WERAM Information


Tag Content
WERAM ID WERAM-Brr-0099
Ensembl Protein ID Bra019516.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra019516 Bra019516.1 Bra019516.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 2.60e-117 392.9 18 320
Organism Brassica rapa
Domain Profile
  HDAC Class-I

    class-1.txt   6 aydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenae...elskelkkfnvge.dcPvfdg 97 
+y++ + m ++++ th+L+ +y l + ++i++p+ a++++++kfhs eyi+fl++v+pe+a+ + ++k+fn++ d+Pvf+g
Bra019516.1-P 18 YYEP-------YIGDGMESQQIRTTHKLIRSYYLPRYMDIIRPRAAHHSDFTKFHSPEYISFLRSVTPESARlktATDPSFKRFNLDAwDSPVFSG 106
3333.......34578999**************************************************998643333699******88******* PP
class-1.txt 98 lfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvmtvsfhky 193
lf yc+l++G+s++aa+kLn++eadiainw+GG+h ak ++a Gf yvnD+vl+ilellk +krvlyidi hG+ v+eaf++tdrvmtvsfhk
Bra019516.1-P 107 LFPYCRLYAGGSISAAEKLNRHEADIAINWSGGMHRAKIDKACGFGYVNDVVLGILELLKVFKRVLYIDIGYYHGEAVQEAFHKTDRVMTVSFHKS 202
***********************************************************************************************9 PP
class-1.txt 194 geeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksfnlpll 289
g Gd++d+g++kg yy++n Plk+g+dD s+ ++f ++i+k +e+++Pea+vl cG Dsl+gD lg+fnls+kgh+ c+ +++sfn+pll
Bra019516.1-P 203 GV--DQRRGDITDYGVGKGEYYSLNAPLKNGLDDASFATLFVPIIQKAMEVYQPEAIVLLCGPDSLSGDALGKFNLSVKGHGACLGYIRSFNVPLL 296
98..5789**************************************************************************************** PP
class-1.txt 290 vlGGGGYtlrnvaRcwtyetavvl 313
+lGG G+tl nvaRcw+yet+v++
Bra019516.1-P 297 LLGGQGHTLGNVARCWCYETGVAV 320
*********************986 PP

Protein Sequence
(Fasta)
MASLASGPDG RKRRVSYYYE PYIGDGMESQ QIRTTHKLIR SYYLPRYMDI IRPRAAHHSD 60
FTKFHSPEYI SFLRSVTPES ARLKTATDPS FKRFNLDAWD SPVFSGLFPY CRLYAGGSIS 120
AAEKLNRHEA DIAINWSGGM HRAKIDKACG FGYVNDVVLG ILELLKVFKR VLYIDIGYYH 180
GEAVQEAFHK TDRVMTVSFH KSGVDQRRGD ITDYGVGKGE YYSLNAPLKN GLDDASFATL 240
FVPIIQKAME VYQPEAIVLL CGPDSLSGDA LGKFNLSVKG HGACLGYIRS FNVPLLLLGG 300
QGHTLGNVAR CWCYETGVAV GKELNDDCPM IADDDCFAPS YKLHIEPNPM ENLNTDGDIA 360
KIKKTLLKQL SQVIHAPSVQ FQDTPPISQV TEAEEEDMET R 401
Nucleotide Sequence
(Fasta)
ATGGCGAGCT TGGCTTCGGG TCCCGACGGA AGGAAACGGC GCGTGAGCTA CTACTACGAG 60
CCATACATCG GCGACGGTAT GGAATCCCAA CAGATCCGTA CGACTCACAA GCTCATCCGC 120
AGCTATTACC TCCCTCGCTA CATGGATATC ATCCGCCCTC GCGCTGCCCA CCATTCAGAT 180
TTCACTAAAT TCCACTCGCC GGAGTACATA TCATTCCTCC GCTCAGTCAC GCCGGAGTCG 240
GCTAGGTTGA AAACCGCGAC GGATCCTTCC TTCAAGCGCT TCAACTTAGA CGCGTGGGAC 300
TCCCCTGTCT TCAGTGGCCT CTTCCCATAT TGCCGTCTCT ACGCCGGTGG TTCTATTTCC 360
