| Tag |
Content |
| WERAM ID |
WERAM-Bro-0150 |
| Ensembl Protein ID |
Bo8g076780.1 |
| Gene Name |
|
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
1.40e-117 |
394.3 |
17 |
324 |
|
| Organism |
Brassica oleracea |
| Domain Profile |
HDAC Class-I
class-1.txt 2 kvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenae..els.kelkkfnvge.dcPv 94
+v+y+y++ + g+++ +++s th+L+++y l + ++i++p a++++++kfhs eyi+fl+ v+pe a+ +++ +lk+fn++ d+Pv
Bo8g076780.1 17 RVSYYYEPAI-----GNGNGRESQQISTTHNLICSYYLPRYMDIIRPPPAQHSDFTKFHSPEYISFLRLVTPEYARlkTVTdPSLKRFNLDAwDSPV 108
6788888874.....67889999*************************************************998754555359*******88**** PP
class-1.txt 95 fdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvmtvsfh 191
f+glf+yc+l++Gas++aa+kLn++eadiainw+GG+h ak ++a Gf yvnD+vl+ilellk +krvlyidi hG+ v+eaf++tdrvmtvsfh
Bo8g076780.1 109 FSGLFDYCRLYAGASISAAAKLNRNEADIAINWSGGMHRAKTDKACGFGYVNDVVLGILELLKVFKRVLYIDIGYYHGEAVQEAFHKTDRVMTVSFH 205
************************************************************************************************* PP
class-1.txt 192 kygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksfnlpl 288
k g Gd++d+g++kg yy++n Plk+g+dD s+ ++f ++i+k +e+++Pea+vl cG Dsl+gD lg+fnl++kgh+ c+ +++sfn+pl
Bo8g076780.1 206 KSGV--DQRRGDITDYGVGKGEYYSLNAPLKNGLDDASFATLFVPIIHKAMEVYQPEAIVLLCGPDSLSGDALGKFNLTVKGHGACLGYIRSFNVPL 300
*998..5789*************************************************************************************** PP
class-1.txt 289 lvlGGGGYtlrnvaRcwtyetavv 312
++lGG G+tl nvaRcw+yetav
Bo8g076780.1 301 MLLGGQGHTLGNVARCWCYETAVS 324
*********************996 PP
|
Protein Sequence
(Fasta) | MENAANLAWV PDGRKRRVSY YYEPAIGNGN GRESQQISTT HNLICSYYLP RYMDIIRPPP 60
AQHSDFTKFH SPEYISFLRL VTPEYARLKT VTDPSLKRFN LDAWDSPVFS GLFDYCRLYA 120
GASISAAAKL NRNEADIAIN WSGGMHRAKT DKACGFGYVN DVVLGILELL KVFKRVLYID 180
IGYYHGEAVQ EAFHKTDRVM TVSFHKSGVD QRRGDITDYG VGKGEYYSLN APLKNGLDDA 240
SFATLFVPII HKAMEVYQPE AIVLLCGPDS LSGDALGKFN LTVKGHGACL GYIRSFNVPL 300
MLLGGQGHTL GNVARCWCYE TAVSVGKELN DDCPMIADDD CFAPAYKLHI EPNPMENLNT 360
DGDIAKIKKT LLKQLSQVIH APSVQFQDTP PISQVTEEAE EDMETR 406Protein Fasta Sequence
>Bo8g076780.1|Class-I|Brassica oleracea
MENAANLAWVPDGRKRRVSYYYEPAIGNGNGRESQQISTTHNLICSYYLPRYMDIIRPPPAQHSDFTKFHSPEYISFLRLVTPEYARLKTVTDPSLKRFNLDAWDSPVFSGLFDYCRLYAGASISAAAKLNRNEADIAINWSGGMHRAKTDKACGFGYVNDVVLGILELLKVFKRVLYIDIGYYHGEAVQEAFHKTDRVMTVSFHKSGVDQRRGDITDYGVGKGEYYSLNAPLKNGLDDASFATLFVPIIHKAMEVYQPEAIVLLCGPDSLSGDALGKFNLTVKGHGACLGYIRSFNVPLMLLGGQGHTLGNVARCWCYETAVSVGKELNDDCPMIADDDCFAPAYKLHIEPNPMENLNTDGDIAKIKKTLLKQLSQVIHAPSVQFQDTPPISQVTEEAEEDMETR |
Nucleotide Sequence
(Fasta) | ATGGAGAATG CGGCGAACTT GGCTTGGGTT CCCGACGGAA GGAAACGGCG CGTGAGCTAC 60
