WERAM Information

Tag Content
WERAM ID WERAM-Sol-0120
Ensembl Protein ID Solyc09g091440.2.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Solyc09g091440.2 Solyc09g091440.2.1 Solyc09g091440.2.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 3.80e-166 553 17 328
Organism Solanum lycopersicum
Domain Profile
  HDAC Class-I
         class-1.txt   1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvged 91 
                         +kv+y+yd++vg+y+ygq+hpmkp+r+++th L+ +ygl ++++++kp+ a+ ++l++fh+++yi fl++v+pe++++  ++lk+fnvged
  Solyc09g091440.2.1  17 RKVSYFYDPEVGNYYYGQGHPMKPHRMRMTHALLAHYGLLQHMHVLKPNPARDKDLCRFHADDYIAFLRSVTPETQQDQLRQLKRFNVGED 107
                         589**************************************************************************************** PP
         class-1.txt  92 cPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafytt 182
                         cPvfdgl+++cq+++G+s+ +a kLn++++dia+nwaGGlhhakk+easGfcyvnDivlailellk h+rvly+did+hhGDgveeafytt
  Solyc09g091440.2.1 108 CPVFDGLYSFCQTYAGGSVGGAVKLNHGHCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKVHERVLYVDIDIHHGDGVEEAFYTT 198
                         ******************************************************************************************* PP
         class-1.txt 183 drvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikg 273
                         drvmtvsfhk+g+ +fPgtGd++d+g ++gkyy++nvPl+dgidDesy+++fk+++ kv+e+f+P avvlqcGaDsl+gDrlg+fnlsikg
  Solyc09g091440.2.1 199 DRVMTVSFHKFGD-YFPGTGDVRDIGYGSGKYYSLNVPLDDGIDDESYQSLFKPIMGKVMEVFKPGAVVLQCGADSLSGDRLGCFNLSIKG 288
                         *************.***************************************************************************** PP
         class-1.txt 274 haecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
                         haecvk+++sfn+pll+lGGGGYt+rnvaRcw+yet+v+l
  Solyc09g091440.2.1 289 HAECVKYMRSFNVPLLLLGGGGYTIRNVARCWCYETGVAL 328
                         *************************************986 PP
Protein Sequence
(Fasta)		MDVGGNSLAS GADGKKRKVS YFYDPEVGNY YYGQGHPMKP HRMRMTHALL AHYGLLQHMH 60
VLKPNPARDK DLCRFHADDY IAFLRSVTPE TQQDQLRQLK RFNVGEDCPV FDGLYSFCQT 120
YAGGSVGGAV KLNHGHCDIA VNWAGGLHHA KKCEASGFCY VNDIVLAILE LLKVHERVLY 180
VDIDIHHGDG VEEAFYTTDR VMTVSFHKFG DYFPGTGDVR DIGYGSGKYY SLNVPLDDGI 240
DDESYQSLFK PIMGKVMEVF KPGAVVLQCG ADSLSGDRLG CFNLSIKGHA ECVKYMRSFN 300
VPLLLLGGGG YTIRNVARCW CYETGVALGI ELEDKMPQHE YYEYFGPDYT LHVAPSNMEN 360
KNSRQILEDI RSKLLDNLSK LQHAPSVQFQ ERPPDTELPE ADEDLEDADS RWDADSDTNG 420
EERKPNPSRV RREHVEPEGK GTDDMKTEEH LREVESTFAE STSLKGGNSS STLIDGGQIK 480
VEQGNSNKLF DQPTDIIS 498
Nucleotide Sequence
(Fasta)		TGAAGACATA AATATATTTT ACATCTGGTT TTTTCTTCTC TACTCAACCT TTAGCGATCT 60
CTACTGTAGT GGCCGCTTCT TCTGGTTTTC ACTTTCAGGT TTATCCTTAC TGGTTTATAG 120
CTTGGGAAAT GGATGTTGGA GGAAACTCCT TAGCATCTGG TGCAGATGGA AAGAAGAGAA 180
AAGTAAGTTA TTTCTATGAT CCTGAAGTTG GTAATTACTA TTATGGACAA GGCCATCCAA 240
TGAAGCCACA TAGAATGCGG ATGACACATG CTCTTCTTGC CCACTATGGT CTATTACAAC 300
ACATGCATGT TCTGAAGCCA AATCCTGCTA GAGATAAGGA TCTCTGTAGG TTTCATGCTG 360
ATGATTATAT TGCTTTCTTG AGAAGCGTAA CACCAGAAAC ACAGCAAGAT CAGCTGAGGC 420
AGCTGAAGAG GTTCAATGTC GGGGAGGACT GTCCAGTTTT TGATGGTCTT TATTCCTTCT 480
GCCAAACCTA CGCTGGAGGT TCTGTTGGTG GGGCAGTTAA GTTGAACCAT GGACACTGTG 540
ATATCGCTGT AAATTGGGCT GGTGGATTGC ATCATGCCAA GAAATGTGAA GCATCTGGTT 600
TCTGCTATGT GAACGATATC GTGTTGGCTA TTCTGGAGCT ACTCAAAGTC CATGAGAGAG 660
TATTGTATGT GGATATTGAT ATCCATCATG GTGATGGCGT GGAAGAGGCC TTCTATACTA 720
CAGATAGGGT CATGACAGTT TCCTTTCATA AATTTGGAGA TTACTTTCCT GGTACAGGGG 780
ATGTACGTGA TATTGGTTAT GGAAGTGGAA AATACTACTC TCTAAATGTT CCACTAGATG 840
ATGGAATTGA TGATGAGAGC TATCAGTCCC TCTTTAAGCC TATTATGGGC AAAGTGATGG 900
AAGTTTTTAA GCCTGGTGCT GTGGTTTTGC AATGTGGTGC AGATTCCTTG TCTGGCGATC 960
GGCTAGGCTG CTTTAATCTC TCTATTAAAG GTCATGCTGA ATGTGTCAAG TACATGAGGT 1020
CTTTCAATGT GCCATTGTTG TTGCTTGGTG GAGGCGGCTA CACAATACGT AATGTTGCTC 1080
GTTGCTGGTG TTACGAAACA GGAGTTGCAT TAGGAATAGA GCTTGAAGAT AAGATGCCGC 1140
AACATGAATA TTATGAATAC TTTGGTCCAG ATTATACCTT GCATGTCGCT CCAAGTAACA 1200
TGGAGAACAA AAATTCTCGT CAGATTTTAG AAGATATAAG ATCAAAGCTG CTTGATAATC 1260
TTTCAAAGCT TCAGCATGCC CCAAGTGTGC AGTTCCAGGA GCGACCACCG GATACTGAAT 1320
TGCCTGAGGC TGATGAAGAT CTAGAGGATG CAGATTCAAG ATGGGATGCT GATTCTGACA 1380
CAAATGGCGA AGAACGTAAG CCCAATCCTA GCAGAGTGAG GAGGGAACAT GTTGAACCTG 1440
AAGGAAAAGG CACGGACGAT ATGAAAACAG AAGAGCACCT AAGAGAAGTA GAATCGACAT 1500
TCGCAGAGTC AACAAGTTTG AAGGGTGGCA ATTCAAGTTC TACACTGATA GATGGAGGAC 1560
AGATTAAAGT GGAACAAGGA AACTCTAACA AGCTTTTTGA TCAACCAACT GATATTATCT 1620
CCTAAATAGA CTTTTTCAAT CTTTTAAACT TTACTGTAAT GTATGATTCT TTAAATTATA 1680
CATTTGAGTC TACTTGTTAT GCACACTAAT TTACAGATAT GATATGATCC ATGAACAATC 1740
TCCCTCACCT CACCTCCCCG AATCGAAATC GCGCTTCTTT CATTCATATT AGTTGGAGAA 1800
AAAGAACATG CCAATATGTC AATTGACAAG AG 1833
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sot-0088 PGSC0003DMT400076252 Solanum tuberosum 90 0.0 931
WERAM-Viv-0012 VIT_03s0038g04240.t01 Vitis vinifera 84 0.0 817
WERAM-Thc-0026 EOX98961 Theobroma cacao 84 0.0 808
WERAM-Pot-0051 POPTR_0004s21950.1 Populus trichocarpa 84 0.0 806
WERAM-Glm-0156 GLYMA13G06010.3 Glycine max 82 0.0 791
WERAM-Prp-0056 EMJ02177 Prunus persica 81 0.0 777
WERAM-Art-0112 AT4G38130.1 Arabidopsis thaliana 81 0.0 776
WERAM-Brr-0202 Bra040131.1-P Brassica rapa 82 0.0 774
WERAM-Arl-0038 fgenesh1_pm.C_scaffold_7000002 Arabidopsis lyrata 81 0.0 773
WERAM-Bro-0021 Bo1g151980.1 Brassica oleracea 82 0.0 772
WERAM-Met-0084 KEH36404 Medicago truncatula 80 0.0 762
WERAM-Brd-0020 BRADI1G37290.1 Brachypodium distachyon 76 0.0 758
WERAM-Orb-0066 OBART06G19560.1 Oryza barthii 78 0.0 753
WERAM-Ors-0059 OS06T0583400-01 Oryza sativa 78 0.0 753
WERAM-Orbr-0074 OB06G27130.1 Oryza brachyantha 78 0.0 753
WERAM-Orp-0064 OPUNC06G17670.1 Oryza punctata 78 0.0 752
WERAM-Sei-0026 Si006243m Setaria italica 78 0.0 750
WERAM-Orgl-0064 OGLUM06G20570.1 Oryza glumaepatula 76 0.0 748
WERAM-Orr-0068 ORUFI06G20660.1 Oryza rufipogon 76 0.0 747
WERAM-Sob-0135 Sb10g022820.1 Sorghum bicolor 78 0.0 746
WERAM-Tra-0318 Traes_7DL_578CF3F0D.2 Triticum aestivum 83 0.0 745
WERAM-Ori-0039 BGIOSGA012324-PA Oryza indica 86 0.0 738
WERAM-Php-0088 PP1S351_29V6.1 Physcomitrella patens 85 0.0 735
WERAM-Orm-0063 OMERI06G19730.1 Oryza meridionalis 86 0.0 732
WERAM-Zem-0099 GRMZM2G172883_P01 Zea mays 86 0.0 728
WERAM-Amt-0016 ERM94967 Amborella trichopoda 88 0.0 725
WERAM-Aet-0051 EMT16627 Aegilops tauschii 76 0.0 722
WERAM-Orni-0065 ONIVA06G23170.1 Oryza nivara 77 0.0 718
WERAM-Lep-0066 LPERR06G16070.1 Leersia perrieri 78 0.0 699
WERAM-Sem-0132 EFJ35052 Selaginella moellendorffii 85 0.0 699
WERAM-Hov-0099 MLOC_71091.1 Hordeum vulgare 89 0.0 693
WERAM-Mua-0048 GSMUA_Achr2P19590_001 Musa acuminata 67 8e-178 620
WERAM-Osl-0002 ABO94711 Ostreococcus lucimarinus 73 8e-174 607
WERAM-Tag-0022 ENSTGUP00000001473.1 Taeniopygia guttata 69 2e-168 589
WERAM-Gaga-0034 ENSGALP00000005212.3 Gallus gallus 69 2e-168 589
WERAM-Ran-0062 ENSRNOP00000012854.5 Rattus norvegicus 69 2e-168 589
WERAM-Mum-0093 ENSMUSP00000099657.4 Mus musculus 69 2e-168 589
WERAM-Org-0090 ORGLA08G0103000.1 Oryza glaberrima 68 3e-168 588
WERAM-Ocp-0006 ENSOPRP00000000780.1 Ochotona princeps 69 3e-168 588
WERAM-Ova-0221 ENSOARP00000022517.1 Ovis aries 69 3e-168 588
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 69 3e-168 588
WERAM-Orc-0030 ENSOCUP00000003186.2 Oryctolagus cuniculus 69 4e-168 588
WERAM-Otg-0072 ENSOGAP00000005101.2 Otolemur garnettii 69 5e-168 588
WERAM-Cap-0092 ENSCPOP00000006985.2 Cavia porcellus 69 5e-168 588
WERAM-Hos-0092 ENSP00000362649.3 Homo sapiens 69 6e-168 588
WERAM-Gog-0132 ENSGGOP00000011454.2 Gorilla gorilla 69 6e-168 588
WERAM-Anc-0033 ENSACAP00000004062.3 Anolis carolinensis 69 6e-168 587
WERAM-Nol-0026 ENSNLEP00000003167.1 Nomascus leucogenys 69 6e-168 587
WERAM-Ptv-0152 ENSPVAP00000012567.1 Pteropus vampyrus 69 2e-167 586
WERAM-Mup-0173 ENSMPUP00000015122.1 Mustela putorius furo 69 2e-167 586
WERAM-Loa-0056 ENSLAFP00000004079.2 Loxodonta africana 68 2e-167 586
WERAM-Dan-0175 ENSDNOP00000033349.1 Dasypus novemcinctus 69 5e-167 584
WERAM-Caf-0116 ENSCAFP00000015619.3 Canis familiaris 69 1e-166 583
WERAM-Poa-0013 ENSPPYP00000001838.2 Pongo abelii 68 1e-166 583
WERAM-Myl-0152 ENSMLUP00000012593.2 Myotis lucifugus 69 3e-166 582
WERAM-Aim-0087 ENSAMEP00000008076.1 Ailuropoda melanoleuca 68 2e-164 576
WERAM-Pes-0020 ENSPSIP00000004435.1 Pelodiscus sinensis 68 5e-164 575
WERAM-Chs-0011 ENSCSAP00000016960.1 Chlorocebus sabaeus 69 9e-164 574
WERAM-Meg-0047 ENSMGAP00000004521.2 Meleagris gallopavo 68 1e-163 573
WERAM-Pat-0210 ENSPTRP00000060659.1 Pan troglodytes 69 1e-163 573
WERAM-Sus-0201 ENSSSCP00000023024.1 Sus scrofa 69 3e-163 572
WERAM-Orn-0090 ENSONIP00000010308.1 Oreochromis niloticus 69 7e-163 571
WERAM-Tut-0167 ENSTTRP00000014262.1 Tursiops truncatus 66 8e-163 571
WERAM-Eqc-0125 ENSECAP00000014039.1 Equus caballus 69 8e-163 570
WERAM-Tar-0062 ENSTRUP00000012875.1 Takifugu rubripes 69 1e-162 570
WERAM-Anp-0136 ENSAPLP00000014652.1 Anas platyrhynchos 68 2e-162 569
WERAM-Gaa-0072 ENSGACP00000009568.1 Gasterosteus aculeatus 69 3e-162 569
WERAM-Pof-0181 ENSPFOP00000015600.1 Poecilia formosa 69 3e-162 568
WERAM-Orla-0192 ENSORLP00000021872.1 Oryzias latipes 69 3e-162 568
WERAM-Leo-0014 ENSLOCP00000002993.1 Lepisosteus oculatus 70 4e-162 568
WERAM-Cii-0014 ENSCINP00000005410.3 Ciona intestinalis 66 4e-162 568
WERAM-Dar-0035 ENSDARP00000051798.4 Danio rerio 69 6e-162 568
WERAM-Xim-0229 ENSXMAP00000019038.1 Xiphophorus maculatus 69 6e-162 568
WERAM-Drm-0018 FBpp0073173 Drosophila melanogaster 65 7e-162 567
WERAM-Gam-0211 ENSGMOP00000020496.1 Gadus morhua 69 2e-161 566
WERAM-Asm-0151 ENSAMXP00000014739.1 Astyanax mexicanus 68 2e-161 566
WERAM-Ten-0109 ENSTNIP00000012136.1 Tetraodon nigroviridis 69 9e-161 564
WERAM-Xet-0037 ENSXETP00000011480.3 Xenopus tropicalis 68 2e-160 563
WERAM-Tru-0006 TRIUR3_03674-P1 Triticum urartu 81 1e-159 560
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 67 3e-159 558
WERAM-Paa-0030 ENSPANP00000015145.1 Papio anubis 67 5e-159 558
WERAM-Mod-0165 ENSMODP00000022264.3 Monodelphis domestica 67 5e-159 558
WERAM-Fia-0139 ENSFALP00000011453.1 Ficedula albicollis 67 6e-159 558
WERAM-Ict-0111 ENSSTOP00000011457.2 Ictidomys tridecemlineatus 67 6e-159 558
WERAM-Fec-0127 ENSFCAP00000011581.3 Felis catus 69 5e-156 548
WERAM-Coi-0024 EAS33504 Coccidioides immitis 63 9e-155 544
WERAM-Sah-0134 ENSSHAP00000014467.1 Sarcophilus harrisii 68 9e-155 544
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 62 1e-154 543
WERAM-Ere-0068 ENSEEUP00000005465.1 Erinaceus europaeus 68 2e-154 543
WERAM-Asn-0024 CADANIAP00005952 Aspergillus nidulans 62 6e-154 541
WERAM-Asc-0037 CADACLAP00008612 Aspergillus clavatus 62 1e-153 540
WERAM-Asni-0020 CADANGAP00005938 Aspergillus niger 61 1e-153 540
WERAM-Asfu-0015 CADAFUAP00003503 Aspergillus fumigatus 62 4e-153 538
WERAM-Trv-0003 EHK19072 Trichoderma virens 63 1e-152 537
WERAM-Cym-0014 CMJ129CT Cyanidioschyzon merolae 66 1e-152 536
WERAM-Ved-0020 EGY15146 Verticillium dahliae 60 2e-152 536
WERAM-Tas-0085 ENSTSYP00000008588.1 Tarsius syrichta 67 2e-152 536
WERAM-Cae-0005 C53A5.3 Caenorhabditis elegans 63 7e-152 534
WERAM-Scs-0023 EDO03342 Sclerotinia sclerotiorum 61 9e-152 534
WERAM-Map-0015 MAPG_05105T0 Magnaporthe poae 62 5e-151 531
WERAM-Gag-0026 GGTG_08607T0 Gaeumannomyces graminis 61 6e-151 531
WERAM-Trr-0017 EGR48353 Trichoderma reesei 63 3e-150 529
WERAM-Prc-0059 ENSPCAP00000005589.1 Procavia capensis 65 3e-150 529
WERAM-Mao-0017 MGG_05857T0 Magnaporthe oryzae 61 1e-149 526
WERAM-Cag-0003 CAG57932 Candida glabrata 61 2e-149 526
WERAM-Kll-0018 CAG99124 Kluyveromyces lactis 61 3e-149 525
WERAM-Caa-0018 KGT69072 Candida albicans 59 6e-149 525
WERAM-Spr-0005 CBQ70764 Sporisorium reilianum 62 1e-148 524
WERAM-Asg-0034 AAS54885 Ashbya gossypii 61 2e-148 523
WERAM-Mae-0008 ENSMEUP00000000621.1 Macropus eugenii 58 2e-148 523
WERAM-Lac-0087 ENSLACP00000011092.1 Latimeria chalumnae 62 2e-148 523
WERAM-Sac-0039 YNL330C Saccharomyces cerevisiae 61 3e-148 522
Created Date 25-Jun-2016