952 Selaginella moellendorffii 51 5e-41 164
WERAM-Osl-0036 ABP01312 Ostreococcus lucimarinus 41 4e-30 127
WERAM-Chr-0006 EDP01653 Chlamydomonas reinhardtii 40 1e-24 109
WERAM-Asg-0010 AAS51704 Ashbya gossypii 35 1e-20 96.3
WERAM-Dar-0170 ENSDARP00000100072.2 Danio rerio 31 8e-20 93.6
WERAM-Caa-0034 KGT64501 Candida albicans 32 2e-19 92.4
WERAM-Cag-0018 CAG60803 Candida glabrata 34 2e-19 92.0
WERAM-Pof-0205 ENSPFOP00000017061.2 Poecilia formosa 31 4e-19 91.3
WERAM-Scp-0036 SPBC800.03.1:pep Schizosaccharomyces pombe 33 5e-19 91.3
WERAM-Xim-0214 ENSXMAP00000017502.1 Xiphophorus maculatus 31 5e-19 90.9
WERAM-Kll-0020 CAG99415 Kluyveromyces lactis 35 5e-19 90.9
WERAM-Sac-0037 YNL021W Saccharomyces cerevisiae 33 6e-19 90.5
WERAM-Orn-0072 ENSONIP00000007998.1 Oreochromis niloticus 31 6e-19 90.5
WERAM-Xet-0073 ENSXETP00000023344.3 Xenopus tropicalis 32 8e-19 90.1
WERAM-Miv-0034 MVLG_04888T0 Microbotryum violaceum 33 8e-19 90.1
WERAM-Ten-0172 ENSTNIP00000017010.1 Tetraodon nigroviridis 31 1e-18 90.1
WERAM-Tar-0138 ENSTRUP00000030067.1 Takifugu rubripes 31 1e-18 89.7
WERAM-Leo-0108 ENSLOCP00000014009.1 Lepisosteus oculatus 31 2e-18 89.0
WERAM-Hov-0018 MLOC_16422.1 Hordeum vulgare 36 2e-18 89.0
WERAM-Fia-0119 ENSFALP00000010264.1 Ficedula albicollis 32 2e-18 89.0
WERAM-Fec-0119 ENSFCAP00000011049.3 Felis catus 34 3e-18 88.2
WERAM-Orla-0184 ENSORLP00000021264.2 Oryzias latipes 31 4e-18 88.2
WERAM-Anp-0079 ENSAPLP00000009519.1 Anas platyrhynchos 33 5e-18 87.8
WERAM-Asm-0146 ENSAMXP00000013789.1 Astyanax mexicanus 31 5e-18 87.8
WERAM-Gaga-0107 ENSGALP00000017619.4 Gallus gallus 33 5e-18 87.4
WERAM-Cae-0060 F41H10.6b Caenorhabditis elegans 36 6e-18 87.4
WERAM-Aim-0036 ENSAMEP00000002564.1 Ailuropoda melanoleuca 34 6e-18 87.4
WERAM-Ptv-0046 ENSPVAP00000004918.1 Pteropus vampyrus 33 6e-18 87.4
WERAM-Anc-0037 ENSACAP00000004435.3 Anolis carolinensis 30 8e-18 87.0
WERAM-Ocp-0153 ENSOPRP00000015747.2 Ochotona princeps 32 8e-18 87.0
WERAM-Ora-0108 ENSOANP00000020481.2 Ornithorhynchus anatinus 31 1e-17 86.3
WERAM-Tag-0050 ENSTGUP00000003338.1 Taeniopygia guttata 31 1e-17 86.3
WERAM-Coi-0028 EAS30926 Coccidioides immitis 34 1e-17 86.3
WERAM-Tut-0141 ENSTTRP00000011664.1 Tursiops truncatus 33 2e-17 85.9
WERAM-Caf-0004 ENSCAFP00000000979.4 Canis familiaris 34 2e-17 85.9
WERAM-Aet-0001 EMT29538 Aegilops tauschii 31 2e-17 85.9
WERAM-Pes-0174 ENSPSIP00000020522.1 Pelodiscus sinensis 31 2e-17 85.9
WERAM-Meg-0023 ENSMGAP00000001752.2 Meleagris gallopavo 31 2e-17 85.5
WERAM-Gaa-0079 ENSGACP00000010554.1 Gasterosteus aculeatus 31 2e-17 85.5
WERAM-Sah-0025 ENSSHAP00000002837.1 Sarcophilus harrisii 30 2e-17 85.5