GCCGCCGAGA AACTGAACCG ACACGAAGCT GATATCGCCA TCAATTGGTC CGGCGGGATG 420
CACCGTGCCA AGATAGATAA GGCTTGTGGC TTTGGCTACG TCAACGACGT TGTTCTTGGG 480
ATCCTCGAGT TGCTTAAGGT CTTCAAGCGA GTACTCTACA TAGATATTGG CTACTACCAT 540
GGGGAAGCAG TACAAGAAGC ATTCCACAAA ACTGATAGAG TTATGACTGT TTCTTTCCAC 600
AAGTCTGGGG TCGACCAAAG AAGAGGAGAC ATAACAGACT ACGGGGTAGG AAAGGGAGAA 660
TACTATTCTC TAAATGCACC ACTGAAGAAT GGTCTGGACG ATGCAAGTTT CGCCACTTTA 720
TTTGTACCTA TCATCCAAAA GGCTATGGAG GTTTATCAAC CAGAAGCAAT TGTTCTTCTG 780
TGCGGCCCTG ATTCATTATC TGGTGATGCG TTGGGTAAAT TCAACTTGTC TGTCAAGGGT 840
CATGGTGCTT GTCTCGGGTA CATAAGATCA TTTAATGTTC CTCTCCTGCT CTTGGGTGGT 900
CAAGGTCACA CTCTTGGAAA TGTTGCACGT TGCTGGTGCT ATGAGACAGG TGTTGCGGTT 960
GGAAAAGAAC TCAACGACGA TTGCCCTATG ATTGCGGACG ACGATTGTTT TGCCCCAAGT 1020
TATAAACTTC ATATCGAGCC AAACCCCATG GAGAATTTAA ACACAGACGG AGATATTGCA 1080
AAAATAAAGA AGACACTACT AAAGCAACTT TCGCAAGTGA TACACGCACC TAGTGTGCAG 1140
TTTCAAGACA CTCCACCAAT CAGTCAAGTT ACAGAAGCGG AGGAAGAGGA CATGGAGACG 1200
AGATAA 1207
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0150 Bo8g076780.1 Brassica oleracea 92 0.0 739
WERAM-Art-0132 AT5G35600.1 Arabidopsis thaliana 64 5e-140 494
WERAM-Arl-0113 fgenesh2_kg.8__ 2309__ AT5G63110.1 Arabidopsis lyrata 61 2e-132 469
WERAM-Sol-0082 Solyc06g071680.2.1 Solanum lycopersicum 58 9e-125 444
WERAM-Thc-0029 EOY20838 Theobroma cacao 58 4e-124 442
WERAM-Viv-0108 VIT_17s0000g09070.t01 Vitis vinifera 58 3e-123 439
WERAM-Glm-0046 GLYMA05G02540.1 Glycine max 57 1e-121 434
WERAM-Met-0068 AES71453 Medicago truncatula 57 3e-121 432
WERAM-Pot-0149 POPTR_0015s09400.1 Populus trichocarpa 56 7e-120 427
WERAM-Prp-0060 EMJ10303 Prunus persica 57 2e-118 423
WERAM-Sot-0054 PGSC0003DMT400046818 Solanum tuberosum 55 8e-117 417
WERAM-Php-0050 PP1S223_52V6.1 Physcomitrella patens 54 1e-116 417
WERAM-Amt-0072 ERN20455 Amborella trichopoda 55 2e-116 416
WERAM-Orr-0094 ORUFI08G12880.1 Oryza rufipogon 53 2e-115 413
WERAM-Brd-0068 BRADI3G08060.1 Brachypodium distachyon 54 2e-115 412
WERAM-Ors-0081 OS08T0344100-01 Oryza sativa 53 3e-115 412
WERAM-Orp-0087 OPUNC08G10650.1 Oryza punctata 53 3e-115 412
WERAM-Orm-0085 OMERI08G09730.1 Oryza meridionalis 53 3e-115 412
WERAM-Ori-0098 BGIOSGA028498-PA Oryza indica 53 3e-115 412
WERAM-Orgl-0088 OGLUM08G12440.1 Oryza glumaepatula 53 3e-115 412
WERAM-Org-0090 ORGLA08G0103000.1 Oryza glaberrima 53 3e-115 412
WERAM-Sei-0069 Si016908m Setaria italica 54 5e-114 408
WERAM-Orbr-0098 OB08G20020.1 Oryza brachyantha 52 3e-113 405
WERAM-Tra-0274 Traes_6DS_08E9A4EDB.1 Triticum aestivum 52 1e-112 404
WERAM-Aet-0051 EMT16627 Aegilops tauschii 55 1e-112 404
WERAM-Hov-0020 MLOC_17056.1 Hordeum vulgare 53 3e-112 402
WERAM-Zem-0077 GRMZM2G136067_P01 Zea mays 52 3e-112 402
WERAM-Sob-0102 Sb07g018230.1 Sorghum bicolor 52 5e-112 401
WERAM-Sem-0132 EFJ35052 Selaginella moellendorffii 53 5e-111 398
WERAM-Orb-0066 OBART06G19560.1 Oryza barthii 53 8e-111 397
WERAM-Lep-0023 LPERR02G07360.1 Leersia perrieri 52 6e-109 391
WERAM-Orni-0020 ONIVA02G09910.1 Oryza nivara 51 4e-107 385
WERAM-Cii-0014 ENSCINP00000005410.3 Ciona intestinalis 50 6e-105 378
WERAM-Gaga-0034 ENSGALP00000005212.3 Gallus gallus 51 2e-104 376
WERAM-Tag-0022 ENSTGUP00000001473.1 Taeniopygia guttata 51 2e-104 376
WERAM-Loa-0056 ENSLAFP00000004079.2 Loxodonta africana 51 4e-104 375
WERAM-Ova-0221 ENSOARP00000022517.1 Ovis aries 50 9e-104 374
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 50 9e-104 374
WERAM-Ran-0062 ENSRNOP00000012854.5 Rattus norvegicus 50 9e-104 374
WERAM-Gaa-0093 ENSGACP00000012045.1 Gasterosteus aculeatus 51 9e-104 374
WERAM-Mum-0093 ENSMUSP00000099657.4 Mus musculus 50 1e-103 374
WERAM-Ptv-0152 ENSPVAP00000012567.1 Pteropus vampyrus 50 1e-103 374
WERAM-Ocp-0006 ENSOPRP00000000780.1 Ochotona princeps 50 1e-103 374
WERAM-Mup-0173 ENSMPUP00000015122.1 Mustela putorius furo 50 1e-103 374
WERAM-Nol-0026 ENSNLEP00000003167.1 Nomascus leucogenys 50 2e-103 373
WERAM-Orla-0197 ENSORLP00000022529.1 Oryzias latipes 50 2e-103 373
WERAM-Hos-0092 ENSP00000362649.3 Homo sapiens 50 2e-103 373
WERAM-Gog-0132 ENSGGOP00000011454.2 Gorilla gorilla 50 2e-103 373
WERAM-Cap-0092 ENSCPOP00000006985.2 Cavia porcellus 50 2e-103 373
WERAM-Drm-0018 FBpp0073173 Drosophila melanogaster 50 2e-103 373
WERAM-Orc-0030 ENSOCUP00000003186.2 Oryctolagus cuniculus 50 2e-103 373
WERAM-Otg-0072 ENSOGAP00000005101.2 Otolemur garnettii 50 2e-103 373
WERAM-Tar-0085 ENSTRUP00000016627.1 Takifugu rubripes 50 3e-103 372
WERAM-Asm-0120 ENSAMXP00000012237.1 Astyanax mexicanus 49 3e-103 372
WERAM-Dar-0035 ENSDARP00000051798.4 Danio rerio 49 5e-103 372
WERAM-Xim-0229 ENSXMAP00000019038.1 Xiphophorus maculatus 50 5e-103 371
WERAM-Pof-0034 ENSPFOP00000002952.2 Poecilia formosa 50 5e-103 371
WERAM-Ten-0109 ENSTNIP00000012136.1 Tetraodon nigroviridis 50 6e-103 371
WERAM-Orn-0087 ENSONIP00000009730.1 Oreochromis niloticus 50 6e-103 371
WERAM-Leo-0014 ENSLOCP00000002993.1 Lepisosteus oculatus 51 1e-102 370
WERAM-Anc-0129 ENSACAP00000012046.2 Anolis carolinensis 49 1e-102 370
WERAM-Gam-0033 ENSGMOP00000003469.1 Gadus morhua 50 2e-102 370
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 49 2e-102 370
WERAM-Mod-0165 ENSMODP00000022264.3 Monodelphis domestica 49 2e-102 369
WERAM-Paa-0030 ENSPANP00000015145.1 Papio anubis 49 2e-102 369
WERAM-Chs-0191 ENSCSAP00000011772.1 Chlorocebus sabaeus 49 2e-102 369
WERAM-Fia-0139 ENSFALP00000011453.1 Ficedula albicollis 49 2e-102 369
WERAM-Ict-0111 ENSSTOP00000011457.2 Ictidomys tridecemlineatus 49 2e-102 369
WERAM-Xet-0037 ENSXETP00000011480.3 Xenopus tropicalis 50 3e-102 369
WERAM-Myl-0035 ENSMLUP00000002835.2 Myotis lucifugus 49 3e-102 369
WERAM-Sus-0028 ENSSSCP00000004781.2 Sus scrofa 49 3e-102 369
WERAM-Meg-0047 ENSMGAP00000004521.2 Meleagris gallopavo 51 7e-102 368
WERAM-Caf-0116 ENSCAFP00000015619.3 Canis familiaris 50 7e-102 368
WERAM-Poa-0013 ENSPPYP00000001838.2 Pongo abelii 49 8e-102 367
WERAM-Pat-0155 ENSPTRP00000049696.3 Pan troglodytes 49 9e-102 367
WERAM-Anp-0136 ENSAPLP00000014652.1 Anas platyrhynchos 51 1e-101 367
WERAM-Dan-0175 ENSDNOP00000033349.1 Dasypus novemcinctus 50 1e-101 367
WERAM-Aim-0151 ENSAMEP00000013919.1 Ailuropoda melanoleuca 49 2e-101 366
WERAM-Eqc-0125 ENSECAP00000014039.1 Equus caballus 51 2e-101 366
WERAM-Mua-0044 GSMUA_Achr2P06520_001 Musa acuminata 55 2e-101 366
WERAM-Pes-0020 ENSPSIP00000004435.1 Pelodiscus sinensis 49 8e-101 364
WERAM-Fec-0127 ENSFCAP00000011581.3 Felis catus 51 1e-100 363
WERAM-Tut-0167 ENSTTRP00000014262.1 Tursiops truncatus 49 1e-100 363
WERAM-Ere-0068 ENSEEUP00000005465.1 Erinaceus europaeus 50 3e-100 362
WERAM-Sah-0134 ENSSHAP00000014467.1 Sarcophilus harrisii 50 4e-100 362
WERAM-Caj-0052 ENSCJAP00000008409.2 Callithrix jacchus 51 7e-100 361
WERAM-Ora-0034 ENSOANP00000005760.2 Ornithorhynchus anatinus 51 1e-99 360
WERAM-Cae-0005 C53A5.3 Caenorhabditis elegans 48 6e-99 358
WERAM-Asn-0024 CADANIAP00005952 Aspergillus nidulans 46 2e-98 356
WERAM-Osl-0002 ABO94711 Ostreococcus lucimarinus 48 3e-98 355
WERAM-Scs-0023 EDO03342 Sclerotinia sclerotiorum 47 9e-98 354
WERAM-Tas-0085 ENSTSYP00000008588.1 Tarsius syrichta 49 3e-97 352
WERAM-Ved-0020 EGY15146 Verticillium dahliae 46 8e-97 351
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 47 9e-97 351
WERAM-Asni-0020 CADANGAP00005938 Aspergillus niger 46 2e-96 350
WERAM-Coi-0024 EAS33504 Coccidioides immitis 47 4e-96 348
WERAM-Asfu-0015 CADAFUAP00003503 Aspergillus fumigatus 46 4e-96 348
WERAM-Asc-0037 CADACLAP00008612 Aspergillus clavatus 46 5e-96 348
WERAM-Spr-0005 CBQ70764 Sporisorium reilianum 47 3e-95 346
WERAM-Mam-0073 ENSMMUP00000011716.2 Macaca mulatta 47 6e-95 345
WERAM-Vip-0012 ENSVPAP00000001394.1 Vicugna pacos 52 8e-94 341
WERAM-Trr-0017 EGR48353 Trichoderma reesei 45 1e-93 340
Created Date 25-Jun-2016