Tag |
Content |
WERAM ID |
WERAM-Brr-0099 |
Ensembl Protein ID |
Bra019516.1-P |
Gene Name |
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Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-I |
2.60e-117 |
392.9 |
18 |
320 |
|
Organism |
Brassica rapa |
Domain Profile |
HDAC Class-I
class-1.txt 6 aydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenae...elskelkkfnvge.dcPvfdg 97 +y++ + m ++++ th+L+ +y l + ++i++p+ a++++++kfhs eyi+fl++v+pe+a+ + ++k+fn++ d+Pvf+g Bra019516.1-P 18 YYEP-------YIGDGMESQQIRTTHKLIRSYYLPRYMDIIRPRAAHHSDFTKFHSPEYISFLRSVTPESARlktATDPSFKRFNLDAwDSPVFSG 106 3333.......34578999**************************************************998643333699******88******* PP class-1.txt 98 lfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvmtvsfhky 193 lf yc+l++G+s++aa+kLn++eadiainw+GG+h ak ++a Gf yvnD+vl+ilellk +krvlyidi hG+ v+eaf++tdrvmtvsfhk Bra019516.1-P 107 LFPYCRLYAGGSISAAEKLNRHEADIAINWSGGMHRAKIDKACGFGYVNDVVLGILELLKVFKRVLYIDIGYYHGEAVQEAFHKTDRVMTVSFHKS 202 ***********************************************************************************************9 PP class-1.txt 194 geeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksfnlpll 289 g Gd++d+g++kg yy++n Plk+g+dD s+ ++f ++i+k +e+++Pea+vl cG Dsl+gD lg+fnls+kgh+ c+ +++sfn+pll Bra019516.1-P 203 GV--DQRRGDITDYGVGKGEYYSLNAPLKNGLDDASFATLFVPIIQKAMEVYQPEAIVLLCGPDSLSGDALGKFNLSVKGHGACLGYIRSFNVPLL 296 98..5789**************************************************************************************** PP class-1.txt 290 vlGGGGYtlrnvaRcwtyetavvl 313 +lGG G+tl nvaRcw+yet+v++ Bra019516.1-P 297 LLGGQGHTLGNVARCWCYETGVAV 320 *********************986 PP
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Protein Sequence (Fasta) | MASLASGPDG RKRRVSYYYE PYIGDGMESQ QIRTTHKLIR SYYLPRYMDI IRPRAAHHSD 60 FTKFHSPEYI SFLRSVTPES ARLKTATDPS FKRFNLDAWD SPVFSGLFPY CRLYAGGSIS 120 AAEKLNRHEA DIAINWSGGM HRAKIDKACG FGYVNDVVLG ILELLKVFKR VLYIDIGYYH 180 GEAVQEAFHK TDRVMTVSFH KSGVDQRRGD ITDYGVGKGE YYSLNAPLKN GLDDASFATL 240 FVPIIQKAME VYQPEAIVLL CGPDSLSGDA LGKFNLSVKG HGACLGYIRS FNVPLLLLGG 300 QGHTLGNVAR CWCYETGVAV GKELNDDCPM IADDDCFAPS YKLHIEPNPM ENLNTDGDIA 360 KIKKTLLKQL SQVIHAPSVQ FQDTPPISQV TEAEEEDMET R 401Protein Fasta Sequence
>Bra019516.1-P|Class-I|Brassica rapa MASLASGPDGRKRRVSYYYEPYIGDGMESQQIRTTHKLIRSYYLPRYMDIIRPRAAHHSDFTKFHSPEYISFLRSVTPESARLKTATDPSFKRFNLDAWDSPVFSGLFPYCRLYAGGSISAAEKLNRHEADIAINWSGGMHRAKIDKACGFGYVNDVVLGILELLKVFKRVLYIDIGYYHGEAVQEAFHKTDRVMTVSFHKSGVDQRRGDITDYGVGKGEYYSLNAPLKNGLDDASFATLFVPIIQKAMEVYQPEAIVLLCGPDSLSGDALGKFNLSVKGHGACLGYIRSFNVPLLLLGGQGHTLGNVARCWCYETGVAVGKELNDDCPMIADDDCFAPSYKLHIEPNPMENLNTDGDIAKIKKTLLKQLSQVIHAPSVQFQDTPPISQVTEAEEEDMETR
