Tag |
Content |
WERAM ID |
WERAM-Sus-0028 |
Ensembl Protein ID |
ENSSSCP00000004781.2 |
Gene Name |
HDAC2 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-I |
6.10e-175 |
581.5 |
72 |
383 |
|
Organism |
Sus scrofa |
Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvg 89 kkv+y+yd d+g+y+ygq+hpmkp+r+++th+L+lnygl++k+ei++p+ka+aee++k+hs+eyi+fl++++p+n++e+sk++++fnvg ENSSSCP00000004781.2 72 KKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVG 160 589************************************************************************************** PP class-1.txt 90 edcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveea 178 edcPvfdglfe+cql+tG+s+++a kLn++++d+a+nwaGGlhhakkseasGfcyvnDivlailellk+h+rvlyidid+hhGDgveea ENSSSCP00000004781.2 161 EDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 249 ***************************************************************************************** PP class-1.txt 179 fyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgef 267 fyttdrvmtvsfhkyge +fPgtGdl+d+ga+kgkyyavn+P++dgidDesy +ifk++iskv+e+++P+avvlqcGaDsl+gDrlg+f ENSSSCP00000004781.2 250 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCF 337 *****************.*********************************************************************** PP class-1.txt 268 nlsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313 nl++kgha+cv++vk+fnlpll+lGGGGYt+rnvaRcwtyetav+l ENSSSCP00000004781.2 338 NLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVAL 383 *******************************************987 PP
|
Protein Sequence (Fasta) | AGRYRALPAP PPRLPLACLS PQDCQFNLHP SPFLSAPSRG GSSSSSRSPS PEAAAAAVAG 60 EPMAYSQGGG KKKVCYYYDG DIGNYYYGQG HPMKPHRIRM THNLLLNYGL YRKMEIYRPH 120 KATAEEMTKY HSDEYIKFLR SIRPDNMSEY SKQMQRFNVG EDCPVFDGLF EFCQLSTGGS 180 VAGAVKLNRQ QTDMAVNWAG GLHHAKKSEA SGFCYVNDIV LAILELLKYH QRVLYIDIDI 240 HHGDGVEEAF YTTDRVMTVS FHKYGEYFPG TGDLRDIGAG KGKYYAVNFP MRDGIDDESY 300 GQIFKPIISK VMEMYQPSAV VLQCGADSLS GDRLGCFNLT VKGHAKCVEV VKTFNLPLLM 360 LGGGGYTIRN VARCWTYETA VALDCEIPNE LPYNDYFEYF GPDFKLHISP SNMTNQNTPE 420 YMEKIKQRLF ENLRMLPHAP GVQMQAIPED AVHEDSGDED GEDPDKRISI RASDKRIACD 480 EEFSDSEDEG EGGRRNVADH KKGAKKARIE EDKKETEDKK ADVKEEDKSK DNSGEKTDTK 540 GAKSEQLSNP Protein Fasta Sequence
>ENSSSCP00000004781.2|Class-I|Sus scrofa AGRYRALPAPPPRLPLACLSPQDCQFNLHPSPFLSAPSRGGSSSSSRSPSPEAAAAAVAGEPMAYSQGGGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEEFSDSEDEGEGGRRNVADHKKGAKKARIEEDKKETEDKKADVKEEDKSKDNSGEKTDTKGAKSEQLSNP