TACTACGAGC CAGCGATCGG CAACGGAAAC GGACGAGAAT CCCAACAGAT CAGTACGACT 120
CACAACCTCA TCTGCAGCTA TTACCTCCCT CGCTACATGG ATATCATCCG CCCTCCCCCT 180
GCCCAACATT CAGATTTCAC TAAATTCCAC TCGCCGGAGT ACATATCATT CCTCCGCTTA 240
GTCACGCCGG AGTACGCTAG GTTGAAAACC GTGACGGATC CTTCCCTCAA GCGCTTCAAC 300
TTAGACGCGT GGGACTCCCC TGTCTTCAGT GGCCTCTTCG ATTATTGCCG TCTCTACGCC 360
GGTGCTTCTA TTTCCGCCGC CGCCAAACTG AACCGAAACG AAGCTGATAT CGCCATCAAT 420
TGGTCCGGCG GGATGCACCG TGCCAAGACA GATAAGGCTT GTGGCTTTGG CTACGTCAAC 480
GACGTTGTTC TTGGGATCCT CGAGTTGCTT AAGGTCTTCA AGCGAGTACT CTACATAGAT 540
ATTGGCTACT ACCATGGGGA AGCAGTACAA GAAGCATTCC ACAAAACTGA TAGAGTTATG 600
ACTGTTTCTT TCCACAAGTC TGGGGTCGAC CAAAGAAGAG GGGACATAAC AGACTACGGG 660
GTAGGAAAGG GAGAATACTA TTCTCTAAAT GCACCACTGA AGAATGGTCT GGACGATGCA 720
AGTTTCGCCA CTTTATTTGT ACCTATTATC CATAAGGCTA TGGAGGTTTA TCAACCAGAA 780
GCAATTGTTC TTCTGTGCGG CCCTGATTCA TTATCTGGTG ATGCGTTGGG TAAATTCAAC 840
TTGACTGTCA AGGGTCATGG TGCTTGTCTC GGGTACATAA GATCATTTAA TGTTCCTCTC 900
ATGCTCTTGG GTGGTCAAGG TCACACTCTT GGAAATGTTG CACGTTGCTG GTGCTATGAG 960
ACAGCAGTTT CGGTTGGAAA AGAACTCAAC GACGATTGCC CTATGATTGC GGACGACGAT 1020
TGTTTTGCCC CAGCTTATAA ACTTCACATC GAGCCAAACC CCATGGAGAA TTTAAACACA 1080
GACGGAGATA TTGCAAAAAT AAAGAAGACA CTACTAAAGC AACTTTCGCA AGTGATACAC 1140
GCACCTAGTG TGCAGTTTCA AGACACTCCA CCAATCAGTC AAGTTACAGA AGAAGCGGAA 1200
GAGGACATGG AGACGAGATA A
1222Nucleotide Fasta Sequence
>Bo8g076780.1|Class-I|Brassica oleracea
ATGGAGAATGCGGCGAACTTGGCTTGGGTTCCCGACGGAAGGAAACGGCGCGTGAGCTACTACTACGAGCCAGCGATCGGCAACGGAAACGGACGAGAATCCCAACAGATCAGTACGACTCACAACCTCATCTGCAGCTATTACCTCCCTCGCTACATGGATATCATCCGCCCTCCCCCTGCCCAACATTCAGATTTCACTAAATTCCACTCGCCGGAGTACATATCATTCCTCCGCTTAGTCACGCCGGAGTACGCTAGGTTGAAAACCGTGACGGATCCTTCCCTCAAGCGCTTCAACTTAGACGCGTGGGACTCCCCTGTCTTCAGTGGCCTCTTCGATTATTGCCGTCTCTACGCCGGTGCTTCTATTTCCGCCGCCGCCAAACTGAACCGAAACGAAGCTGATATCGCCATCAATTGGTCCGGCGGGATGCACCGTGCCAAGACAGATAAGGCTTGTGGCTTTGGCTACGTCAACGACGTTGTTCTTGGGATCCTCGAGTTGCTTAAGGTCTTCAAGCGAGTACTCTACATAGATATTGGCTACTACCATGGGGAAGCAGTACAAGAAGCATTCCACAAAACTGATAGAGTTATGACTGTTTCTTTCCACAAGTCTGGGGTCGACCAAAGAAGAGGGGACATAACAGACTACGGGGTAGGAAAGGGAGAATACTATTCTCTAAATGCACCACTGAAGAATGGTCTGGACGATGCAAGTTTCGCCACTTTATTTGTACCTATTATCCATAAGGCTATGGAGGTTTATCAACCAGAAGCAATTGTTCTTCTGTGCGGCCCTGATTCATTATCTGGTGATGCGTTGGGTAAATTCAACTTGACTGTCAAGGGTCATGGTGCTTGTCTCGGGTACATAAGATCATTTAATGTTCCTCTCATGCTCTTGGGTGGTCAAGGTCACACTCTTGGAAATGTTGCACGTTGCTGGTGCTATGAGACAGCAGTTTCGGTTGGAAAAGAACTCAACGACGATTGCCCTATGATTGCGGACGACGATTGTTTTGCCCCAGCTTATAAACTTCACATCGAGCCAAACCCCATGGAGAATTTAAACACAGACGGAGATATTGCAAAAATAAAGAAGACACTACTAAAGCAACTTTCGCAAGTGATACACGCACCTAGTGTGCAGTTTCAAGACACTCCACCAATCAGTCAAGTTACAGAAGAAGCGGAAGAGGACATGGAGACGAGATAA
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