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Nucleotide Sequence (Fasta) | ATGGCGAGCT TGGCTTCGGG TCCCGACGGA AGGAAACGGC GCGTGAGCTA CTACTACGAG 60 CCATACATCG GCGACGGTAT GGAATCCCAA CAGATCCGTA CGACTCACAA GCTCATCCGC 120 AGCTATTACC TCCCTCGCTA CATGGATATC ATCCGCCCTC GCGCTGCCCA CCATTCAGAT 180 TTCACTAAAT TCCACTCGCC GGAGTACATA TCATTCCTCC GCTCAGTCAC GCCGGAGTCG 240 GCTAGGTTGA AAACCGCGAC GGATCCTTCC TTCAAGCGCT TCAACTTAGA CGCGTGGGAC 300 TCCCCTGTCT TCAGTGGCCT CTTCCCATAT TGCCGTCTCT ACGCCGGTGG TTCTATTTCC 360 GCCGCCGAGA AACTGAACCG ACACGAAGCT GATATCGCCA TCAATTGGTC CGGCGGGATG 420 CACCGTGCCA AGATAGATAA GGCTTGTGGC TTTGGCTACG TCAACGACGT TGTTCTTGGG 480 ATCCTCGAGT TGCTTAAGGT CTTCAAGCGA GTACTCTACA TAGATATTGG CTACTACCAT 540 GGGGAAGCAG TACAAGAAGC ATTCCACAAA ACTGATAGAG TTATGACTGT TTCTTTCCAC 600 AAGTCTGGGG TCGACCAAAG AAGAGGAGAC ATAACAGACT ACGGGGTAGG AAAGGGAGAA 660 TACTATTCTC TAAATGCACC ACTGAAGAAT GGTCTGGACG ATGCAAGTTT CGCCACTTTA 720 TTTGTACCTA TCATCCAAAA GGCTATGGAG GTTTATCAAC CAGAAGCAAT TGTTCTTCTG 780 TGCGGCCCTG ATTCATTATC TGGTGATGCG TTGGGTAAAT TCAACTTGTC TGTCAAGGGT 840 CATGGTGCTT GTCTCGGGTA CATAAGATCA TTTAATGTTC CTCTCCTGCT CTTGGGTGGT 900 CAAGGTCACA CTCTTGGAAA TGTTGCACGT TGCTGGTGCT ATGAGACAGG TGTTGCGGTT 960 GGAAAAGAAC TCAACGACGA TTGCCCTATG ATTGCGGACG ACGATTGTTT TGCCCCAAGT 1020 TATAAACTTC ATATCGAGCC AAACCCCATG GAGAATTTAA ACACAGACGG AGATATTGCA 1080 AAAATAAAGA AGACACTACT AAAGCAACTT TCGCAAGTGA TACACGCACC TAGTGTGCAG 1140 TTTCAAGACA CTCCACCAAT CAGTCAAGTT ACAGAAGCGG AGGAAGAGGA CATGGAGACG 1200 AGATAA
1207Nucleotide Fasta Sequence
>Bra019516.1-P|Class-I|Brassica rapa ATGGCGAGCTTGGCTTCGGGTCCCGACGGAAGGAAACGGCGCGTGAGCTACTACTACGAGCCATACATCGGCGACGGTATGGAATCCCAACAGATCCGTACGACTCACAAGCTCATCCGCAGCTATTACCTCCCTCGCTACATGGATATCATCCGCCCTCGCGCTGCCCACCATTCAGATTTCACTAAATTCCACTCGCCGGAGTACATATCATTCCTCCGCTCAGTCACGCCGGAGTCGGCTAGGTTGAAAACCGCGACGGATCCTTCCTTCAAGCGCTTCAACTTAGACGCGTGGGACTCCCCTGTCTTCAGTGGCCTCTTCCCATATTGCCGTCTCTACGCCGGTGGTTCTATTTCCGCCGCCGAGAAACTGAACCGACACGAAGCTGATATCGCCATCAATTGGTCCGGCGGGATGCACCGTGCCAAGATAGATAAGGCTTGTGGCTTTGGCTACGTCAACGACGTTGTTCTTGGGATCCTCGAGTTGCTTAAGGTCTTCAAGCGAGTACTCTACATAGATATTGGCTACTACCATGGGGAAGCAGTACAAGAAGCATTCCACAAAACTGATAGAGTTATGACTGTTTCTTTCCACAAGTCTGGGGTCGACCAAAGAAGAGGAGACATAACAGACTACGGGGTAGGAAAGGGAGAATACTATTCTCTAAATGCACCACTGAAGAATGGTCTGGACGATGCAAGTTTCGCCACTTTATTTGTACCTATCATCCAAAAGGCTATGGAGGTTTATCAACCAGAAGCAATTGTTCTTCTGTGCGGCCCTGATTCATTATCTGGTGATGCGTTGGGTAAATTCAACTTGTCTGTCAAGGGTCATGGTGCTTGTCTCGGGTACATAAGATCATTTAATGTTCCTCTCCTGCTCTTGGGTGGTCAAGGTCACACTCTTGGAAATGTTGCACGTTGCTGGTGCTATGAGACAGGTGTTGCGGTTGGAAAAGAACTCAACGACGATTGCCCTATGATTGCGGACGACGATTGTTTTGCCCCAAGTTATAAACTTCATATCGAGCCAAACCCCATGGAGAATTTAAACACAGACGGAGATATTGCAAAAATAAAGAAGACACTACTAAAGCAACTTTCGCAAGTGATACACGCACCTAGTGTGCAGTTTCAAGACACTCCACCAATCAGTCAAGTTACAGAAGCGGAGGAAGAGGACATGGAGACGAGATAA
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Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |