WERAM Information

Tag Content
WERAM ID WERAM-Viv-0021
Ensembl Protein ID VIT_04s0044g01510.t01
Gene Name VIT_04s0044g01510
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
VIT_04s0044g01510 VIT_04s0044g01510.t01 VIT_04s0044g01510.t01
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 1.40e-92 310.9 87 402
HDAC Class-I 5.80e-28 98.9 116 370
Organism Vitis vinifera
Domain Profile
  HDAC Class-II
            class-2.txt  16 leenkekhpEkpeRiqailsrlqeaglle.....kleelka.rkatkeelqlvHseehvelletaeklekeelesltvdsdsiylesk 97 
                            + +n+e+hpE+  R+ ai+s+l++ +l +     +++el++ + a+ e++++vH++++v+ le+++ + +++       s+ +y++ +
  VIT_04s0044g01510.t01  87 MGHNQESHPESNFRVPAIVSALEKMELSPmfrgsEILELHSfSPASVEDIASVHTKAYVSGLEKSMDQASQKGIIYIDGSGPTYATAT 174
                            5688999********************99777777899988899*********************96666666668999********* PP
            class-2.txt  98 sikaarlavGavlelvdkvlkgelkn.....gfavvRPPGHHaeestamGFClfnnvavaakllqqklkvkkilivDwDvHhGnGtqe 180
                            +++ + la+Ga ++lvd+v++++ +      gfa++RPPGHHa ++ +mGFC+f nva+aa+++q+ + +k+++i+D+DvHhGnGt++
  VIT_04s0044g01510.t01 175 TFQESLLAAGAGITLVDSVVAASKSSqdppmGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRVHGLKRVFIIDFDVHHGNGTND 262
                            *******************999875567888********************************************************* PP
            class-2.txt 181 ifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaeg 268
                            +fy+dp++++lS+H  ++gs +p  g+g++devg+g+geg ++N++++gg+ gd  ++++f+ev++p a++FkPd++lvsaG+D +  
  VIT_04s0044g01510.t01 263 AFYDDPDIFFLSTH--QDGS-YP--GTGKIDEVGHGSGEGATLNLPLPGGS-GDIAMRTVFDEVIVPSAQRFKPDIILVSAGYDGHVL 344
                            **************..9***.78..8***********************99.************************************ PP
            class-2.txt 269 dplgglsvtakcyatltkqllkl....aggrvvlvlEGGynlkaiaeaveavvkaLlg 322
                            dpl++l++t+ +y +l+ ++++l    +ggr+v++lEGGynl++++++v+ +++a lg
  VIT_04s0044g01510.t01 345 DPLASLQFTTGTYYMLASNIKQLakdlCGGRCVFFLEGGYNLSSLSYSVADSFRAFLG 402
                            ****************99999888888************************9999875 PP
  HDAC Class-I
            class-1.txt  36 nyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdglfey..cqlitGasleaakkLn...k 118
                             +  s+ le+ + + as+e+++++h+++y++ l+k+  + +++ +       ++   P +     +  + l +Ga ++ ++ +    k
  VIT_04s0044g01510.t01 116 MFRGSEILELHSFSPASVEDIASVHTKAYVSGLEKSMDQASQKGI-----IYIDGSGPTYATATTFqeSLLAAGAGITLVDSVVaasK 198
                            4555667888888999*****************988766655544.....56889999887766661156789999887766541113 PP
