Tag |
Content |
WERAM ID |
WERAM-Orgl-0108 |
Ensembl Protein ID |
OGLUM11G05620.1 |
Gene Name |
|
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-I |
4.10e-122 |
408.9 |
220 |
543 |
|
Organism |
Oryza glumaepatula |
Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenae....els.kelkkfnvg 89 ++v+y+yd+ +++++++++h+m+p r++++h+Lv yg+ ++++++++ a+ +e+ +fhs ey+++l +pe+ k ++++g OGLUM11G05620.1 220 RRVCYYYDPGIAHIKFSDDHVMVPARVAMAHSLVGVYGMLGDMRRLRTRPATEAEIRRFHSPEYVDLLCDLTPESYAndaaL-RqKAEDHHGIG 312 589**********************************************************************987644431.22445556665 PP class-1.txt 90 ..edcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyt 181 +dcP fd l++yc+ ++G+sl+aa+ L ++ +diainw+GG+hha ++a+GfcyvnDivlai ell +++rv+y+did hhGDgv++af OGLUM11G05620.1 313 geDDCPAFDRLWKYCRGYAGGSLAAARALVDGASDIAINWSGGMHHASACKATGFCYVNDIVLAINELLGTFSRVIYVDIDAHHGDGVQNAFLD 406 227******************************************************************************************* PP class-1.txt 182 tdrvmtvsfhkyge.....effPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnls 270 ++rvmt+sfh+yg+ +ffPg+G ++++g + gk+y+vnvPl+ g++D+ y+++f++++ k +e+f+Pea+vlqcGaDsl+gDrlg +ls OGLUM11G05620.1 407 SNRVMTLSFHRYGKitphkDFFPGSGAINEIGDGAGKHYSVNVPLDAGVRDDVYHTLFEPIVGKAMEVFQPEAIVLQCGADSLSGDRLGGMELS 500 ************85444448************************************************************************** PP class-1.txt 271 ikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313 ++ghaecv+f++ fnlpll+lGGGGYt++ va +w+yetav++ OGLUM11G05620.1 501 VRGHAECVSFLRGFNLPLLLLGGGGYTINHVASTWCYETAVAV 543 ****************************************986 PP
|
Protein Sequence (Fasta) | MATRRDGGRR REGLTAEENS GGDWLSTLPD EILHNVLSFL PAHEAVRTCL LSRRWRNLWR 60 SAPVLRIRHR WVGVERFNKF VNNLLLLRDP VPLDELEFQT YTYWPTKMPR PCIYEVKYAE 120 QWIRHALMCK ARVEHCIVRS LGHEDMVEIE ESSSSMGQLV RFENLERVEN SHITSDQSKT 180 LVAAIPDKSN SGAGMQPNSQ SMATGGNSLP SPSCADDKKR RVCYYYDPGI AHIKFSDDHV 240 MVPARVAMAH SLVGVYGMLG DMRRLRTRPA TEAEIRRFHS PEYVDLLCDL TPESYANDAA 300 LRQKAEDHHG IGGEDDCPAF DRLWKYCRGY AGGSLAAARA LVDGASDIAI NWSGGMHHAS 360 ACKATGFCYV NDIVLAINEL LGTFSRVIYV DIDAHHGDGV QNAFLDSNRV MTLSFHRYGK 420 ITPHKDFFPG SGAINEIGDG AGKHYSVNVP LDAGVRDDVY HTLFEPIVGK AMEVFQPEAI 480 VLQCGADSLS GDRLGGMELS VRGHAECVSF LRGFNLPLLL LGGGGYTINH VASTWCYETA 540 VAVGKEGELP DDIEIPSHGY ELMYKNQGNK LHYQTSTATA ARKRSSSTEV TKGKVLEHLS 600 QVERAPSVQF QERRGGDNAA GVELYYERPP SLEDDEPAQR LHRLCFPAVA KRIRLNA 657Protein Fasta Sequence
>OGLUM11G05620.1|Class-I|Oryza glumaepatula MATRRDGGRRREGLTAEENSGGDWLSTLPDEILHNVLSFLPAHEAVRTCLLSRRWRNLWRSAPVLRIRHRWVGVERFNKFVNNLLLLRDPVPLDELEFQTYTYWPTKMPRPCIYEVKYAEQWIRHALMCKARVEHCIVRSLGHEDMVEIEESSSSMGQLVRFENLERVENSHITSDQSKTLVAAIPDKSNSGAGMQPNSQSMATGGNSLPSPSCADDKKRRVCYYYDPGIAHIKFSDDHVMVPARVAMAHSLVGVYGMLGDMRRLRTRPATEAEIRRFHSPEYVDLLCDLTPESYANDAALRQKAEDHHGIGGEDDCPAFDRLWKYCRGYAGGSLAAARALVDGASDIAINWSGGMHHASACKATGFCYVNDIVLAINELLGTFSRVIYVDIDAHHGDGVQNAFLDSNRVMTLSFHRYGKITPHKDFFPGSGAINEIGDGAGKHYSVNVPLDAGVRDDVYHTLFEPIVGKAMEVFQPEAIVLQCGADSLSGDRLGGMELSVRGHAECVSFLRGFNLPLLLLGGGGYTINHVASTWCYETAVAVGKEGELPDDIEIPSHGYELMYKNQGNKLHYQTSTATAARKRSSSTEVTKGKVLEHLSQVERAPSVQFQERRGGDNAAGVELYYERPPSLEDDEPAQRLHRLCFPAVAKRIRLNA
|
Nucleotide Sequence (Fasta) | ATGGCTACGA GGCGCGACGG CGGCAGGAGA CGCGAGGGAC TCACGGCCGA GGAGAACAGC 60 GGCGGCGACT GGCTTAGCAC CCTCCCGGAC GAGATCCTCC ACAATGTTCT CTCCTTCCTG 120 CCAGCGCACG AGGCCGTGCG GACGTGTCTG CTCTCCCGCC GCTGGCGCAA CCTTTGGAGG 180 TCCGCCCCCG TGCTGCGCAT CAGACACAGA TGGGTGGGTG TGGAGAGGTT CAACAAGTTT 240 GTCAACAATC TTCTGCTCTT GCGCGACCCG GTGCCTCTTG ATGAGCTCGA GTTCCAGACC 300 TACACATACT GGCCTACCAA GATGCCCAGA CCTTGTATCT ACGAGGTCAA GTATGCTGAA 360 CAATGGATCA GGCATGCGCT CATGTGCAAG GCTCGGGTGG AGCACTGTAT AGTTAGATCT 420 CTGGGCCATG AAGATATGGT GGAAATTGAA GAAAGTAGCA GTTCAATGGG ACAATTGGTC 480 CGGTTTGAGA ACCTTGAAAG AGTCGAAAAT AGCCATATAA CCAGCGATCA GTCCAAAACA 540 TTGGTTGCTG CCATCCCCGA CAAGAGTAAC AGTGGTGCCG GCATGCAGCC GAACTCTCAA 600 TCGATGGCCA CCGGGGGGAA CTCGCTGCCG TCGCCGTCGT GCGCCGACGA CAAGAAGCGG 660 CGGGTGTGCT ACTACTACGA CCCCGGCATC GCCCACATCA AATTCAGCGA CGACCATGTC 720 ATGGTGCCCG CCCGCGTCGC CATGGCGCAC AGCCTCGTCG GCGTCTACGG CATGCTCGGC 780 GACATGCGCC GCCTCCGCAC GAGACCCGCC ACGGAGGCGG AGATCCGCCG CTTCCACTCG 840 CCGGAGTACG TCGACCTCCT CTGCGACCTC ACCCCGGAGA GCTACGCCAA CGACGCGGCG 900 CTTCGGCAGA AGGCGGAGGA TCACCACGGC ATCGGCGGCG AAGATGATTG CCCCGCCTTC 960 GACCGCCTCT GGAAGTACTG CCGCGGCTAC GCCGGCGGGT CGCTCGCCGC GGCGCGCGCG 1020 CTCGTCGACG GCGCCTCCGA CATCGCCATC AACTGGTCCG GCGGCATGCA CCACGCCTCC 1080 GCCTGCAAGG CCACCGGCTT CTGCTACGTC AACGACATCG TGCTCGCCAT CAACGAGCTC 1140 CTCGGCACCT TCAGCCGGGT CATCTACGTC GACATCGACG CGCACCACGG CGACGGCGTG 1200 CAGAACGCAT TCTTGGACTC CAACCGGGTC ATGACGCTGT CGTTCCACCG GTACGGCAAA 1260 ATCACGCCCC ACAAGGACTT CTTCCCGGGC TCCGGCGCCA TCAACGAAAT CGGCGACGGC 1320 GCCGGCAAGC ACTACAGCGT GAACGTGCCG CTGGACGCCG GCGTCCGCGA CGACGTGTAC 1380 CACACGCTGT TCGAGCCGAT CGTGGGCAAG GCCATGGAGG TGTTCCAGCC GGAGGCCATC 1440 GTGCTGCAGT GCGGCGCCGA CTCGCTCTCC GGCGACCGCC TCGGCGGCAT GGAGCTATCG 1500 GTGCGGGGCC ACGCGGAGTG CGTCAGCTTC CTCCGCGGGT TCAACCTGCC GCTGCTCCTC 1560 CTCGGCGGCG GCGGCTACAC CATCAACCAC GTCGCCTCCA CGTGGTGCTA CGAGACGGCG 1620 GTCGCCGTCG GCAAGGAGGG GGAGCTCCCC GACGACATAG AGATACCCAG CCACGGCTAC 1680 GAGCTCATGT ACAAGAACCA GGGGAACAAG CTCCATTACC AGACGTCGAC AGCGACGGCG 1740 GCGAGAAAGA GGTCGAGCAG CACGGAGGTC ACCAAGGGGA AGGTGCTCGA GCACCTGTCG 1800 CAGGTCGAGC GCGCGCCGAG CGTGCAGTTC CAGGAGCGAC GCGGCGGCGA CAATGCCGCC 1860 GGAGTTGAGC TCTACTACGA GCGCCCTCCG AGCCTGGAAG ACGACGAACC CGCGCAGAGG 1920 CTGCACCGCC TCTGCTTCCC CGCCGTGGCG AAGCGTATCA GGCTCAATGC CTGA
1975Nucleotide Fasta Sequence
>OGLUM11G05620.1|Class-I|Oryza glumaepatula ATGGCTACGAGGCGCGACGGCGGCAGGAGACGCGAGGGACTCACGGCCGAGGAGAACAGCGGCGGCGACTGGCTTAGCACCCTCCCGGACGAGATCCTCCACAATGTTCTCTCCTTCCTGCCAGCGCACGAGGCCGTGCGGACGTGTCTGCTCTCCCGCCGCTGGCGCAACCTTTGGAGGTCCGCCCCCGTGCTGCGCATCAGACACAGATGGGTGGGTGTGGAGAGGTTCAACAAGTTTGTCAACAATCTTCTGCTCTTGCGCGACCCGGTGCCTCTTGATGAGCTCGAGTTCCAGACCTACACATACTGGCCTACCAAGATGCCCAGACCTTGTATCTACGAGGTCAAGTATGCTGAACAATGGATCAGGCATGCGCTCATGTGCAAGGCTCGGGTGGAGCACTGTATAGTTAGATCTCTGGGCCATGAAGATATGGTGGAAATTGAAGAAAGTAGCAGTTCAATGGGACAATTGGTCCGGTTTGAGAACCTTGAAAGAGTCGAAAATAGCCATATAACCAGCGATCAGTCCAAAACATTGGTTGCTGCCATCCCCGACAAGAGTAACAGTGGTGCCGGCATGCAGCCGAACTCTCAATCGATGGCCACCGGGGGGAACTCGCTGCCGTCGCCGTCGTGCGCCGACGACAAGAAGCGGCGGGTGTGCTACTACTACGACCCCGGCATCGCCCACATCAAATTCAGCGACGACCATGTCATGGTGCCCGCCCGCGTCGCCATGGCGCACAGCCTCGTCGGCGTCTACGGCATGCTCGGCGACATGCGCCGCCTCCGCACGAGACCCGCCACGGAGGCGGAGATCCGCCGCTTCCACTCGCCGGAGTACGTCGACCTCCTCTGCGACCTCACCCCGGAGAGCTACGCCAACGACGCGGCGCTTCGGCAGAAGGCGGAGGATCACCACGGCATCGGCGGCGAAGATGATTGCCCCGCCTTCGACCGCCTCTGGAAGTACTGCCGCGGCTACGCCGGCGGGTCGCTCGCCGCGGCGCGCGCGCTCGTCGACGGCGCCTCCGACATCGCCATCAACTGGTCCGGCGGCATGCACCACGCCTCCGCCTGCAAGGCCACCGGCTTCTGCTACGTCAACGACATCGTGCTCGCCATCAACGAGCTCCTCGGCACCTTCAGCCGGGTCATCTACGTCGACATCGACGCGCACCACGGCGACGGCGTGCAGAACGCATTCTTGGACTCCAACCGGGTCATGACGCTGTCGTTCCACCGGTACGGCAAAATCACGCCCCACAAGGACTTCTTCCCGGGCTCCGGCGCCATCAACGAAATCGGCGACGGCGCCGGCAAGCACTACAGCGTGAACGTGCCGCTGGACGCCGGCGTCCGCGACGACGTGTACCACACGCTGTTCGAGCCGATCGTGGGCAAGGCCATGGAGGTGTTCCAGCCGGAGGCCATCGTGCTGCAGTGCGGCGCCGACTCGCTCTCCGGCGACCGCCTCGGCGGCATGGAGCTATCGGTGCGGGGCCACGCGGAGTGCGTCAGCTTCCTCCGCGGGTTCAACCTGCCGCTGCTCCTCCTCGGCGGCGGCGGCTACACCATCAACCACGTCGCCTCCACGTGGTGCTACGAGACGGCGGTCGCCGTCGGCAAGGAGGGGGAGCTCCCCGACGACATAGAGATACCCAGCCACGGCTACGAGCTCATGTACAAGAACCAGGGGAACAAGCTCCATTACCAGACGTCGACAGCGACGGCGGCGAGAAAGAGGTCGAGCAGCACGGAGGTCACCAAGGGGAAGGTGCTCGAGCACCTGTCGCAGGTCGAGCGCGCGCCGAGCGTGCAGTTCCAGGAGCGACGCGGCGGCGACAATGCCGCCGGAGTTGAGCTCTACTACGAGCGCCCTCCGAGCCTGGAAGACGACGAACCCGCGCAGAGGCTGCACCGCCTCTGCTTCCCCGCCGTGGCGAAGCGTATCAGGCTCAATGCCTGA
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Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |