WERAM Information


Tag Content
WERAM ID WERAM-Orgl-0108
Ensembl Protein ID OGLUM11G05620.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
OGLUM11G05620 OGLUM11G05620.1 OGLUM11G05620.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 4.10e-122 408.9 220 543
Organism Oryza glumaepatula
Domain Profile
  HDAC Class-I

      class-1.txt   1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenae....els.kelkkfnvg 89 
++v+y+yd+ +++++++++h+m+p r++++h+Lv yg+ ++++++++ a+ +e+ +fhs ey+++l +pe+ k ++++g
OGLUM11G05620.1 220 RRVCYYYDPGIAHIKFSDDHVMVPARVAMAHSLVGVYGMLGDMRRLRTRPATEAEIRRFHSPEYVDLLCDLTPESYAndaaL-RqKAEDHHGIG 312
589**********************************************************************987644431.22445556665 PP
class-1.txt 90 ..edcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyt 181
+dcP fd l++yc+ ++G+sl+aa+ L ++ +diainw+GG+hha ++a+GfcyvnDivlai ell +++rv+y+did hhGDgv++af
OGLUM11G05620.1 313 geDDCPAFDRLWKYCRGYAGGSLAAARALVDGASDIAINWSGGMHHASACKATGFCYVNDIVLAINELLGTFSRVIYVDIDAHHGDGVQNAFLD 406
227******************************************************************************************* PP
class-1.txt 182 tdrvmtvsfhkyge.....effPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnls 270
++rvmt+sfh+yg+ +ffPg+G ++++g + gk+y+vnvPl+ g++D+ y+++f++++ k +e+f+Pea+vlqcGaDsl+gDrlg +ls
OGLUM11G05620.1 407 SNRVMTLSFHRYGKitphkDFFPGSGAINEIGDGAGKHYSVNVPLDAGVRDDVYHTLFEPIVGKAMEVFQPEAIVLQCGADSLSGDRLGGMELS 500
************85444448************************************************************************** PP
class-1.txt 271 ikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
++ghaecv+f++ fnlpll+lGGGGYt++ va +w+yetav++
OGLUM11G05620.1 501 VRGHAECVSFLRGFNLPLLLLGGGGYTINHVASTWCYETAVAV 543
****************************************986 PP

Protein Sequence
(Fasta)
MATRRDGGRR REGLTAEENS GGDWLSTLPD EILHNVLSFL PAHEAVRTCL LSRRWRNLWR 60
SAPVLRIRHR WVGVERFNKF VNNLLLLRDP VPLDELEFQT YTYWPTKMPR PCIYEVKYAE 120
QWIRHALMCK ARVEHCIVRS LGHEDMVEIE ESSSSMGQLV RFENLERVEN SHITSDQSKT 180
LVAAIPDKSN SGAGMQPNSQ SMATGGNSLP SPSCADDKKR RVCYYYDPGI AHIKFSDDHV 240
MVPARVAMAH SLVGVYGMLG DMRRLRTRPA TEAEIRRFHS PEYVDLLCDL TPESYANDAA 300
LRQKAEDHHG IGGEDDCPAF DRLWKYCRGY AGGSLAAARA LVDGASDIAI NWSGGMHHAS 360
ACKATGFCYV NDIVLAINEL LGTFSRVIYV DIDAHHGDGV QNAFLDSNRV MTLSFHRYGK 420
ITPHKDFFPG SGAINEIGDG AGKHYSVNVP LDAGVRDDVY HTLFEPIVGK AMEVFQPEAI 480
VLQCGADSLS GDRLGGMELS VRGHAECVSF LRGFNLPLLL LGGGGYTINH VASTWCYETA 540
VAVGKEGELP DDIEIPSHGY ELMYKNQGNK LHYQTSTATA ARKRSSSTEV TKGKVLEHLS 600
QVERAPSVQF QERRGGDNAA GVELYYERPP SLEDDEPAQR LHRLCFPAVA KRIRLNA 657
Nucleotide Sequence
(Fasta)
ATGGCTACGA GGCGCGACGG CGGCAGGAGA CGCGAGGGAC TCACGGCCGA GGAGAACAGC 60
GGCGGCGACT GGCTTAGCAC CCTCCCGGAC GAGATCCTCC ACAATGTTCT CTCCTTCCTG 120
CCAGCGCACG AGGCCGTGCG GACGTGTCTG CTCTCCCGCC GCTGGCGCAA CCTTTGGAGG 180
TCCGCCCCCG TGCTGCGCAT CAGACACAGA TGGGTGGGTG TGGAGAGGTT CAACAAGTTT 240
GTCAACAATC TTCTGCTCTT GCGCGACCCG GTGCCTCTTG ATGAGCTCGA GTTCCAGACC 300
TACACATACT GGCCTACCAA GATGCCCAGA CCTTGTATCT ACGAGGTCAA GTATGCTGAA 360
CAATGGATCA GGCATGCGCT CATGTGCAAG GCTCGGGTGG AGCACTGTAT AGTTAGATCT 420
CTGGGCCATG AAGATATGGT GGAAATTGAA GAAAGTAGCA GTTCAATGGG ACAATTGGTC 480
CGGTTTGAGA ACCTTGAAAG AGTCGAAAAT AGCCATATAA CCAGCGATCA GTCCAAAACA 540
TTGGTTGCTG CCATCCCCGA CAAGAGTAAC AGTGGTGCCG GCATGCAGCC GAACTCTCAA 600
TCGATGGCCA CCGGGGGGAA CTCGCTGCCG TCGCCGTCGT GCGCCGACGA CAAGAAGCGG 660
CGGGTGTGCT ACTACTACGA CCCCGGCATC GCCCACATCA AATTCAGCGA CGACCATGTC 720
ATGGTGCCCG CCCGCGTCGC CATGGCGCAC AGCCTCGTCG GCGTCTACGG CATGCTCGGC 780
GACATGCGCC GCCTCCGCAC GAGACCCGCC ACGGAGGCGG AGATCCGCCG CTTCCACTCG 840
CCGGAGTACG TCGACCTCCT CTGCGACCTC ACCCCGGAGA GCTACGCCAA CGACGCGGCG 900
CTTCGGCAGA AGGCGGAGGA TCACCACGGC ATCGGCGGCG AAGATGATTG CCCCGCCTTC 960
GACCGCCTCT GGAAGTACTG CCGCGGCTAC GCCGGCGGGT CGCTCGCCGC GGCGCGCGCG 1020
CTCGTCGACG GCGCCTCCGA CATCGCCATC AACTGGTCCG GCGGCATGCA CCACGCCTCC 1080
GCCTGCAAGG CCACCGGCTT CTGCTACGTC AACGACATCG TGCTCGCCAT CAACGAGCTC 1140
CTCGGCACCT TCAGCCGGGT CATCTACGTC GACATCGACG CGCACCACGG CGACGGCGTG 1200
CAGAACGCAT TCTTGGACTC CAACCGGGTC ATGACGCTGT CGTTCCACCG GTACGGCAAA 1260
ATCACGCCCC ACAAGGACTT CTTCCCGGGC TCCGGCGCCA TCAACGAAAT CGGCGACGGC 1320
GCCGGCAAGC ACTACAGCGT GAACGTGCCG CTGGACGCCG GCGTCCGCGA CGACGTGTAC 1380
CACACGCTGT TCGAGCCGAT CGTGGGCAAG GCCATGGAGG TGTTCCAGCC GGAGGCCATC 1440
GTGCTGCAGT GCGGCGCCGA CTCGCTCTCC GGCGACCGCC TCGGCGGCAT GGAGCTATCG 1500
GTGCGGGGCC ACGCGGAGTG CGTCAGCTTC CTCCGCGGGT TCAACCTGCC GCTGCTCCTC 1560
CTCGGCGGCG GCGGCTACAC CATCAACCAC GTCGCCTCCA CGTGGTGCTA CGAGACGGCG 1620
GTCGCCGTCG GCAAGGAGGG GGAGCTCCCC GACGACATAG AGATACCCAG CCACGGCTAC 1680
GAGCTCATGT ACAAGAACCA GGGGAACAAG CTCCATTACC AGACGTCGAC AGCGACGGCG 1740
GCGAGAAAGA GGTCGAGCAG CACGGAGGTC ACCAAGGGGA AGGTGCTCGA GCACCTGTCG 1800
CAGGTCGAGC GCGCGCCGAG CGTGCAGTTC CAGGAGCGAC GCGGCGGCGA CAATGCCGCC 1860
GGAGTTGAGC TCTACTACGA GCGCCCTCCG AGCCTGGAAG ACGACGAACC CGCGCAGAGG 1920
CTGCACCGCC TCTGCTTCCC CGCCGTGGCG AAGCGTATCA GGCTCAATGC CTGA 1975
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orni-0113 ONIVA11G06000.1 Oryza nivara 88 0.0 885
WERAM-Ori-0118 BGIOSGA034344-PA Oryza indica 96 0.0 866
WERAM-Orl-0006 KN538683.1_FGP175 Oryza longistaminata 96 0.0 866
WERAM-Orp-0105 OPUNC11G05960.1 Oryza punctata 82 0.0 842
WERAM-Ors-0100 OS11T0200000-01 Oryza sativa 96 0.0 838
WERAM-Orb-0112 OBART11G05910.1 Oryza barthii 86 0.0 697
WERAM-Lep-0052 LPERR05G13220.1 Leersia perrieri 74 0.0 637
WERAM-Orbr-0119 OB11G14740.1 Oryza brachyantha 68 7e-159 558
WERAM-Orr-0114 ORUFI11G05890.1 Oryza rufipogon 73 2e-158 556
WERAM-Sob-0048 Sb03g026250.1 Sorghum bicolor 58 1e-134 478
WERAM-Orm-0006 OMERI01G19130.1 Oryza meridionalis 58 6e-134 475
WERAM-Aet-0080 EMT05969 Aegilops tauschii 64 6e-132 468
WERAM-Brd-0084 BRADI3G44780.1 Brachypodium distachyon 55 1e-131 468
WERAM-Sei-0017 Si004835m Setaria italica 54 3e-118 423
WERAM-Thc-0026 EOX98961 Theobroma cacao 52 9e-111 398
WERAM-Pot-0112 POPTR_0009s17200.1 Populus trichocarpa 51 2e-110 397
WERAM-Glm-0156 GLYMA13G06010.3 Glycine max 52 4e-110 396
WERAM-Viv-0086 VIT_14s0006g01820.t01 Vitis vinifera 52 5e-110 395
WERAM-Bro-0021 Bo1g151980.1 Brassica oleracea 51 5e-109 392
WERAM-Brr-0202 Bra040131.1-P Brassica rapa 51 6e-109 392
WERAM-Sot-0088 PGSC0003DMT400076252 Solanum tuberosum 51 8e-109 392
WERAM-Prp-0056 EMJ02177 Prunus persica 51 9e-109 391
WERAM-Sol-0120 Solyc09g091440.2.1 Solanum lycopersicum 51 1e-108 391
WERAM-Art-0112 AT4G38130.1 Arabidopsis thaliana 51 2e-108 390
WERAM-Zem-0099 GRMZM2G172883_P01 Zea mays 51 3e-108 390
WERAM-Arl-0038 fgenesh1_pm.C_scaffold_7000002 Arabidopsis lyrata 52 5e-108 389
WERAM-Tra-0253 Traes_6AS_5CF7CCD9E.1 Triticum aestivum 51 3e-107 387
WERAM-Met-0084 KEH36404 Medicago truncatula 51 3e-107 386
WERAM-Php-0050 PP1S223_52V6.1 Physcomitrella patens 51 9e-106 381
WERAM-Amt-0016 ERM94967 Amborella trichopoda 49 1e-105 381
WERAM-Hov-0020 MLOC_17056.1 Hordeum vulgare 50 2e-104 377
WERAM-Org-0090 ORGLA08G0103000.1 Oryza glaberrima 50 7e-103 372
WERAM-Sem-0132 EFJ35052 Selaginella moellendorffii 49 7e-102 369
WERAM-Trv-0003 EHK19072 Trichoderma virens 46 2e-95 347
WERAM-Mua-0114 GSMUA_Achr8P04190_001 Musa acuminata 49 2e-95 347
WERAM-Asni-0020 CADANGAP00005938 Aspergillus niger 45 2e-94 344
WERAM-Scs-0023 EDO03342 Sclerotinia sclerotiorum 46 7e-94 342
WERAM-Trr-0017 EGR48353 Trichoderma reesei 46 1e-93 342
WERAM-Coi-0024 EAS33504 Coccidioides immitis 45 2e-93 341
WERAM-Gag-0026 GGTG_08607T0 Gaeumannomyces graminis 47 3e-93 340
WERAM-Gaga-0034 ENSGALP00000005212.3 Gallus gallus 46 3e-93 340
WERAM-Tag-0022 ENSTGUP00000001473.1 Taeniopygia guttata 46 4e-93 339
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 45 5e-93 339
WERAM-Crn-0023 AAW44291 Cryptococcus neoformans 50 5e-93 339
WERAM-Asfu-0015 CADAFUAP00003503 Aspergillus fumigatus 45 7e-93 338
WERAM-Asc-0037 CADACLAP00008612 Aspergillus clavatus 44 9e-93 338
WERAM-Asm-0120 ENSAMXP00000012237.1 Astyanax mexicanus 46 1e-92 338
WERAM-Drm-0018 FBpp0073173 Drosophila melanogaster 46 2e-92 337
WERAM-Map-0015 MAPG_05105T0 Magnaporthe poae 46 2e-92 337
WERAM-Ova-0221 ENSOARP00000022517.1 Ovis aries 45 2e-92 337
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 45 2e-92 337
WERAM-Ran-0062 ENSRNOP00000012854.5 Rattus norvegicus 45 3e-92 337
WERAM-Mum-0093 ENSMUSP00000099657.4 Mus musculus 45 3e-92 337
WERAM-Loa-0056 ENSLAFP00000004079.2 Loxodonta africana 45 3e-92 337
WERAM-Ocp-0006 ENSOPRP00000000780.1 Ochotona princeps 45 3e-92 337
WERAM-Ptv-0152 ENSPVAP00000012567.1 Pteropus vampyrus 45 4e-92 336
WERAM-Mup-0173 ENSMPUP00000015122.1 Mustela putorius furo 45 4e-92 336
WERAM-Orc-0030 ENSOCUP00000003186.2 Oryctolagus cuniculus 45 4e-92 336
WERAM-Poa-0013 ENSPPYP00000001838.2 Pongo abelii 45 5e-92 336
WERAM-Hos-0092 ENSP00000362649.3 Homo sapiens 45 5e-92 336
WERAM-Gog-0132 ENSGGOP00000011454.2 Gorilla gorilla 45 5e-92 336
WERAM-Anc-0033 ENSACAP00000004062.3 Anolis carolinensis 46 5e-92 336
WERAM-Nol-0026 ENSNLEP00000003167.1 Nomascus leucogenys 45 6e-92 336
WERAM-Pug-0005 EFP76878 Puccinia graminis 50 6e-92 335
WERAM-Cap-0092 ENSCPOP00000006985.2 Cavia porcellus 45 6e-92 335
WERAM-Otg-0072 ENSOGAP00000005101.2 Otolemur garnettii 45 6e-92 335
WERAM-Asn-0024 CADANIAP00005952 Aspergillus nidulans 44 7e-92 335
WERAM-Orn-0136 ENSONIP00000014285.1 Oreochromis niloticus 45 2e-91 334
WERAM-Tar-0085 ENSTRUP00000016627.1 Takifugu rubripes 45 2e-91 334
WERAM-Orla-0197 ENSORLP00000022529.1 Oryzias latipes 45 3e-91 333
WERAM-Mao-0017 MGG_05857T0 Magnaporthe oryzae 46 4e-91 333
