WERAM Information

Tag Content
WERAM ID WERAM-Loa-0056
Ensembl Protein ID ENSLAFP00000004079.2
Gene Name HDAC1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSLAFG00000004870.2 ENSLAFT00000004873.2 ENSLAFP00000004079.2
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 9.80e-176 584.1 9 320
Organism Loxodonta africana
Domain Profile
  HDAC Class-I
           class-1.txt   1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvg 89 
                           +kv+y+yd dvg+y+ygq+hpmkp+r+++th+L+lnygl++k+ei++p+ka+aee++k+hs++yi+fl++++p+n++e+sk++++fnvg
  ENSLAFP00000004079.2   9 RKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVG 97 
                           589************************************************************************************** PP
           class-1.txt  90 edcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveea 178
                           edcPvfdglfe+cql++G+s+++a kLnk+++dia+nwaGGlhhakkseasGfcyvnDivlailellk+h+rvlyidid+hhGDgveea
  ENSLAFP00000004079.2  98 EDCPVFDGLFEFCQLSAGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186
                           ***************************************************************************************** PP
           class-1.txt 179 fyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgef 267
                           fyttdrvmtvsfhkyge +fPgtGdl+d+ga+kgkyyavn+Pl+dgidDesye+if++viskv+e+f+P+avvlqcG+Dsl+gDrlg+f
  ENSLAFP00000004079.2 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFRPVISKVMEMFQPSAVVLQCGSDSLSGDRLGCF 274
                           *****************.*********************************************************************** PP
           class-1.txt 268 nlsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
                           nl+ikgh++cv+fv++fnlp+l+lGGGGYt+rnvaRcwtyetav+l
  ENSLAFP00000004079.2 275 NLTIKGHSKCVEFVRNFNLPMLMLGGGGYTIRNVARCWTYETAVAL 320
                           *******************************************975 PP
Protein Sequence
(Fasta)		MAQTQGTKRK VCYYYDGDVG NYYYGQGHPM KPHRIRMTHN LLLNYGLYRK MEIYRPHKAN 60
AEEMTKYHSD DYIKFLRSIR PDNMSEYSKQ MQRFNVGEDC PVFDGLFEFC QLSAGGSVAS 120
AVKLNKQQTD IAVNWAGGLH HAKKSEASGF CYVNDIVLAI LELLKYHQRV LYIDIDIHHG 180
DGVEEAFYTT DRVMTVSFHK YGEYFPGTGD LRDIGAGKGK YYAVNYPLRD GIDDESYEAI 240
FRPVISKVME MFQPSAVVLQ CGSDSLSGDR LGCFNLTIKG HSKCVEFVRN FNLPMLMLGG 300
GGYTIRNVAR CWTYETAVAL STDIPNELPY NDYFEYFGPD FKLHISPSNM TNQNTNEYLE 360
KIKQRLFENL RMLPHAPGVQ MQAIPEDAIP EESGDEDEED PDKRISICSS DKRIACEEEF 420
SDSDEEGEGG RKNSSNFKKA KRVKTEDEKE KDPEEKKEVT EEEKTKEEKP EAKGVKEEVK 480
LA 482
Nucleotide Sequence
(Fasta)		ATGGCGCAGA CTCAGGGCAC CAAGAGGAAA GTCTGTTACT ACTACGACGG GGATGTTGGA 60
AATTACTATT ATGGACAAGG TCACCCAATG AAGCCTCACC GAATCCGCAT GACTCACAAT 120
TTGCTGCTCA ACTATGGTCT CTACCGAAAG ATGGAAATCT ATCGCCCTCA CAAAGCCAAT 180
GCTGAGGAGA TGACCAAGTA CCACAGTGAT GACTACATTA AATTCTTGCG CTCCATCCGC 240
CCAGACAACA TGTCTGAGTA CAGTAAGCAG ATGCAGAGAT TCAACGTTGG TGAGGACTGT 300
CCAGTATTTG ATGGCCTGTT TGAGTTCTGT CAGTTGTCTG CTGGTGGATC TGTGGCAAGT 360
GCTGTGAAAC TTAATAAGCA GCAGACGGAC ATCGCTGTGA ATTGGGCTGG GGGCCTGCAC 420
CATGCAAAGA AGTCCGAGGC ATCTGGCTTC TGTTACGTCA ATGATATCGT CTTGGCCATC 480
CTGGAACTGC TAAAGTATCA CCAGAGGGTG CTGTATATTG ACATTGATAT TCACCATGGT 540
GATGGAGTGG AAGAGGCCTT CTATACCACA GACCGGGTCA TGACTGTGTC CTTTCATAAG 600
TATGGAGAGT ACTTCCCAGG AACAGGGGAC TTACGGGATA TTGGCGCTGG CAAAGGCAAG 660
TATTATGCCG TTAACTACCC GCTCCGAGAT GGGATTGATG ATGAGTCCTA TGAGGCCATT 720
TTCAGGCCGG TCATATCCAA AGTAATGGAG ATGTTCCAGC CTAGTGCAGT CGTCTTACAG 780
TGTGGCTCTG ACTCCCTCTC TGGGGATCGA TTAGGTTGTT TCAATCTGAC CATCAAAGGG 840
CATTCCAAGT GTGTGGAATT TGTGAGGAAT TTCAACCTTC CGATGCTGAT GCTGGGAGGA 900
GGTGGCTACA CCATTCGTAA TGTCGCCAGG TGTTGGACGT ATGAAACAGC TGTGGCCCTG 960
AGCACAGATA TCCCTAACGA GCTTCCATAC AATGACTACT TTGAATACTT TGGACCAGAT 1020
TTCAAACTTC ACATCAGTCC TTCCAATATG ACCAACCAGA ACACTAATGA GTACTTGGAG 1080
AAGATCAAAC AGAGACTATT TGAGAACCTG AGAATGTTGC CCCACGCACC TGGGGTTCAA 1140
ATGCAGGCGA TTCCTGAGGA TGCCATTCCA GAGGAAAGCG GTGATGAGGA TGAAGAGGAC 1200
CCTGACAAAC GCATCTCGAT CTGTTCCTCT GACAAACGAA TTGCTTGTGA AGAAGAGTTC 1260
TCTGACTCCG ATGAGGAGGG AGAGGGTGGC CGCAAGAACT CTTCCAACTT CAAAAAAGCC 1320
AAGAGAGTCA AAACAGAGGA TGAAAAAGAG AAAGACCCAG AAGAGAAGAA AGAAGTCACA 1380
GAAGAAGAGA AAACCAAGGA GGAGAAGCCG GAAGCCAAAG GGGTCAAGGA GGAGGTCAAG 1440
TTGGCCTGA
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Ptv-0152 ENSPVAP00000012567.1 Pteropus vampyrus 98 0.0 824
WERAM-Mum-0093 ENSMUSP00000099657.4 Mus musculus 98 0.0 823
WERAM-Hos-0092 ENSP00000362649.3 Homo sapiens 98 0.0 823
WERAM-Gog-0132 ENSGGOP00000011454.2 Gorilla gorilla 98 0.0 823
WERAM-Otg-0072 ENSOGAP00000005101.2 Otolemur garnettii 98 0.0 822
WERAM-Ran-0062 ENSRNOP00000012854.5 Rattus norvegicus 98 0.0 822
WERAM-Ova-0221 ENSOARP00000022517.1 Ovis aries 98 0.0 820
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 98 0.0 820
WERAM-Cap-0092 ENSCPOP00000006985.2 Cavia porcellus 98 0.0 820
WERAM-Nol-0026 ENSNLEP00000003167.1 Nomascus leucogenys 98 0.0 820
WERAM-Orc-0030 ENSOCUP00000003186.2 Oryctolagus cuniculus 98 0.0 819
WERAM-Mup-0173 ENSMPUP00000015122.1 Mustela putorius furo 98 0.0 818