WERAM-Bot-0106 ENSBTAP00000014602.4 Bos taurus 33 3e-17 85.1
WERAM-Orc-0142 ENSOCUP00000012429.3 Oryctolagus cuniculus 32 3e-17 84.7
WERAM-Pyt-0023 EFQ89752 Pyrenophora teres 34 4e-17 84.7
WERAM-Phn-0010 SNOT_01279 Phaeosphaeria nodorum 34 4e-17 84.7
WERAM-Lem-0023 CBX90551 Leptosphaeria maculans 34 4e-17 84.7
WERAM-Otg-0061 ENSOGAP00000004404.2 Otolemur garnettii 29 5e-17 84.3
WERAM-Mum-0077 ENSMUSP00000008995.8 Mus musculus 30 6e-17 84.3
WERAM-Ran-0135 ENSRNOP00000027622.5 Rattus norvegicus 30 6e-17 84.0
WERAM-Loa-0107 ENSLAFP00000009167.2 Loxodonta africana 31 6e-17 84.0
WERAM-Sot-0015 PGSC0003DMT400014582 Solanum tuberosum 33 6e-17 84.0
WERAM-Mae-0085 ENSMEUP00000008564.1 Macropus eugenii 30 7e-17 84.0
WERAM-Prc-0083 ENSPCAP00000007167.1 Procavia capensis 31 9e-17 83.6
WERAM-Kop-0012 CAY68916 Komagataella pastoris 30 9e-17 83.6
WERAM-Sus-0012 ENSSSCP00000001039.2 Sus scrofa 33 9e-17 83.6
WERAM-Myl-0159 ENSMLUP00000013297.2 Myotis lucifugus 31 1e-16 83.2
WERAM-Ast-0014 CADATEAP00005667 Aspergillus terreus 32 1e-16 83.2
WERAM-Paa-0072 ENSPANP00000008610.1 Papio anubis 30 1e-16 83.2
WERAM-Asc-0002 CADACLAP00000048 Aspergillus clavatus 30 1e-16 83.2
WERAM-Mup-0023 ENSMPUP00000002307.1 Mustela putorius furo 33 1e-16 83.2
WERAM-Gam-0063 ENSGMOP00000006368.1 Gadus morhua 30 1e-16 83.2
WERAM-Pem-0058 ENSPMAP00000006830.1 Petromyzon marinus 32 1e-16 82.8
WERAM-Asn-0017 CADANIAP00004063 Aspergillus nidulans 33 1e-16 82.8
WERAM-Eqc-0086 ENSECAP00000010704.1 Equus caballus 32 2e-16 82.8
WERAM-Drm-0028 FBpp0290988 Drosophila melanogaster 31 2e-16 82.8
WERAM-Lac-0055 ENSLACP00000007918.1 Latimeria chalumnae 33 2e-16 82.4
WERAM-Ere-0042 ENSEEUP00000003697.1 Erinaceus europaeus 31 2e-16 82.4
WERAM-Cap-0143 ENSCPOP00000011770.2 Cavia porcellus 30 2e-16 82.4
WERAM-Chs-0077 ENSCSAP00000002870.1 Chlorocebus sabaeus 30 2e-16 82.0
WERAM-Mam-0226 ENSMMUP00000028518.2 Macaca mulatta 30 2e-16 82.0
WERAM-Scj-0031 EEB08679 Schizosaccharomyces japonicus 30 2e-16 82.0
WERAM-Tas-0117 ENSTSYP00000012457.1 Tarsius syrichta 31 3e-16 82.0
WERAM-Caj-0009 ENSCJAP00000001947.2 Callithrix jacchus 31 3e-16 81.6
WERAM-Pytr-0015 EDU46537 Pyrenophora triticirepentis 34 3e-16 81.6
WERAM-Pat-0158 ENSPTRP00000032389.5 Pan troglodytes 31 3e-16 81.6
WERAM-Poa-0162 ENSPPYP00000019901.2 Pongo abelii 31 3e-16 81.6
WERAM-Nol-0183 ENSNLEP00000020216.1 Nomascus leucogenys 31 3e-16 81.6
WERAM-Hos-0016 ENSP00000410337.2 Homo sapiens 31 4e-16 81.6
WERAM-Vip-0084 ENSVPAP00000007862.1 Vicugna pacos 31 4e-16 81.6
WERAM-Ict-0095 ENSSTOP00000009983.2 Ictidomys tridecemlineatus 30 4e-16 81.3
WERAM-Chg-0033 EAQ86725 Chaetomium globosum 31 4e-16 81.3
Created Date 25-Jun-2016