            class-1.txt 119 keadiainwa...GGlhhakkseasGfcyvnDivlailellkkh..krvlyididlhhGDgveeafyttdrvmtvsfhkygeeffPgt 201
                            +++d  + +a      hha  +   Gfc   ++ +a    ++ h  krv  id+d+hhG+g ++afy    ++ +s h+ g   +Pgt
  VIT_04s0044g01510.t01 199 SSQDPPMGFAlirPPGHHAIPKGPMGFCVFGNVAIAARYAQRVHglKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGS--YPGT 284
                            4444444443111345********************99988865449*******************************9998..9*** PP
            class-1.txt 202 GdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksfnlp 287
                            G++++vg+++g   ++n+Pl  g  D  ++++f +vi +  ++f+P+++++  G D+   D+l++ ++++ ++    + +k+    
  VIT_04s0044g01510.t01 285 GKIDEVGHGSGEGATLNLPLPGGSGDIAMRTVFDEVIVPSAQRFKPDIILVSAGYDGHVLDPLASLQFTTGTYYMLASNIKQLAKD 370
                            ********************************************************************998877766666666444 PP
Protein Sequence
(Fasta)		MLLLQKTLPS FTGSLVLLVQ HNVCKLKNHG RFGSDTKFSG DGYFRKHLKS GRRYFSKSRG 60
PFVSCSLVPS TSELSDARVI YCVAPAMGHN QESHPESNFR VPAIVSALEK MELSPMFRGS 120
EILELHSFSP ASVEDIASVH TKAYVSGLEK SMDQASQKGI IYIDGSGPTY ATATTFQESL 180
LAAGAGITLV DSVVAASKSS QDPPMGFALI RPPGHHAIPK GPMGFCVFGN VAIAARYAQR 240
VHGLKRVFII DFDVHHGNGT NDAFYDDPDI FFLSTHQDGS YPGTGKIDEV GHGSGEGATL 300
NLPLPGGSGD IAMRTVFDEV IVPSAQRFKP DIILVSAGYD GHVLDPLASL QFTTGTYYML 360
ASNIKQLAKD LCGGRCVFFL EGGYNLSSLS YSVADSFRAF LGEPSLASEF DDPAILYEEP 420
STKVKQAIQK VKHLHSL 437
Nucleotide Sequence
(Fasta)		AAAAAAAATT AAGATGGACA ATGAAAAGGA TATATTCAAA GAAATTAAAA ATCACTATCA 60
TACAATGAAG AGTATAACCA AAATTGGAGT ACTGAGCAAT GCCAAATCTT TGTGTGGCAC 120
ACAATGCTGC TGCTCCAAAA AACTCTTCCG TCCTTCACAG GCAGTTTAGT GTTATTGGTG 180
CAGCATAATG TGTGCAAGTT GAAGAATCAT GGAAGATTTG GTTCAGACAC CAAATTTTCT 240
GGGGATGGAT ATTTCCGGAA GCATTTGAAA TCAGGAAGGA GATACTTCTC CAAAAGCAGA 300
GGGCCTTTTG TTTCTTGTTC CCTTGTACCT TCAACTAGTG AGCTAAGCGA TGCACGGGTG 360
ATTTATTGTG TAGCTCCTGC CATGGGCCAT AACCAGGAGT CACATCCGGA ATCTAATTTT 420
AGGGTTCCTG CAATTGTGAG TGCTCTGGAA AAGATGGAAC TGTCACCAAT GTTCCGTGGC 480
TCAGAGATCC TTGAACTTCA TAGTTTCAGT CCTGCTTCAG TGGAAGATAT AGCAAGTGTT 540
CACACAAAGG CCTATGTATC AGGTCTTGAG AAGAGTATGG ATCAGGCTTC ACAGAAAGGA 600
ATTATTTACA TTGATGGCTC TGGACCAACA TATGCTACTG CAACTACTTT CCAAGAATCA 660
CTACTTGCAG CTGGAGCAGG AATCACCTTA GTTGATTCAG TGGTAGCAGC ATCAAAGAGC 720
AGCCAGGACC CACCAATGGG TTTTGCTTTG ATAAGACCTC CAGGTCATCA TGCAATTCCA 780
AAAGGTCCTA TGGGCTTTTG TGTTTTTGGA AATGTGGCCA TTGCAGCTCG TTATGCCCAA 840
CGTGTACATG GATTAAAGCG TGTGTTTATC ATTGATTTTG ACGTTCATCA TGGGAATGGA 900
ACAAATGATG CATTCTATGA TGACCCAGAT ATATTCTTCC TTTCAACTCA TCAAGATGGA 960
AGCTACCCTG GTACTGGTAA AATTGATGAG GTAGGCCATG GCAGTGGTGA AGGAGCGACA 1020
CTAAATTTGC CCCTACCAGG AGGCTCAGGT GATATTGCCA TGAGGACTGT TTTTGATGAA 1080
GTCATTGTAC CATCTGCCCA GAGGTTCAAG CCAGACATAA TTCTCGTCTC AGCTGGTTAT 1140
GATGGGCATG TATTGGATCC GCTAGCCAGT CTGCAATTTA CTACTGGAAC ATACTACATG 1200
CTTGCATCTA ACATTAAACA GCTCGCCAAA GATCTATGTG GGGGCCGCTG CGTATTTTTC 1260
CTGGAAGGAG GATACAACCT CAGCTCGCTT TCATATTCAG TGGCAGACTC ATTTCGTGCT 1320
TTTCTTGGGG AGCCAAGTTT GGCATCTGAG TTTGATGACC CTGCCATCTT ATATGAAGAG 1380
CCGTCCACTA AGGTGAAACA AGCAATTCAA AAAGTTAAAC ACTTACATTC CCTGTGAAGA 1440
CGTCTAAAAC TTCATGATTC TGCTATGTGA AAGGTTCGTC TTGCTAAAGA TACAGCGTCC 1500
ATGAAACCAC AAGTGAATCA AATGTTGTAT TTAGGCCCTG CACTATCTTT AGTGTCTTGC 1560
TTACCTCAAC ACTAAATCCT GGGTTGTAGA TTCCTCTGAA 1601
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Pot-0060 POPTR_0005s06520.1 Populus trichocarpa 81 0.0 676
WERAM-Met-0183 AET04758 Medicago truncatula 73 0.0 649
WERAM-Glm-0050 GLYMA05G32600.1 Glycine max 75 0.0 649
WERAM-Prp-0071 EMJ12704 Prunus persica 85 6e-180 627
WERAM-Art-0110 AT4G33470.1 Arabidopsis thaliana 74 6e-176 614
WERAM-Bro-0004 Bo1g008110.1 Brassica oleracea 72 7e-175 610
WERAM-Arl-0142 scaffold_700814.1 Arabidopsis lyrata 74 4e-174 608
WERAM-Brr-0061 Bra011444.1-P Brassica rapa 71 4e-173 605
WERAM-Mua-0145 GSMUA_AchrUn_randomP00520_001 Musa acuminata 76 7e-173 603
WERAM-Brd-0117 BRADI4G40960.1 Brachypodium distachyon 68 2e-172 602
WERAM-Tra-0217 Traes_5BS_F36388166.1 Triticum aestivum 70 8e-172 600
WERAM-Sei-0036 Si010171m Setaria italica 66 1e-171 600
WERAM-Sob-0054 Sb03g038950.1 Sorghum bicolor 70 2e-170 596
WERAM-Zem-0142 GRMZM2G456473_P01 Zea mays 75 2e-170 595
WERAM-Orb-0120 OBART12G04910.1 Oryza barthii 75 4e-170 594
WERAM-Orp-0110 OPUNC12G04860.1 Oryza punctata 75 1e-169 593
WERAM-Lep-0114 LPERR12G04530.1 Leersia perrieri 75 1e-169 593
WERAM-Orni-0103 ONIVA09G16260.1 Oryza nivara 75 2e-169 592
WERAM-Org-0113 ORGLA12G0047100.1 Oryza glaberrima 75 2e-169 592
WERAM-Orbr-0123 OB12G14780.1 Oryza brachyantha 74 5e-169 591
WERAM-Ors-0108 OS12T0182700-01 Oryza sativa 75 6e-169 590
WERAM-Ori-0128 BGIOSGA037104-PA Oryza indica 75 9e-169 590
WERAM-Orl-0008 KN538685.1_FGP052 Oryza longistaminata 71 7e-166 580
WERAM-Orgl-0115 OGLUM12G05720.1 Oryza glumaepatula 71 7e-166 580
WERAM-Orr-0120 ORUFI12G05690.1 Oryza rufipogon 71 2e-165 579
WERAM-Amt-0065 ERN18144 Amborella trichopoda 75 6e-164 574
WERAM-Orm-0105 OMERI12G03370.1 Oryza meridionalis 68 2e-163 573
WERAM-Php-0127 PP1S85_154V6.1 Physcomitrella patens 62 6e-161 564
WERAM-Tru-0036 TRIUR3_18154-P1 Triticum urartu 71 3e-155 545
WERAM-Thc-0007 EOX92582 Theobroma cacao 92 1e-136 483
WERAM-Sol-0006 Solyc01g009110.2.1 Solanum lycopersicum 86 4e-134 475
WERAM-Sem-0047 EFJ16002 Selaginella moellendorffii 63 1e-131 467
WERAM-Osl-0036 ABP01312 Ostreococcus lucimarinus 49 5e-98 355
WERAM-Chr-0006 EDP01653 Chlamydomonas reinhardtii 55 3e-56 216
WERAM-Aim-0036 ENSAMEP00000002564.1 Ailuropoda melanoleuca 35 5e-49 192
WERAM-Pof-0042 ENSPFOP00000003781.2 Poecilia formosa 35 8e-49 192
WERAM-Orn-0012 ENSONIP00000001222.1 Oreochromis niloticus 34 1e-48 191
WERAM-Drm-0028 FBpp0290988 Drosophila melanogaster 34 1e-48 191
WERAM-Mup-0023 ENSMPUP00000002307.1 Mustela putorius furo 37 2e-48 190
WERAM-Ten-0099 ENSTNIP00000000138.1 Tetraodon nigroviridis 34 3e-48 190
WERAM-Fec-0119 ENSFCAP00000011049.3 Felis catus 36 3e-48 190
WERAM-Caf-0004 ENSCAFP00000000979.4 Canis familiaris 38 5e-48 189
WERAM-Tut-0141 ENSTTRP00000011664.1 Tursiops truncatus 37 7e-48 188
WERAM-Cae-0060 F41H10.6b Caenorhabditis elegans 36 2e-47 187
WERAM-Myl-0003 ENSMLUP00000000417.2 Myotis lucifugus 40 2e-47 187
WERAM-Tar-0171 ENSTRUP00000035900.1 Takifugu rubripes 34 3e-47 187
WERAM-Gaa-0020 ENSGACP00000002894.1 Gasterosteus aculeatus 34 6e-47 185
WERAM-Dar-0198 ENSDARP00000131327.1 Danio rerio 34 7e-47 185
WERAM-Cag-0018 CAG60803 Candida glabrata 33 7e-47 185
WERAM-Eqc-0086 ENSECAP00000010704.1 Equus caballus 36 9e-47 185
WERAM-Xim-0085 ENSXMAP00000008038.1 Xiphophorus maculatus 33 1e-46 184
WERAM-Cap-0164 ENSCPOP00000013386.2 Cavia porcellus 35 2e-46 184
WERAM-Mum-0213 ENSMUSP00000080832.5 Mus musculus 36 2e-46 183
WERAM-Bot-0106 ENSBTAP00000014602.4 Bos taurus 36 4e-46 183
WERAM-Sus-0012 ENSSSCP00000001039.2 Sus scrofa 36 4e-46 183
WERAM-Spr-0021 CBQ72644 Sporisorium reilianum 35 4e-46 182
WERAM-Ict-0132 ENSSTOP00000013675.2 Ictidomys tridecemlineatus 37 4e-46 182
WERAM-Asn-0017 CADANIAP00004063 Aspergillus nidulans 35 6e-46 182
WERAM-Pat-0122 ENSPTRP00000025053.4 Pan troglodytes 37 9e-46 181
WERAM-Gog-0159 ENSGGOP00000014095.2 Gorilla gorilla 37 9e-46 181
WERAM-Sac-0037 YNL021W Saccharomyces cerevisiae 32 1e-45 181
WERAM-Asm-0202 ENSAMXP00000018862.1 Astyanax mexicanus 34 1e-45 181
WERAM-Xet-0073 ENSXETP00000023344.3 Xenopus tropicalis 34 1e-45 181
WERAM-Hos-0058 ENSP00000216271.5 Homo sapiens 37 1e-45 181
WERAM-Paa-0009 ENSPANP00000013655.1 Papio anubis 37 2e-45 181
WERAM-Ran-0135 ENSRNOP00000027622.5 Rattus norvegicus 33 2e-45 180
WERAM-Ere-0078 ENSEEUP00000006690.1 Erinaceus europaeus 34 2e-45 180
WERAM-Nol-0005 ENSNLEP00000000692.2 Nomascus leucogenys 37 3e-45 179
WERAM-Hov-0018 MLOC_16422.1 Hordeum vulgare 37 3e-45 179
WERAM-Orla-0199 ENSORLP00000022663.1 Oryzias latipes 33 4e-45 179
WERAM-Leo-0082 ENSLOCP00000011105.1 Lepisosteus oculatus 34 5e-45 179
WERAM-Ora-0108 ENSOANP00000020481.2 Ornithorhynchus anatinus 33 5e-45 179
WERAM-Ect-0100 ENSETEP00000011415.1 Echinops telfairi 39 7e-45 178
WERAM-Mel-0037 EGG03660 Melampsora laricipopulina 33 8e-45 178
WERAM-Meg-0023 ENSMGAP00000001752.2 Meleagris gallopavo 34 8e-45 178
WERAM-Fia-0119 ENSFALP00000010264.1 Ficedula albicollis 37 1e-44 178
WERAM-Chs-0051 ENSCSAP00000001305.1 Chlorocebus sabaeus 37 1e-44 178
WERAM-Gaga-0049 ENSGALP00000033098.3 Gallus gallus 34 1e-44 178
WERAM-Gag-0014 GGTG_04308T0 Gaeumannomyces graminis 34 1e-44 178
WERAM-Otg-0149 ENSOGAP00000012689.2 Otolemur garnettii 34 1e-44 178
WERAM-Orc-0102 ENSOCUP00000008741.3 Oryctolagus cuniculus 34 1e-44 178
WERAM-Sah-0095 ENSSHAP00000011018.1 Sarcophilus harrisii 35 1e-44 177
WERAM-Scj-0031 EEB08679 Schizosaccharomyces japonicus 35 2e-44 177
WERAM-Anc-0099 ENSACAP00000009498.3 Anolis carolinensis 33 2e-44 177
WERAM-Coi-0028 EAS30926 Coccidioides immitis 36 2e-44 177
WERAM-Mod-0081 ENSMODP00000012731.2 Monodelphis domestica 35 3e-44 176
WERAM-Lac-0055 ENSLACP00000007918.1 Latimeria chalumnae 36 3e-44 176
WERAM-Anp-0035 ENSAPLP00000004005.1 Anas platyrhynchos 33 3e-44 176
WERAM-Tag-0050 ENSTGUP00000003338.1 Taeniopygia guttata 33 4e-44 176
WERAM-Loa-0107 ENSLAFP00000009167.2 Loxodonta africana 33 4e-44 176
WERAM-Mae-0029 ENSMEUP00000002095.1 Macropus eugenii 36 6e-44 175
WERAM-Crn-0010 AAW42071 Cryptococcus neoformans 36 7e-44 175
WERAM-Asc-0002 CADACLAP00000048 Aspergillus clavatus 34 8e-44 175
WERAM-Pes-0174 ENSPSIP00000020522.1 Pelodiscus sinensis 33 1e-43 175
WERAM-Gam-0051 ENSGMOP00000005244.1 Gadus morhua 35 1e-43 174
WERAM-Pyt-0023 EFQ89752 Pyrenophora teres 33 1e-43 174
WERAM-Pem-0058 ENSPMAP00000006830.1 Petromyzon marinus 36 1e-43 174
WERAM-Aet-0088 EMT31322 Aegilops tauschii 37 2e-43 174
WERAM-Ast-0014 CADATEAP00005667 Aspergillus terreus 33 2e-43 173
WERAM-Pug-0031 EFP89333 Puccinia graminis 32 3e-43 173
WERAM-Map-0033 MAPG_10880T0 Magnaporthe poae 33 7e-43 172
WERAM-Caa-0034 KGT64501 Candida albicans 32 8e-43 172
WERAM-Kll-0020 CAG99415 Kluyveromyces lactis 32 9e-43 171
WERAM-Asg-0010 AAS51704 Ashbya gossypii 33 1e-42 171
WERAM-Ocp-0057 ENSOPRP00000005096.1 Ochotona princeps 34 2e-42 171
WERAM-Chg-0033 EAQ86725 Chaetomium globosum 33 2e-42 171
WERAM-Dio-0075 ENSDORP00000007462.1 Dipodomys ordii 34 2e-42 171
WERAM-Pytr-0015 EDU46537 Pyrenophora triticirepentis 33 2e-42 171
WERAM-Lem-0023 CBX90551 Leptosphaeria maculans 33 2e-42 170
WERAM-Ptv-0156 ENSPVAP00000012934.1 Pteropus vampyrus 33 2e-42 170
WERAM-Caj-0101 ENSCJAP00000017313.2 Callithrix jacchus 33 2e-42 170
WERAM-Poa-0162 ENSPPYP00000019901.2 Pongo abelii 33 3e-42 170
WERAM-Mam-0095 ENSMMUP00000014626.2 Macaca mulatta 33 3e-42 170
Created Date 25-Jun-2016