| Tag |
Content |
| WERAM ID |
WERAM-Ori-0118 |
| Ensembl Protein ID |
BGIOSGA034344-PA |
| Gene Name |
OsI_12246 |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
4.30e-122 |
408.6 |
19 |
342 |
|
| Organism |
Oryza indica |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenae...els.kelkkfnvg 89
++v+y+yd+ +++++++++h+m+p r++++h+Lv yg+ ++++++++ a+ +e+ +fhs ey+++l+ +pe+ l k ++++g
BGIOSGA034344-PA 19 RRVCYYYDPGIAHIKFSDDHVMVPARVAMAHSLVGVYGMLGDMRRLRTRPATEAEIRRFHSPEYVDLLRDLTPESYAndaALRqKAEGHHGIG 111
589**********************************************************************98764442222444567776 PP
class-1.txt 90 ..edcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafy 180
+dcP fd l++yc+ ++G+sl+aa+ L ++ +diainw+GG+hha ++a+GfcyvnDivlai ell +++rv+y+did hhGDgv++af
BGIOSGA034344-PA 112 gdDDCPAFDRLWKYCRGYAGGSLAAARALVDGASDIAINWSGGMHHASACKATGFCYVNDIVLAINELLGTFSRVIYVDIDAHHGDGVQDAFL 204
2269***************************************************************************************** PP
class-1.txt 181 ttdrvmtvsfhkyge.....effPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefn 268
++rvmt+sfh+yg+ +ffPg+G ++++g + gk+y+vnvPl+ g++D+ y+++f +++ k +e+f+Pea+vlqcGaDsl+gDrlg +
BGIOSGA034344-PA 205 DSNRVMTLSFHRYGKitphkNFFPGSGAVNEIGDGAGKHYSVNVPLDAGVRDDVYHTLFMPIVGKAMEVFQPEAIVLQCGADSLSGDRLGGME 297
*************85444448************************************************************************ PP
class-1.txt 269 lsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
ls++ghaecv f++ fnlpll++GGGGYt++ va +w+yetav++
BGIOSGA034344-PA 298 LSVRGHAECVGFLRGFNLPLLLVGGGGYTINHVASAWCYETAVAV 342
******************************************986 PP
|
Protein Sequence
(Fasta) | MATGGNSLPA PSCADDKKRR VCYYYDPGIA HIKFSDDHVM VPARVAMAHS LVGVYGMLGD 60
MRRLRTRPAT EAEIRRFHSP EYVDLLRDLT PESYANDAAL RQKAEGHHGI GGDDDCPAFD 120
RLWKYCRGYA GGSLAAARAL VDGASDIAIN WSGGMHHASA CKATGFCYVN DIVLAINELL 180
GTFSRVIYVD IDAHHGDGVQ DAFLDSNRVM TLSFHRYGKI TPHKNFFPGS GAVNEIGDGA 240
GKHYSVNVPL DAGVRDDVYH TLFMPIVGKA MEVFQPEAIV LQCGADSLSG DRLGGMELSV 300
RGHAECVGFL RGFNLPLLLV GGGGYTINHV ASAWCYETAV AVGKEGELPD DIEIPSHGYE 360
LMYKNQGNKL HYQKSTATAA RKRSSSTEVT KGKVLEHLSQ VKRAPSVQFR ERHGGDNAAG 420
VELYYDRPPS LEDDEPAQRL HRLCFPAVAK RIRLN 455Protein Fasta Sequence
>BGIOSGA034344-PA|Class-I|Oryza indica
MATGGNSLPAPSCADDKKRRVCYYYDPGIAHIKFSDDHVMVPARVAMAHSLVGVYGMLGDMRRLRTRPATEAEIRRFHSPEYVDLLRDLTPESYANDAALRQKAEGHHGIGGDDDCPAFDRLWKYCRGYAGGSLAAARALVDGASDIAINWSGGMHHASACKATGFCYVNDIVLAINELLGTFSRVIYVDIDAHHGDGVQDAFLDSNRVMTLSFHRYGKITPHKNFFPGSGAVNEIGDGAGKHYSVNVPLDAGVRDDVYHTLFMPIVGKAMEVFQPEAIVLQCGADSLSGDRLGGMELSVRGHAECVGFLRGFNLPLLLVGGGGYTINHVASAWCYETAVAVGKEGELPDDIEIPSHGYELMYKNQGNKLHYQKSTATAARKRSSSTEVTKGKVLEHLSQVKRAPSVQFRERHGGDNAAGVELYYDRPPSLEDDEPAQRLHRLCFPAVAKRIRLN |
Nucleotide Sequence
(Fasta) | ATGGCCACCG GCGGGAACTC GCTGCCGGCG CCGTCGTGCG CCGACGACAA GAAGCGGCGG 60
GTGTGCTACT ACTACGACCC GGGCATCGCC CACATCAAAT TCAGCGACGA CCATGTCATG 120
GTGCCCGCCC GCGTCGCCAT GGCGCACAGC CTCGTCGGCG TCTACGGCAT GCTCGGCGAC 180
ATGCGCCGCC TCCGCACGAG ACCCGCCACG GAGGCGGAGA TCCGCCGCTT CCACTCGCCG 240
GAGTACGTCG ACCTCCTCCG CGACCTCACC CCGGAGAGCT ACGCCAACGA CGCCGCGCTT 300
CGGCAGAAGG CGGAGGGTCA CCACGGCATC GGCGGCGACG ACGATTGCCC CGCCTTCGAC 360
CGCCTCTGGA AGTACTGCCG CGGCTACGCC GGCGGGTCGC TCGCCGCGGC GCGCGCGCTC 420
GTCGACGGCG CCTCCGACAT CGCCATCAAC TGGTCCGGCG GCATGCACCA CGCCTCCGCC 480
TGCAAGGCCA CCGGCTTCTG CTACGTCAAC GACATCGTGC TCGCCATCAA CGAGCTCCTC 540
GGCACCTTCA GCCGGGTCAT CTATGTCGAC ATCGACGCGC ACCACGGCGA CGGCGTGCAG 600
GATGCCTTCT TGGACTCCAA CCGGGTCATG ACGCTGTCGT TCCACCGGTA CGGCAAAATC 660
ACGCCCCACA AGAACTTCTT CCCGGGCTCC GGCGCCGTCA ACGAAATCGG CGACGGCGCC 720
GGCAAGCACT ACAGCGTGAA CGTGCCGCTG GACGCCGGCG TCCGCGACGA CGTGTACCAC 780
ACGCTGTTCA TGCCGATCGT GGGCAAGGCC ATGGAGGTGT TCCAGCCGGA GGCCATCGTG 840
CTGCAGTGCG GCGCCGACTC GCTCTCCGGC GACCGCCTCG GCGGCATGGA GCTGTCGGTG 900
CGGGGCCACG CGGAGTGCGT CGGCTTCCTC CGCGGGTTCA ACCTGCCGCT GCTCCTCGTC 960
GGCGGCGGCG GCTACACCAT CAACCACGTC GCCTCCGCGT GGTGCTACGA GACGGCGGTC 1020
GCCGTCGGCA AGGAGGGGGA GCTCCCCGAC GACATAGAGA TACCCAGCCA CGGCTACGAG 1080
CTCATGTACA AGAACCAGGG GAACAAGCTC CATTACCAGA AGTCGACAGC GACGGCGGCG 1140
AGAAAGAGGT CGAGCAGCAC GGAGGTCACC AAGGGGAAGG TGCTCGAGCA CCTGTCGCAG 1200
GTCAAGCGCG CGCCGAGCGT GCAGTTCCGG GAGCGACACG GCGGCGACAA TGCCGCCGGA 1260
GTTGAGCTCT ACTACGACCG CCCTCCGAGC CTGGAAGACG ACGAACCCGC GCAGAGGCTG 1320
CACCGCCTCT GCTTCCCCGC CGTGGCGAAG CGTATCAGGC TCAACTGA
1369Nucleotide Fasta Sequence
>BGIOSGA034344-PA|Class-I|Oryza indica
ATGGCCACCGGCGGGAACTCGCTGCCGGCGCCGTCGTGCGCCGACGACAAGAAGCGGCGGGTGTGCTACTACTACGACCCGGGCATCGCCCACATCAAATTCAGCGACGACCATGTCATGGTGCCCGCCCGCGTCGCCATGGCGCACAGCCTCGTCGGCGTCTACGGCATGCTCGGCGACATGCGCCGCCTCCGCACGAGACCCGCCACGGAGGCGGAGATCCGCCGCTTCCACTCGCCGGAGTACGTCGACCTCCTCCGCGACCTCACCCCGGAGAGCTACGCCAACGACGCCGCGCTTCGGCAGAAGGCGGAGGGTCACCACGGCATCGGCGGCGACGACGATTGCCCCGCCTTCGACCGCCTCTGGAAGTACTGCCGCGGCTACGCCGGCGGGTCGCTCGCCGCGGCGCGCGCGCTCGTCGACGGCGCCTCCGACATCGCCATCAACTGGTCCGGCGGCATGCACCACGCCTCCGCCTGCAAGGCCACCGGCTTCTGCTACGTCAACGACATCGTGCTCGCCATCAACGAGCTCCTCGGCACCTTCAGCCGGGTCATCTATGTCGACATCGACGCGCACCACGGCGACGGCGTGCAGGATGCCTTCTTGGACTCCAACCGGGTCATGACGCTGTCGTTCCACCGGTACGGCAAAATCACGCCCCACAAGAACTTCTTCCCGGGCTCCGGCGCCGTCAACGAAATCGGCGACGGCGCCGGCAAGCACTACAGCGTGAACGTGCCGCTGGACGCCGGCGTCCGCGACGACGTGTACCACACGCTGTTCATGCCGATCGTGGGCAAGGCCATGGAGGTGTTCCAGCCGGAGGCCATCGTGCTGCAGTGCGGCGCCGACTCGCTCTCCGGCGACCGCCTCGGCGGCATGGAGCTGTCGGTGCGGGGCCACGCGGAGTGCGTCGGCTTCCTCCGCGGGTTCAACCTGCCGCTGCTCCTCGTCGGCGGCGGCGGCTACACCATCAACCACGTCGCCTCCGCGTGGTGCTACGAGACGGCGGTCGCCGTCGGCAAGGAGGGGGAGCTCCCCGACGACATAGAGATACCCAGCCACGGCTACGAGCTCATGTACAAGAACCAGGGGAACAAGCTCCATTACCAGAAGTCGACAGCGACGGCGGCGAGAAAGAGGTCGAGCAGCACGGAGGTCACCAAGGGGAAGGTGCTCGAGCACCTGTCGCAGGTCAAGCGCGCGCCGAGCGTGCAGTTCCGGGAGCGACACGGCGGCGACAATGCCGCCGGAGTTGAGCTCTACTACGACCGCCCTCCGAGCCTGGAAGACGACGAACCCGCGCAGAGGCTGCACCGCCTCTGCTTCCCCGCCGTGGCGAAGCGTATCAGGCTCAACTGA
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