WERAM-Poa-0013 ENSPPYP00000001838.2 Pongo abelii 97 0.0 818
WERAM-Ocp-0006 ENSOPRP00000000780.1 Ochotona princeps 98 0.0 815
WERAM-Caf-0116 ENSCAFP00000015619.3 Canis familiaris 98 0.0 813
WERAM-Myl-0152 ENSMLUP00000012593.2 Myotis lucifugus 98 0.0 810
WERAM-Chs-0011 ENSCSAP00000016960.1 Chlorocebus sabaeus 98 0.0 808
WERAM-Aim-0087 ENSAMEP00000008076.1 Ailuropoda melanoleuca 97 0.0 807
WERAM-Dan-0175 ENSDNOP00000033349.1 Dasypus novemcinctus 97 0.0 807
WERAM-Pat-0210 ENSPTRP00000060659.1 Pan troglodytes 98 0.0 806
WERAM-Eqc-0125 ENSECAP00000014039.1 Equus caballus 98 0.0 801
WERAM-Gaga-0034 ENSGALP00000005212.3 Gallus gallus 95 0.0 801
WERAM-Sus-0201 ENSSSCP00000023024.1 Sus scrofa 98 0.0 799
WERAM-Tag-0022 ENSTGUP00000001473.1 Taeniopygia guttata 95 0.0 798
WERAM-Fec-0127 ENSFCAP00000011581.3 Felis catus 98 0.0 796
WERAM-Anc-0033 ENSACAP00000004062.3 Anolis carolinensis 94 0.0 793
WERAM-Anp-0136 ENSAPLP00000014652.1 Anas platyrhynchos 95 0.0 785
WERAM-Meg-0047 ENSMGAP00000004521.2 Meleagris gallopavo 95 0.0 781
WERAM-Fia-0005 ENSFALP00000000658.1 Ficedula albicollis 94 0.0 779
WERAM-Pes-0020 ENSPSIP00000004435.1 Pelodiscus sinensis 91 0.0 778
WERAM-Mod-0160 ENSMODP00000021783.2 Monodelphis domestica 93 0.0 764
WERAM-Leo-0014 ENSLOCP00000002993.1 Lepisosteus oculatus 92 0.0 761
WERAM-Xet-0037 ENSXETP00000011480.3 Xenopus tropicalis 92 0.0 761
WERAM-Tar-0062 ENSTRUP00000012875.1 Takifugu rubripes 92 0.0 754
WERAM-Gaa-0072 ENSGACP00000009568.1 Gasterosteus aculeatus 92 0.0 752
WERAM-Orn-0090 ENSONIP00000010308.1 Oreochromis niloticus 92 0.0 751
WERAM-Dar-0035 ENSDARP00000051798.4 Danio rerio 90 0.0 749
WERAM-Gam-0211 ENSGMOP00000020496.1 Gadus morhua 91 0.0 749
WERAM-Mam-0083 ENSMMUP00000013015.2 Macaca mulatta 98 0.0 748
WERAM-Prc-0059 ENSPCAP00000005589.1 Procavia capensis 93 0.0 748
WERAM-Orla-0192 ENSORLP00000021872.1 Oryzias latipes 92 0.0 747
WERAM-Xim-0229 ENSXMAP00000019038.1 Xiphophorus maculatus 90 0.0 745
WERAM-Pof-0034 ENSPFOP00000002952.2 Poecilia formosa 90 0.0 745
WERAM-Tut-0167 ENSTTRP00000014262.1 Tursiops truncatus 89 0.0 744
WERAM-Ten-0200 ENSTNIP00000020022.1 Tetraodon nigroviridis 92 0.0 738
WERAM-Asm-0120 ENSAMXP00000012237.1 Astyanax mexicanus 90 0.0 738
WERAM-Ict-0111 ENSSTOP00000011457.2 Ictidomys tridecemlineatus 89 0.0 733
WERAM-Paa-0030 ENSPANP00000015145.1 Papio anubis 89 0.0 732
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 89 0.0 730
WERAM-Ere-0068 ENSEEUP00000005465.1 Erinaceus europaeus 90 0.0 728
WERAM-Sah-0134 ENSSHAP00000014467.1 Sarcophilus harrisii 90 0.0 728
WERAM-Caj-0052 ENSCJAP00000008409.2 Callithrix jacchus 90 0.0 723
WERAM-Ora-0034 ENSOANP00000005760.2 Ornithorhynchus anatinus 90 0.0 721
WERAM-Drm-0018 FBpp0073173 Drosophila melanogaster 82 0.0 710
WERAM-Tas-0085 ENSTSYP00000008588.1 Tarsius syrichta 88 0.0 709
WERAM-Cii-0014 ENSCINP00000005410.3 Ciona intestinalis 88 0.0 704
WERAM-Dio-0132 ENSDORP00000012520.1 Dipodomys ordii 83 0.0 663
WERAM-Mae-0030 ENSMEUP00000002192.1 Macropus eugenii 84 0.0 650
WERAM-Vip-0012 ENSVPAP00000001394.1 Vicugna pacos 80 0.0 650
WERAM-Mim-0092 ENSMICP00000008598.1 Microcebus murinus 85 0.0 647
WERAM-Tub-0143 ENSTBEP00000015305.1 Tupaia belangeri 88 8e-180 627
WERAM-Pem-0096 ENSPMAP00000010023.1 Petromyzon marinus 80 1e-179 626
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 69 1e-164 577
WERAM-Soa-0003 ENSSARP00000000316.1 Sorex araneus 80 1e-164 577
WERAM-Cae-0005 C53A5.3 Caenorhabditis elegans 70 1e-164 576
WERAM-Asc-0037 CADACLAP00008612 Aspergillus clavatus 69 4e-163 572
WERAM-Asfu-0015 CADAFUAP00003503 Aspergillus fumigatus 68 5e-163 571
WERAM-Asn-0024 CADANIAP00005952 Aspergillus nidulans 68 1e-162 570
WERAM-Asni-0020 CADANGAP00005938 Aspergillus niger 68 1e-162 570
WERAM-Brd-0020 BRADI1G37290.1 Brachypodium distachyon 69 1e-161 567
WERAM-Coi-0024 EAS33504 Coccidioides immitis 68 1e-161 566
WERAM-Tra-0318 Traes_7DL_578CF3F0D.2 Triticum aestivum 69 3e-161 565
WERAM-Php-0088 PP1S351_29V6.1 Physcomitrella patens 67 6e-161 564
WERAM-Map-0015 MAPG_05105T0 Magnaporthe poae 69 2e-160 562
WERAM-Chh-0084 ENSCHOP00000009394.1 Choloepus hoffmanni 72 3e-160 562
WERAM-Gag-0026 GGTG_08607T0 Gaeumannomyces graminis 69 4e-160 561
WERAM-Scs-0023 EDO03342 Sclerotinia sclerotiorum 66 1e-158 556
WERAM-Ved-0020 EGY15146 Verticillium dahliae 67 1e-158 556
WERAM-Mao-0017 MGG_05857T0 Magnaporthe oryzae 68 2e-158 556
WERAM-Amt-0072 ERN20455 Amborella trichopoda 67 2e-158 556
WERAM-Sem-0128 EFJ38890 Selaginella moellendorffii 67 2e-158 556
WERAM-Viv-0108 VIT_17s0000g09070.t01 Vitis vinifera 68 4e-158 555
WERAM-Prp-0060 EMJ10303 Prunus persica 68 5e-158 555
WERAM-Hov-0001 MLOC_10109.1 Hordeum vulgare 68 4e-157 551
WERAM-Tum-0029 CAZ85499 Tuber melanosporum 67 4e-157 551
WERAM-Glm-0046 GLYMA05G02540.1 Glycine max 67 6e-157 551
WERAM-Trv-0003 EHK19072 Trichoderma virens 68 6e-157 551
WERAM-Osl-0002 ABO94711 Ostreococcus lucimarinus 68 1e-156 550
WERAM-Ori-0039 BGIOSGA012324-PA Oryza indica 68 4e-156 548
WERAM-Orb-0066 OBART06G19560.1 Oryza barthii 68 4e-156 548
WERAM-Ors-0059 OS06T0583400-01 Oryza sativa 68 5e-156 548
WERAM-Thc-0029 EOY20838 Theobroma cacao 66 6e-156 548
WERAM-Brr-0180 Bra035858.1-P Brassica rapa 67 6e-156 548
WERAM-Orr-0068 ORUFI06G20660.1 Oryza rufipogon 68 7e-156 547
WERAM-Orgl-0064 OGLUM06G20570.1 Oryza glumaepatula 68 9e-156 547
WERAM-Met-0084 KEH36404 Medicago truncatula 69 9e-156 547
WERAM-Orp-0064 OPUNC06G17670.1 Oryza punctata 69 1e-155 547
WERAM-Orbr-0074 OB06G27130.1 Oryza brachyantha 69 1e-155 546
WERAM-Bro-0169 Bo9g017510.1 Brassica oleracea 66 1e-155 546
WERAM-Trr-0017 EGR48353 Trichoderma reesei 68 2e-155 546
WERAM-Zyt-0024 Mycgr3P51809 Zymoseptoria tritici 66 4e-155 545
WERAM-Pot-0131 POPTR_0012s08570.1 Populus trichocarpa 66 6e-155 544
WERAM-Caa-0018 KGT69072 Candida albicans 65 7e-155 544
WERAM-Sob-0135 Sb10g022820.1 Sorghum bicolor 69 9e-155 544
WERAM-Sei-0026 Si006243m Setaria italica 69 1e-154 543
WERAM-Orm-0063 OMERI06G19730.1 Oryza meridionalis 68 2e-154 542
WERAM-Arl-0113 fgenesh2_kg.8__ 2309__ AT5G63110.1 Arabidopsis lyrata 66 3e-154 542
WERAM-Art-0148 AT5G63110.1 Arabidopsis thaliana 66 3e-154 542
WERAM-Zem-0056 GRMZM2G081474_P01 Zea mays 69 3e-154 542
WERAM-Kop-0004 CAY67954 Komagataella pastoris 66 3e-154 542
WERAM-Kll-0018 CAG99124 Kluyveromyces lactis 65 4e-154 541
WERAM-Yal-0022 CAG79885 Yarrowia lipolytica 65 7e-154 541
WERAM-Orni-0065 ONIVA06G23170.1 Oryza nivara 68 1e-153 540
WERAM-Chg-0005 EAQ93036 Chaetomium globosum 62 1e-153 540
WERAM-Ast-0010 CADATEAP00004306 Aspergillus terreus 66 1e-153 540
WERAM-Sol-0082 Solyc06g071680.2.1 Solanum lycopersicum 65 2e-153 540
WERAM-Cag-0003 CAG57932 Candida glabrata 66 2e-153 540
WERAM-Sot-0088 PGSC0003DMT400076252 Solanum tuberosum 68 2e-153 539
WERAM-Asg-0034 AAS54885 Ashbya gossypii 65 4e-153 538
WERAM-Aet-0051 EMT16627 Aegilops tauschii 68 6e-153 538
WERAM-Lep-0066 LPERR06G16070.1 Leersia perrieri 68 1e-152 537
WERAM-Phn-0005 SNOT_00508 Phaeosphaeria nodorum 67 5e-151 531
WERAM-Sac-0039 YNL330C Saccharomyces cerevisiae 65 9e-151 530
WERAM-Pyt-0025 EFQ89270 Pyrenophora teres 64 2e-150 529
WERAM-Scp-0033 SPBC36.05c.1:pep Schizosaccharomyces pombe 64 3e-150 529
WERAM-Lem-0026 CBX91288 Leptosphaeria maculans 67 5e-150 528
WERAM-Spr-0005 CBQ70764 Sporisorium reilianum 62 9e-150 527
WERAM-Pytr-0033 EDU43668 Pyrenophora triticirepentis 66 2e-149 526
WERAM-Lac-0087 ENSLACP00000011092.1 Latimeria chalumnae 63 7e-149 524
WERAM-Miv-0036 MVLG_05319T0 Microbotryum violaceum 62 2e-148 523
WERAM-Nec-0007 EFNCRP00000000997 Neurospora crassa 65 2e-148 523
WERAM-Scj-0003 EEB05565 Schizosaccharomyces japonicus 63 3e-148 522
Created Date 25-Jun-2016