WERAM-Mel-0028 EGG09787 Melampsora laricipopulina 46 4e-91 333
WERAM-Lab-0002 EDR16061 Laccaria bicolor 46 4e-91 333
WERAM-Xim-0061 ENSXMAP00000005239.1 Xiphophorus maculatus 45 4e-91 333
WERAM-Pof-0181 ENSPFOP00000015600.1 Poecilia formosa 45 5e-91 333
WERAM-Dan-0175 ENSDNOP00000033349.1 Dasypus novemcinctus 45 5e-91 332
WERAM-Chg-0005 EAQ93036 Chaetomium globosum 44 5e-91 332
WERAM-Osl-0001 ABO94696 Ostreococcus lucimarinus 45 5e-91 332
WERAM-Ved-0020 EGY15146 Verticillium dahliae 45 5e-91 332
WERAM-Miv-0036 MVLG_05319T0 Microbotryum violaceum 45 6e-91 332
WERAM-Chr-0001 EDP02188 Chlamydomonas reinhardtii 47 8e-91 332
WERAM-Xet-0037 ENSXETP00000011480.3 Xenopus tropicalis 45 1e-90 332
WERAM-Ten-0060 ENSTNIP00000007837.1 Tetraodon nigroviridis 44 1e-90 331
WERAM-Caf-0116 ENSCAFP00000015619.3 Canis familiaris 45 1e-90 331
WERAM-Myl-0152 ENSMLUP00000012593.2 Myotis lucifugus 45 2e-90 331
WERAM-Leo-0176 ENSLOCP00000020984.1 Lepisosteus oculatus 46 2e-90 330
WERAM-Cae-0005 C53A5.3 Caenorhabditis elegans 46 3e-90 330
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 46 4e-90 329
WERAM-Gaa-0093 ENSGACP00000012045.1 Gasterosteus aculeatus 46 5e-90 329
WERAM-Mod-0165 ENSMODP00000022264.3 Monodelphis domestica 46 5e-90 329
WERAM-Ict-0111 ENSSTOP00000011457.2 Ictidomys tridecemlineatus 46 5e-90 329
WERAM-Paa-0030 ENSPANP00000015145.1 Papio anubis 46 6e-90 329
WERAM-Fia-0139 ENSFALP00000011453.1 Ficedula albicollis 46 6e-90 329
WERAM-Chs-0191 ENSCSAP00000011772.1 Chlorocebus sabaeus 46 6e-90 329
WERAM-Cag-0003 CAG57932 Candida glabrata 44 6e-90 329
WERAM-Gam-0211 ENSGMOP00000020496.1 Gadus morhua 45 7e-90 329
WERAM-Sus-0028 ENSSSCP00000004781.2 Sus scrofa 46 8e-90 328
WERAM-Pes-0020 ENSPSIP00000004435.1 Pelodiscus sinensis 45 9e-90 328
WERAM-Pat-0155 ENSPTRP00000049696.3 Pan troglodytes 46 1e-89 328
WERAM-Dar-0035 ENSDARP00000051798.4 Danio rerio 45 1e-89 328
WERAM-Aim-0151 ENSAMEP00000013919.1 Ailuropoda melanoleuca 46 2e-89 328
WERAM-Caa-0018 KGT69072 Candida albicans 44 2e-89 327
WERAM-Tut-0167 ENSTTRP00000014262.1 Tursiops truncatus 45 3e-89 327
WERAM-Asg-0034 AAS54885 Ashbya gossypii 44 4e-89 326
WERAM-Usm-0011 UM02065P0 Ustilago maydis 46 5e-89 326
WERAM-Kop-0004 CAY67954 Komagataella pastoris 49 5e-89 326
WERAM-Sac-0039 YNL330C Saccharomyces cerevisiae 49 1e-88 325
Created Date 25-Jun-2016