|
Nucleotide Sequence (Fasta) | CATTAGGAGG CCTCTTTACC CAGGACTGAA GAGGCCTCTT TCTCGGGTCG TGTCCCCTCT 60 TCCCCCGTGG AGTCGCAGTG GATGCATCCC ACCTCCCCTC GGCCTCCGGA GGTGGTTTGG 120 CTGCCCCCTC CCCCTCCCCA GTGTCGCGAG TTGGCGCCGC TGCCACCCCC CGGTCCGCGC 180 TCTCGGCCCC TCGGCCGGGC GGTACCGAGC CCTCCCGGCA CCCCCTCCTC GCCTCCCTCT 240 GGCCTGCCTT TCCCCGCAGG ACTGCCAGTT CAACCTTCAC CCCAGCCCTT TTCTTTCGGC 300 GCCGAGCCGC GGCGGCAGCA GCAGCAGCAG CAGGAGTCCG AGCCCGGAGG CGGCGGCGGC 360 GGCGGTGGCC GGGGAGCCCA TGGCGTACAG TCAGGGAGGC GGCAAGAAGA AAGTCTGCTA 420 CTACTATGAT GGTGATATTG GAAATTATTA TTATGGACAG GGTCACCCCA TGAAACCTCA 480 TAGAATCCGC ATGACGCATA ACTTGCTGCT AAATTATGGC TTATATAGAA AGATGGAAAT 540 ATATAGGCCC CATAAAGCCA CTGCTGAAGA AATGACAAAA TACCACAGTG ATGAATACAT 600 CAAATTTCTG CGTTCAATAA GGCCAGATAA CATGTCTGAG TATAGTAAGC AGATGCAGAG 660 ATTTAATGTT GGAGAGGATT GTCCAGTCTT TGATGGACTC TTTGAATTTT GTCAGCTTTC 720 AACTGGTGGC TCAGTTGCTG GGGCTGTGAA GTTAAACCGA CAACAAACTG ATATGGCTGT 780 TAACTGGGCT GGAGGATTAC ACCATGCTAA GAAATCAGAA GCATCAGGAT TCTGTTATGT 840 TAATGATATT GTGCTTGCCA TCCTTGAGTT ACTAAAGTAT CATCAGAGAG TCTTATATAT 900 TGATATTGAT ATCCATCATG GTGATGGTGT TGAAGAAGCT TTTTATACAA CAGATCGTGT 960 AATGACTGTA TCATTCCATA AATATGGGGA ATACTTTCCT GGAACAGGAG ACTTGAGGGA 1020 TATTGGTGCA GGAAAAGGCA AATACTATGC TGTCAATTTT CCAATGAGAG ATGGTATAGA 1080 TGATGAATCA TATGGGCAGA TATTTAAACC TATTATCTCA AAAGTGATGG AGATGTATCA 1140 ACCTAGTGCT GTGGTGTTAC AATGTGGTGC TGACTCATTA TCTGGTGATA GACTTGGTTG 1200 CTTCAATCTG ACAGTCAAAG GTCACGCTAA ATGTGTGGAA GTTGTAAAAA CTTTCAATTT 1260 ACCGTTATTA ATGCTGGGAG GAGGTGGATA CACAATCCGT AATGTTGCTC GATGTTGGAC 1320 ATATGAGACC GCAGTCGCCC TTGATTGTGA GATTCCCAAT GAATTGCCAT ATAATGATTA 1380 CTTTGAGTAT TTTGGACCGG ACTTCAAGCT GCATATTAGT CCTTCAAACA TGACAAACCA 1440 GAACACTCCA GAATATATGG AAAAGATAAA ACAGCGTTTA TTTGAAAATT TACGCATGTT 1500 GCCTCATGCA CCTGGTGTCC AAATGCAAGC TATTCCAGAA GATGCAGTTC ATGAAGACAG 1560 TGGAGATGAA GATGGAGAAG ATCCAGACAA GAGAATTTCT ATTCGAGCAT CAGACAAACG 1620 GATAGCGTGT GATGAAGAAT TCTCAGATTC AGAGGACGAA GGGGAAGGAG GCCGTAGAAA 1680 TGTGGCTGAT CATAAGAAAG GAGCAAAGAA AGCTAGAATT GAAGAAGACA AGAAGGAAAC 1740 AGAGGACAAA AAAGCAGATG TTAAGGAAGA AGATAAATCC AAGGACAATA GTGGTGAAAA 1800 AACAGATACC AAAGGAGCCA AATCAGAACA GCTCAGCAAC CCTTGAATTT GAGAGTTTCA 1860 CCAATTTCAG AAACCACAAA AAAGTGAGAA AATATTGGGA AGAAAAATGT TTTCTTTTTG 1920 AAGACATCTG GCTTCGTTTT ATACTACTTT GGCATGGACT GTATTTATTT TCAAAATTGC 1980 TTTTTTTGTT TTTGTTTTTC TTGGCAAGTT TTATTGTGAG TTTTCTAATT ATGAAGCAAA 2040 ATTTCTTTTC TCCACCATGC TTTATGTGAT AGTATTTAAA ATTGATGTGC ATTATTATGT 2100 CAAAAACCTG ATCTATTAAA GAAGTAATTG GCCTTTCTGA GCTGATTTTT CCATCTTTTG 2160 TAATTATCTT TATTAAAAAA TTGTACTTGG ATTGTCTTTT GTCTGTTTAT TACAACATGG 2220 AGTCTTTTCT CATAAGCTAG TGACATGATC TTTTCTTTAG AAATAGAATA CACTATAGGT 2280 GAACGATACT GATTACAGCT TCAAAAACAT GCAACATCGT TTCTTCAGCA AAGAGTATTT 2340 TCCATATTGT TATTTCTTAG TATCATAGGA GTTGTGCCGT CTTGTCCTTT ATAGGTTAAC 2400 TGGTTAATAT TGAAGATTGA TATCTCATTA TCATAATTTA TCTCTGAAAT TAATGATACA 2460 AGCTATGCAA TTGAGATATA GGAGTTATCT TTGAGCTGAA CCAAAGAGTC AAAAAATTGA 2520 AAATGGAAAT TGAGTTGAAA AAAGAAATCT ATAATCAGAG GAGGAAACTA GCTATACGTG 2580 ACTTTTGCCA TCCCTACGTA TATACCAAGT AGACAAGGAG TTGTATGGTT GTATTTGATC 2640 AGAGGAACCT TTCTGTATTT ATAGTAAGTC TAAAATAAAA ACCTGCTGCT TGGAGAAAAC 2700 CTGGTTCTTC TACTGCATTC TCATGATATT TGGGTTCCAT TATTACACCC AGGTTTTCAA 2760 ACCAAGGGAA TAAACACTCA AAGTCATTTA TCATTCAATT TATTGATTGT TTTAAGGCTT 2820 TGTGCAACTG ACTGTAATGG AAATTGTATG GCTGCTCCCA GAGCTTTGCA TCCTGATGGT 2880 AGAAAGAAGA TAAATGGCGT GATTTCTACT ACTAAGATAA GGGAAGCAAT TTTTTTGAGA 2940 AACTTGCTGA AATCAGTGAA CTCTCTCAGC CAAGCCCAAA TTGATTATTT TGAGATTAAA 3000 AAAATGTTTC TTTAAAAGCC CCTGTGTTAC AACATACTTC AGACATTTAC TACAGCACCT 3060 GGGCTTTTGT AGTGAACAGC CATTTTCCCA CCTGTATTTA ATTGATGCTT CACTTTTGTC 3120 TTAT
3125Nucleotide Fasta Sequence
>ENSSSCP00000004781.2|Class-I|Sus scrofa CATTAGGAGGCCTCTTTACCCAGGACTGAAGAGGCCTCTTTCTCGGGTCGTGTCCCCTCTTCCCCCGTGGAGTCGCAGTGGATGCATCCCACCTCCCCTCGGCCTCCGGAGGTGGTTTGGCTGCCCCCTCCCCCTCCCCAGTGTCGCGAGTTGGCGCCGCTGCCACCCCCCGGTCCGCGCTCTCGGCCCCTCGGCCGGGCGGTACCGAGCCCTCCCGGCACCCCCTCCTCGCCTCCCTCTGGCCTGCCTTTCCCCGCAGGACTGCCAGTTCAACCTTCACCCCAGCCCTTTTCTTTCGGCGCCGAGCCGCGGCGGCAGCAGCAGCAGCAGCAGGAGTCCGAGCCCGGAGGCGGCGGCGGCGGCGGTGGCCGGGGAGCCCATGGCGTACAGTCAGGGAGGCGGCAAGAAGAAAGTCTGCTACTACTATGATGGTGATATTGGAAATTATTATTATGGACAGGGTCACCCCATGAAACCTCATAGAATCCGCATGACGCATAACTTGCTGCTAAATTATGGCTTATATAGAAAGATGGAAATATATAGGCCCCATAAAGCCACTGCTGAAGAAATGACAAAATACCACAGTGATGAATACATCAAATTTCTGCGTTCAATAAGGCCAGATAACATGTCTGAGTATAGTAAGCAGATGCAGAGATTTAATGTTGGAGAGGATTGTCCAGTCTTTGATGGACTCTTTGAATTTTGTCAGCTTTCAACTGGTGGCTCAGTTGCTGGGGCTGTGAAGTTAAACCGACAACAAACTGATATGGCTGTTAACTGGGCTGGAGGATTACACCATGCTAAGAAATCAGAAGCATCAGGATTCTGTTATGTTAATGATATTGTGCTTGCCATCCTTGAGTTACTAAAGTATCATCAGAGAGTCTTATATATTGATATTGATATCCATCATGGTGATGGTGTTGAAGAAGCTTTTTATACAACAGATCGTGTAATGACTGTATCATTCCATAAATATGGGGAATACTTTCCTGGAACAGGAGACTTGAGGGATATTGGTGCAGGAAAAGGCAAATACTATGCTGTCAATTTTCCAATGAGAGATGGTATAGATGATGAATCATATGGGCAGATATTTAAACCTATTATCTCAAAAGTGATGGAGATGTATCAACCTAGTGCTGTGGTGTTACAATGTGGTGCTGACTCATTATCTGGTGATAGACTTGGTTGCTTCAATCTGACAGTCAAAGGTCACGCTAAATGTGTGGAAGTTGTAAAAACTTTCAATTTACCGTTATTAATGCTGGGAGGAGGTGGATACACAATCCGTAATGTTGCTCGATGTTGGACATATGAGACCGCAGTCGCCCTTGATTGTGAGATTCCCAATGAATTGCCATATAATGATTACTTTGAGTATTTTGGACCGGACTTCAAGCTGCATATTAGTCCTTCAAACATGACAAACCAGAACACTCCAGAATATATGGAAAAGATAAAACAGCGTTTATTTGAAAATTTACGCATGTTGCCTCATGCACCTGGTGTCCAAATGCAAGCTATTCCAGAAGATGCAGTTCATGAAGACAGTGGAGATGAAGATGGAGAAGATCCAGACAAGAGAATTTCTATTCGAGCATCAGACAAACGGATAGCGTGTGATGAAGAATTCTCAGATTCAGAGGACGAAGGGGAAGGAGGCCGTAGAAATGTGGCTGATCATAAGAAAGGAGCAAAGAAAGCTAGAATTGAAGAAGACAAGAAGGAAACAGAGGACAAAAAAGCAGATGTTAAGGAAGAAGATAAATCCAAGGACAATAGTGGTGAAAAAACAGATACCAAAGGAGCCAAATCAGAACAGCTCAGCAACCCTTGAATTTGAGAGTTTCACCAATTTCAGAAACCACAAAAAAGTGAGAAAATATTGGGAAGAAAAATGTTTTCTTTTTGAAGACATCTGGCTTCGTTTTATACTACTTTGGCATGGACTGTATTTATTTTCAAAATTGCTTTTTTTGTTTTTGTTTTTCTTGGCAAGTTTTATTGTGAGTTTTCTAATTATGAAGCAAAATTTCTTTTCTCCACCATGCTTTATGTGATAGTATTTAAAATTGATGTGCATTATTATGTCAAAAACCTGATCTATTAAAGAAGTAATTGGCCTTTCTGAGCTGATTTTTCCATCTTTTGTAATTATCTTTATTAAAAAATTGTACTTGGATTGTCTTTTGTCTGTTTATTACAACATGGAGTCTTTTCTCATAAGCTAGTGACATGATCTTTTCTTTAGAAATAGAATACACTATAGGTGAACGATACTGATTACAGCTTCAAAAACATGCAACATCGTTTCTTCAGCAAAGAGTATTTTCCATATTGTTATTTCTTAGTATCATAGGAGTTGTGCCGTCTTGTCCTTTATAGGTTAACTGGTTAATATTGAAGATTGATATCTCATTATCATAATTTATCTCTGAAATTAATGATACAAGCTATGCAATTGAGATATAGGAGTTATCTTTGAGCTGAACCAAAGAGTCAAAAAATTGAAAATGGAAATTGAGTTGAAAAAAGAAATCTATAATCAGAGGAGGAAACTAGCTATACGTGACTTTTGCCATCCCTACGTATATACCAAGTAGACAAGGAGTTGTATGGTTGTATTTGATCAGAGGAACCTTTCTGTATTTATAGTAAGTCTAAAATAAAAACCTGCTGCTTGGAGAAAACCTGGTTCTTCTACTGCATTCTCATGATATTTGGGTTCCATTATTACACCCAGGTTTTCAAACCAAGGGAATAAACACTCAAAGTCATTTATCATTCAATTTATTGATTGTTTTAAGGCTTTGTGCAACTGACTGTAATGGAAATTGTATGGCTGCTCCCAGAGCTTTGCATCCTGATGGTAGAAAGAAGATAAATGGCGTGATTTCTACTACTAAGATAAGGGAAGCAATTTTTTTGAGAAACTTGCTGAAATCAGTGAACTCTCTCAGCCAAGCCCAAATTGATTATTTTGAGATTAAAAAAATGTTTCTTTAAAAGCCCCTGTGTTACAACATACTTCAGACATTTACTACAGCACCTGGGCTTTTGTAGTGAACAGCCATTTTCCCACCTGTATTTAATTGATGCTTCACTTTTGTCTTAT
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |