WERAM Information

Tag Content
WERAM ID WERAM-Lac-0128
Ensembl Protein ID ENSLACP00000015194.1
Gene Name HDAC1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSLACG00000013376.1 ENSLACT00000015300.1 ENSLACP00000015194.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 1.40e-96 324 9 324
Organism Latimeria chalumnae
Domain Profile
  HDAC Class-I
           class-1.txt   1 kkvayaydedvg.eyhygqkhpmkpkrlsltheL..vlnyglskkleivkpkkasaeellkfhseeyieflkkvepenae.elskelkk 85 
                           kkv+y+yd ++g +++y  +h+ k+ rl+ t +L  + ++g     +i+  k +s+  ll +h + yi fl++v++ ++   +s+ +++
  ENSLACP00000015194.1   9 KKVCYYYDGEIGlQFSYRFSHVFKKGRLKCTLKLdsMAQFGCFMGPKIFLHK-NSTFTLLIYHCHSYIGFLTSVKKRENIaIYSEPMQR 96 
                           589********7689***************9999445889999888998765.56667889*************976555267777887 PP
           class-1.txt  86 fnv..gedcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhG 172
                            +   +e c   + l   + ++ G+  ++a kLnk+++diainwaGGlhhakkseasGfcyvnDivlailellk+ +  +   i    G
  ENSLACP00000015194.1  97 VDAafNEICE-KSSLLARSWVVVGGKTAGAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKMEQECTGFKIGGWAG 184
                           7641145554.567778899999****************************************************************** PP
           class-1.txt 173 DgveeafyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslag 261
                           +      ++ d ++ +   k +  f P tG+l+d+ga+kgkyyavn+Pl+dgidDesye+ifk+++ kv+e+++P+a+vlqcGaDsl+g
  ENSLACP00000015194.1 185 EWKASRTNKRDSLLPCPGRKRSA-FSPVTGNLQDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPIMCKVMEMYQPSAIVLQCGADSLSG 272
                           *99999999999****9999998.***************************************************************** PP
           class-1.txt 262 DrlgefnlsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
                           Drlg+fnl+ikgha+cv+f+ksfnlpll+lGGGGYt+rnvaRcwtyetav+l
  ENSLACP00000015194.1 273 DRLGCFNLTIKGHAKCVEFMKSFNLPLLMLGGGGYTIRNVARCWTYETAVAL 324
                           *************************************************987 PP
Protein Sequence
(Fasta)		MALSQGTKKK VCYYYDGEIG LQFSYRFSHV FKKGRLKCTL KLDSMAQFGC FMGPKIFLHK 60
NSTFTLLIYH CHSYIGFLTS VKKRENIAIY SEPMQRVDAA FNEICEKSSL LARSWVVVGG 120
KTAGAVKLNK QQTDIAINWA GGLHHAKKSE ASGFCYVNDI VLAILELLKM EQECTGFKIG 180
GWAGEWKASR TNKRDSLLPC PGRKRSAFSP VTGNLQDIGA GKGKYYAVNY PLRDGIDDES 240
YEAIFKPIMC KVMEMYQPSA IVLQCGADSL SGDRLGCFNL TIKGHAKCVE FMKSFNLPLL 300
MLGGGGYTIR NVARCWTYET AVALDSEIPN ELPYNDYFEY FGPDFKLHIS PSNMTNQNTN 360
EYLEKIKQRL FENLRMLPHA PGVQMQAIPE DAVQEDSGDE DEEDPNKRIS IRASDKRIAC 420
DEEFSDSEDE GEGGRRNIAS YKKAKRVKTE EEKDSEEKKD VKEEDKTKED KAEVKGKKKK 480
NHSY 484
Nucleotide Sequence
(Fasta)		ATGGCGCTGA GTCAAGGAAC AAAGAAGAAA GTTTGCTATT ATTATGATGG TGAGATTGGA 60
CTTCAGTTTT CTTATCGGTT CTCGCATGTC TTTAAAAAAG GCAGATTAAA ATGCACTTTA 120
AAACTAGACA GCATGGCTCA GTTTGGATGC TTTATGGGTC CTAAAATTTT CCTGCATAAA 180
AATAGCACAT TTACATTATT AATATACCAT TGTCATAGCT ATATTGGCTT TCTTACTAGT 240
GTAAAAAAAA GAGAGAATAT TGCTATATAC TCGGAGCCAA TGCAGCGTGT TGATGCTGCT 300
TTTAATGAGA TATGCGAAAA GAGCAGTCTA CTCGCTCGCA GTTGGGTGGT GGTCGGGGGG 360
AAAACAGCTG GAGCTGTTAA GCTGAACAAG CAGCAGACGG ACATTGCCAT CAACTGGGCC 420
GGAGGACTCC ATCATGCCAA GAAATCGGAG GCATCCGGGT TCTGCTACGT GAACGACATT 480
GTCTTAGCCA TCCTGGAGTT GTTGAAGATG GAACAGGAAT GTACAGGATT TAAAATTGGT 540
GGGTGGGCTG GAGAGTGGAA AGCCTCACGG ACAAACAAAA GAGATTCCTT GCTACCCTGC 600
CCAGGAAGGA AGAGGTCAGC ATTTTCTCCC GTCACCGGGA ACCTACAGGA TATTGGAGCA 660
GGGAAAGGCA AGTACTATGC TGTTAACTAT CCCCTCAGAG ATGGAATAGA TGATGAGTCT 720
TATGAGGCCA TATTTAAACC GATTATGTGT AAAGTAATGG AGATGTATCA ACCAAGTGCT 780
ATTGTCCTTC AGTGTGGGGC TGACTCCTTA TCAGGAGATA GGCTTGGCTG CTTCAACTTG 840
ACCATCAAAG GTCATGCTAA GTGTGTGGAG TTTATGAAGA GCTTTAACCT TCCTCTTCTG 900
ATGTTGGGCG GCGGTGGCTA CACAATTCGT AATGTGGCCA GGTGCTGGAC CTACGAAACT 960
GCTGTTGCTC TGGATAGCGA AATTCCAAAC GAACTGCCCT ACAATGATTA CTTTGAGTAT 1020
TTTGGACCAG ATTTCAAACT TCACATCAGT CCCTCTAACA TGACAAACCA GAACACCAAT 1080
GAATACCTGG AGAAGATCAA GCAGCGTCTG TTTGAGAACT TGCGTATGTT ACCCCATGCC 1140
CCTGGTGTTC AGATGCAGGC CATCCCTGAG GATGCAGTGC AGGAGGACAG CGGTGATGAA 1200
GATGAAGAGG ATCCCAACAA ACGCATTTCA ATCCGTGCAT CAGACAAGAG GATAGCTTGT 1260
GATGAGGAGT TCTCGGACTC GGAGGATGAA GGGGAAGGTG GCCGCAGGAA CATCGCCAGC 1320
TATAAGAAAG CAAAGCGTGT CAAGACAGAG GAGGAGAAGG ACAGCGAGGA GAAAAAAGAT 1380
GTGAAAGAGG AAGACAAGAC CAAGGAGGAT AAAGCTGAAG TAAAGGGGAA AAAAAAAAAA 1440
AATCATTCCT AC 1453
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Xim-0229 ENSXMAP00000019038.1 Xiphophorus maculatus 71 1e-154 543
WERAM-Pof-0034 ENSPFOP00000002952.2 Poecilia formosa 71 1e-154 543
WERAM-Tar-0062 ENSTRUP00000012875.1 Takifugu rubripes 71 1e-154 543
WERAM-Dar-0035 ENSDARP00000051798.4 Danio rerio 71 4e-154 541
WERAM-Gaga-0034 ENSGALP00000005212.3 Gallus gallus 68 5e-154 541
WERAM-Anc-0033 ENSACAP00000004062.3 Anolis carolinensis 69 3e-153 539
WERAM-Tag-0022 ENSTGUP00000001473.1 Taeniopygia guttata 69 3e-153 539
WERAM-Orn-0087 ENSONIP00000009730.1 Oreochromis niloticus 70 4e-153 538
WERAM-Cap-0092 ENSCPOP00000006985.2 Cavia porcellus 68 1e-152 536
WERAM-Tut-0167 ENSTTRP00000014262.1 Tursiops truncatus 67 2e-152 536
WERAM-Mum-0093 ENSMUSP00000099657.4 Mus musculus 68 2e-152 536
WERAM-Ran-0062 ENSRNOP00000012854.5 Rattus norvegicus 68 2e-152 536
WERAM-Pes-0020 ENSPSIP00000004435.1 Pelodiscus sinensis 68 2e-152 536
WERAM-Ocp-0006 ENSOPRP00000000780.1 Ochotona princeps 69 3e-152 536
WERAM-Ova-0221 ENSOARP00000022517.1 Ovis aries 68 3e-152 535
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 68 3e-152 535
WERAM-Orla-0151 ENSORLP00000017757.1 Oryzias latipes 69 3e-152 535
WERAM-Orc-0030 ENSOCUP00000003186.2 Oryctolagus cuniculus 68 3e-152 535
WERAM-Otg-0072 ENSOGAP00000005101.2 Otolemur garnettii 68 4e-152 535
WERAM-Nol-0026 ENSNLEP00000003167.1 Nomascus leucogenys 68 4e-152 535
WERAM-Hos-0092 ENSP00000362649.3 Homo sapiens 68 5e-152 535
WERAM-Gog-0132 ENSGGOP00000011454.2 Gorilla gorilla 68 5e-152 535
WERAM-Poa-0013 ENSPPYP00000001838.2 Pongo abelii 68 5e-152 535
WERAM-Ptv-0152 ENSPVAP00000012567.1 Pteropus vampyrus 68 1e-151 533
WERAM-Ten-0109 ENSTNIP00000012136.1 Tetraodon nigroviridis 70 1e-151 533
WERAM-Dan-0175 ENSDNOP00000033349.1 Dasypus novemcinctus 66 3e-151 532
WERAM-Gaa-0093 ENSGACP00000012045.1 Gasterosteus aculeatus 69 3e-151 532
WERAM-Myl-0152 ENSMLUP00000012593.2 Myotis lucifugus 66 4e-151 531
WERAM-Mup-0173 ENSMPUP00000015122.1 Mustela putorius furo 67 5e-151 531
WERAM-Ora-0012 ENSOANP00000001904.1 Ornithorhynchus anatinus 68 2e-150 529
WERAM-Caf-0116 ENSCAFP00000015619.3 Canis familiaris 67 3e-150 529
WERAM-Asm-0120 ENSAMXP00000012237.1 Astyanax mexicanus 70 4e-150 528
WERAM-Xet-0037 ENSXETP00000011480.3 Xenopus tropicalis 70 7e-150 528
WERAM-Gam-0211 ENSGMOP00000020496.1 Gadus morhua 71 1e-149 527
WERAM-Leo-0014 ENSLOCP00000002993.1 Lepisosteus oculatus 71 2e-149 526
WERAM-Aim-0087 ENSAMEP00000008076.1 Ailuropoda melanoleuca 66 2e-149 526
WERAM-Loa-0056 ENSLAFP00000004079.2 Loxodonta africana 66 2e-149 526
WERAM-Ict-0111 ENSSTOP00000011457.2 Ictidomys tridecemlineatus 68 7e-149 524
WERAM-Paa-0030 ENSPANP00000015145.1 Papio anubis 68 7e-149 524
WERAM-Chs-0191 ENSCSAP00000011772.1 Chlorocebus sabaeus 68 7e-149 524
WERAM-Mod-0165 ENSMODP00000022264.3 Monodelphis domestica 68 7e-149 524
WERAM-Fia-0139 ENSFALP00000011453.1 Ficedula albicollis 68 9e-149 524
WERAM-Sus-0028 ENSSSCP00000004781.2 Sus scrofa 68 4e-148 522
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 68 5e-148 521
WERAM-Pat-0155 ENSPTRP00000049696.3 Pan troglodytes 68 1e-147 520
WERAM-Anp-0136 ENSAPLP00000014652.1 Anas platyrhynchos 67 3e-147 519
WERAM-Dio-0132 ENSDORP00000012520.1 Dipodomys ordii 67 4e-146 515
WERAM-Meg-0047 ENSMGAP00000004521.2 Meleagris gallopavo 68 2e-143 506
WERAM-Eqc-0125 ENSECAP00000014039.1 Equus caballus 67 1e-142 503
WERAM-Mam-0083 ENSMMUP00000013015.2 Macaca mulatta 73 3e-142 502
WERAM-Pem-0096 ENSPMAP00000010023.1 Petromyzon marinus 67 5e-142 501
WERAM-Fec-0127 ENSFCAP00000011581.3 Felis catus 69 5e-142 501
WERAM-Sah-0134 ENSSHAP00000014467.1 Sarcophilus harrisii 67 2e-141 499
WERAM-Ere-0068 ENSEEUP00000005465.1 Erinaceus europaeus 68 7e-141 498
WERAM-Caj-0052 ENSCJAP00000008409.2 Callithrix jacchus 68 4e-140 495
WERAM-Tas-0085 ENSTSYP00000008588.1 Tarsius syrichta 72 6e-139 491
WERAM-Prc-0059 ENSPCAP00000005589.1 Procavia capensis 79 8e-135 478
WERAM-Cii-0014 ENSCINP00000005410.3 Ciona intestinalis 61 5e-131 465
WERAM-Drm-0018 FBpp0073173 Drosophila melanogaster 58 1e-129 460
WERAM-Mim-0092 ENSMICP00000008598.1 Microcebus murinus 62 2e-128 457
WERAM-Chh-0084 ENSCHOP00000009394.1 Choloepus hoffmanni 58 8e-124 441
WERAM-Vip-0012 ENSVPAP00000001394.1 Vicugna pacos 58 4e-109 392
WERAM-Soa-0003 ENSSARP00000000316.1 Sorex araneus 57 5e-108 389
WERAM-Tra-0318 Traes_7DL_578CF3F0D.2 Triticum aestivum 51 4e-106 382
WERAM-Cae-0005 C53A5.3 Caenorhabditis elegans 48 7e-106 381
WERAM-Brd-0020 BRADI1G37290.1 Brachypodium distachyon 50 4e-105 379
WERAM-Mae-0135 ENSMEUP00000013494.1 Macropus eugenii 59 2e-103 374
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 45 5e-102 369
WERAM-Tub-0143 ENSTBEP00000015305.1 Tupaia belangeri 56 2e-100 363
WERAM-Orb-0066 OBART06G19560.1 Oryza barthii 51 4e-100 362
WERAM-Ors-0059 OS06T0583400-01 Oryza sativa 51 4e-100 362
WERAM-Coi-0024 EAS33504 Coccidioides immitis 45 6e-100 362
WERAM-Orp-0064 OPUNC06G17670.1 Oryza punctata 51 9e-100 361
WERAM-Orr-0068 ORUFI06G20660.1 Oryza rufipogon 51 1e-99 361
WERAM-Asc-0037 CADACLAP00008612 Aspergillus clavatus 45 1e-99 361
WERAM-Map-0015 MAPG_05105T0 Magnaporthe poae 45 1e-99 361
WERAM-Orgl-0064 OGLUM06G20570.1 Oryza glumaepatula 51 1e-99 361
WERAM-Asn-0024 CADANIAP00005952 Aspergillus nidulans 44 1e-99 360
WERAM-Asni-0020 CADANGAP00005938 Aspergillus niger 45 1e-99 360
WERAM-Gag-0026 GGTG_08607T0 Gaeumannomyces graminis 46 2e-99 360
WERAM-Asfu-0015 CADAFUAP00003503 Aspergillus fumigatus 45 2e-99 360
WERAM-Tru-0006 TRIUR3_03674-P1 Triticum urartu 61 3e-99 359
WERAM-Php-0050 PP1S223_52V6.1 Physcomitrella patens 47 5e-99 358
WERAM-Ori-0039 BGIOSGA012324-PA Oryza indica 51 7e-99 358
WERAM-Kll-0018 CAG99124 Kluyveromyces lactis 45 2e-98 357
WERAM-Sem-0128 EFJ38890 Selaginella moellendorffii 49 2e-98 356
WERAM-Scs-0023 EDO03342 Sclerotinia sclerotiorum 44 2e-98 356
WERAM-Orm-0063 OMERI06G19730.1 Oryza meridionalis 51 4e-98 355
WERAM-Sob-0135 Sb10g022820.1 Sorghum bicolor 50 6e-98 355
WERAM-Zem-0056 GRMZM2G081474_P01 Zea mays 50 6e-98 355
WERAM-Sei-0026 Si006243m Setaria italica 50 1e-97 354
WERAM-Viv-0108 VIT_17s0000g09070.t01 Vitis vinifera 48 1e-97 354
WERAM-Mao-0017 MGG_05857T0 Magnaporthe oryzae 45 1e-97 353
WERAM-Met-0084 KEH36404 Medicago truncatula 49 3e-97 353
WERAM-Amt-0072 ERN20455 Amborella trichopoda 49 3e-97 353
WERAM-Glm-0156 GLYMA13G06010.3 Glycine max 49 4e-97 352
WERAM-Cag-0003 CAG57932 Candida glabrata 45 5e-97 352
WERAM-Lep-0023 LPERR02G07360.1 Leersia perrieri 50 7e-97 352
WERAM-Trv-0003 EHK19072 Trichoderma virens 45 1e-96 351
WERAM-Caa-0018 KGT69072 Candida albicans 44 1e-96 351
WERAM-Ved-0020 EGY15146 Verticillium dahliae 45 1e-96 351
WERAM-Trr-0017 EGR48353 Trichoderma reesei 46 1e-96 351
WERAM-Orbr-0074 OB06G27130.1 Oryza brachyantha 51 1e-96 351
WERAM-Thc-0029 EOY20838 Theobroma cacao 48 2e-96 350
WERAM-Prp-0060 EMJ10303 Prunus persica 49 2e-96 350
WERAM-Ast-0010 CADATEAP00004306 Aspergillus terreus 45 2e-96 350
WERAM-Asg-0034 AAS54885 Ashbya gossypii 44 3e-96 349
WERAM-Osl-0002 ABO94711 Ostreococcus lucimarinus 49 4e-96 349
WERAM-Yal-0022 CAG79885 Yarrowia lipolytica 45 6e-96 348
WERAM-Art-0112 AT4G38130.1 Arabidopsis thaliana 50 8e-96 348
WERAM-Arl-0038 fgenesh1_pm.C_scaffold_7000002 Arabidopsis lyrata 50 9e-96 348
WERAM-Orni-0020 ONIVA02G09910.1 Oryza nivara 50 9e-96 348
WERAM-Hov-0001 MLOC_10109.1 Hordeum vulgare 62 9e-96 348
WERAM-Brr-0202 Bra040131.1-P Brassica rapa 50 1e-95 347
WERAM-Sol-0120 Solyc09g091440.2.1 Solanum lycopersicum 50 1e-95 347
WERAM-Kop-0004 CAY67954 Komagataella pastoris 45 1e-95 347
WERAM-Aet-0051 EMT16627 Aegilops tauschii 51 5e-95 345
WERAM-Bro-0169 Bo9g017510.1 Brassica oleracea 48 7e-95 345
WERAM-Pot-0112 POPTR_0009s17200.1 Populus trichocarpa 49 2e-94 343
WERAM-Chg-0005 EAQ93036 Chaetomium globosum 42 2e-94 343
WERAM-Sot-0088 PGSC0003DMT400076252 Solanum tuberosum 51 3e-94 343
WERAM-Pug-0005 EFP76878 Puccinia graminis 47 8e-94 341
Created Date 25-Jun-2016