| Tag |
Content |
| WERAM ID |
WERAM-Sei-0017 |
| Ensembl Protein ID |
Si004835m |
| Gene Name |
SETIT_004835mg |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
2.00e-100 |
337.4 |
19 |
319 |
|
| Organism |
Setaria italica |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenae...elskelkkfnvge..... 90
++v+y+yd ++++ yg++h+m+p+r+ ++h L+ +ygl ++ +++++ a+a+e++ fh e y+ +l+ v+pe e+++ k fnvg
Si004835m 19 RRVCYYYDRGIASVDYGEDHVMVPRRVDMAHALIRSYGLLGDMARLRTRPATADEISGFHDEGYVGLLRDVTPEGFAaggEMTHAAKGFNVGAfakdd 116
589***********************************************************************98877789999******9666666 PP
class-1.txt 91 ...dcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyidid 168
d P + gl++yc+ ++G+sl+aa+ L ++ea+iainw+GGlhha +++asGfcyvnDivlai ell ++rvly+did
Si004835m 117 rsvDNPPIAGLWDYCRRYAGGSLAAARALVSGEAEIAINWSGGLHHACRERASGFCYVNDIVLAIHELLGRFRRVLYVDID 197
7778999*************************************************************************9 PP
class-1.txt 195 eeffPgt.GdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksfnlpllvl 291
++ffPg G ++++g+y avnvPl++g+dD+ y+ +f++++ kv+e+f+Pea+v+qcG+Dsl+gDrlg+ nlsi gha+cv+f++s+nlpll+l
Si004835m 200 KNFFPGReGARGARRVGDGQYRAVNVPLNEGMDDQGYHGLFRPIMAKVMEVFQPEAIVMQCGGDSLSGDRLGNQNLSIAGHAQCVRFMRSYNLPLLLL 297
56***96366667889********************************************************************************** PP
class-1.txt 292 GGGGYtlrnvaRcwtyetavvl 313
GGGGYt++ va cw+yetav++
Si004835m 298 GGGGYTVNHVAACWCYETAVAI 319
*******************975 PP
|
Protein Sequence
(Fasta) | MDTGGNSLPS QSCPDGPKRR VCYYYDRGIA SVDYGEDHVM VPRRVDMAHA LIRSYGLLGD 60
MARLRTRPAT ADEISGFHDE GYVGLLRDVT PEGFAAGGEM THAAKGFNVG AFAKDDRSVD 120
NPPIAGLWDY CRRYAGGSLA AARALVSGEA EIAINWSGGL HHACRERASG FCYVNDIVLA 180
IHELLGRFRR VLYVDIDRTK NFFPGREGAR GARRVGDGQY RAVNVPLNEG MDDQGYHGLF 240
RPIMAKVMEV FQPEAIVMQC GGDSLSGDRL GNQNLSIAGH AQCVRFMRSY NLPLLLLGGG 300
GYTVNHVAAC WCYETAVAIG KEIDDAIPVH CYDSYYRSQG YKLHYPVAKG IKNDNTDFHV 360
TRTMSIVMRN LTHLEAAPSV GFVDPAGGMS IDAEALFCRA PPREDDDPME RLHRLCGEID 420
ERSFLMELGK RHLDLAKDKD GDQLQPHRDR SEPVKRQRSE KLYCKY 466Protein Fasta Sequence
>Si004835m|Class-I|Setaria italica
MDTGGNSLPSQSCPDGPKRRVCYYYDRGIASVDYGEDHVMVPRRVDMAHALIRSYGLLGDMARLRTRPATADEISGFHDEGYVGLLRDVTPEGFAAGGEMTHAAKGFNVGAFAKDDRSVDNPPIAGLWDYCRRYAGGSLAAARALVSGEAEIAINWSGGLHHACRERASGFCYVNDIVLAIHELLGRFRRVLYVDIDRTKNFFPGREGARGARRVGDGQYRAVNVPLNEGMDDQGYHGLFRPIMAKVMEVFQPEAIVMQCGGDSLSGDRLGNQNLSIAGHAQCVRFMRSYNLPLLLLGGGGYTVNHVAACWCYETAVAIGKEIDDAIPVHCYDSYYRSQGYKLHYPVAKGIKNDNTDFHVTRTMSIVMRNLTHLEAAPSVGFVDPAGGMSIDAEALFCRAPPREDDDPMERLHRLCGEIDERSFLMELGKRHLDLAKDKDGDQLQPHRDRSEPVKRQRSEKLYCKY |
Nucleotide Sequence
(Fasta) | ATGGATACCG GCGGCAACTC GCTGCCGTCG CAGTCGTGCC CCGACGGCCC GAAGCGGCGC 60
GTGTGCTACT ACTACGACCG CGGCATCGCC AGCGTCGACT ACGGCGAGGA CCACGTCATG 120
GTGCCCCGCC GCGTCGACAT GGCGCACGCG CTCATCCGCT CCTACGGCCT GCTCGGCGAC 180
ATGGCCCGCC TCCGCACGCG TCCCGCCACC GCCGACGAGA TCTCCGGCTT CCACGACGAG 240
GGCTACGTCG GCCTCCTGCG CGACGTCACC CCGGAGGGCT TCGCCGCCGG TGGCGAGATG 300
ACGCACGCAG CCAAGGGCTT CAACGTCGGC GCGTTCGCCA AGGACGACCG CTCCGTCGAC 360
AACCCCCCCA TTGCCGGCCT CTGGGACTAC TGCCGTCGCT ACGCCGGCGG GTCGCTGGCC 420
GCGGCGCGCG CGCTCGTGTC CGGCGAGGCC GAGATCGCCA TCAACTGGTC CGGCGGCTTG 480
CACCACGCGT GCCGGGAGAG GGCCAGCGGC TTCTGCTACG TGAACGACAT CGTGCTCGCC 540
ATCCACGAGC TCCTCGGCCG CTTCCGCCGC GTGCTGTACG TGGACATCGA CCGCACCAAG 600
AACTTCTTCC CGGGACGGGA AGGGGCTCGT GGAGCACGTC GCGTCGGGGA CGGCCAGTAC 660
CGCGCCGTCA ACGTGCCGCT GAACGAGGGC ATGGACGACC AGGGGTACCA CGGGCTGTTC 720
AGGCCCATCA TGGCCAAGGT CATGGAGGTG TTCCAGCCGG AGGCCATCGT GATGCAGTGC 780
GGCGGCGACT CGCTCTCCGG CGACAGGCTC GGCAACCAGA ACCTGTCCAT CGCCGGCCAC 840
GCCCAGTGCG TCAGGTTCAT GCGGAGCTAC AACTTACCGC TGCTCCTCCT CGGCGGCGGC 900
GGTTACACCG TCAACCACGT CGCCGCCTGC TGGTGCTACG AGACGGCGGT CGCCATTGGC 960
AAGGAGATCG ACGACGCCAT ACCGGTGCAC TGCTACGACA GCTACTACAG GAGCCAGGGC 1020
TACAAGCTCC ATTACCCGGT GGCCAAGGGG ATCAAGAACG ACAACACGGA CTTCCACGTG 1080
ACGCGCACGA TGAGCATCGT CATGCGGAAC CTCACCCATC TCGAGGCCGC GCCGAGCGTC 1140
GGGTTCGTGG ACCCGGCCGG CGGGATGAGC ATCGACGCCG AGGCGCTCTT CTGCAGAGCG 1200
CCGCCGCGGG AGGACGACGA CCCCATGGAG AGGCTGCACC GACTGTGCGG CGAGATAGAC 1260
GAGCGCAGCT TCCTGATGGA GTTGGGGAAG CGACACCTCG ACTTGGCCAA GGACAAAGAT 1320
GGCGATCAAC TGCAGCCGCA TCGCGATCGG TCCGAACCGG TAAAAAGGCA ACGGTCCGAA 1380
AAGTTGTATT GTAAATACTG A
1402Nucleotide Fasta Sequence
>Si004835m|Class-I|Setaria italica
ATGGATACCGGCGGCAACTCGCTGCCGTCGCAGTCGTGCCCCGACGGCCCGAAGCGGCGCGTGTGCTACTACTACGACCGCGGCATCGCCAGCGTCGACTACGGCGAGGACCACGTCATGGTGCCCCGCCGCGTCGACATGGCGCACGCGCTCATCCGCTCCTACGGCCTGCTCGGCGACATGGCCCGCCTCCGCACGCGTCCCGCCACCGCCGACGAGATCTCCGGCTTCCACGACGAGGGCTACGTCGGCCTCCTGCGCGACGTCACCCCGGAGGGCTTCGCCGCCGGTGGCGAGATGACGCACGCAGCCAAGGGCTTCAACGTCGGCGCGTTCGCCAAGGACGACCGCTCCGTCGACAACCCCCCCATTGCCGGCCTCTGGGACTACTGCCGTCGCTACGCCGGCGGGTCGCTGGCCGCGGCGCGCGCGCTCGTGTCCGGCGAGGCCGAGATCGCCATCAACTGGTCCGGCGGCTTGCACCACGCGTGCCGGGAGAGGGCCAGCGGCTTCTGCTACGTGAACGACATCGTGCTCGCCATCCACGAGCTCCTCGGCCGCTTCCGCCGCGTGCTGTACGTGGACATCGACCGCACCAAGAACTTCTTCCCGGGACGGGAAGGGGCTCGTGGAGCACGTCGCGTCGGGGACGGCCAGTACCGCGCCGTCAACGTGCCGCTGAACGAGGGCATGGACGACCAGGGGTACCACGGGCTGTTCAGGCCCATCATGGCCAAGGTCATGGAGGTGTTCCAGCCGGAGGCCATCGTGATGCAGTGCGGCGGCGACTCGCTCTCCGGCGACAGGCTCGGCAACCAGAACCTGTCCATCGCCGGCCACGCCCAGTGCGTCAGGTTCATGCGGAGCTACAACTTACCGCTGCTCCTCCTCGGCGGCGGCGGTTACACCGTCAACCACGTCGCCGCCTGCTGGTGCTACGAGACGGCGGTCGCCATTGGCAAGGAGATCGACGACGCCATACCGGTGCACTGCTACGACAGCTACTACAGGAGCCAGGGCTACAAGCTCCATTACCCGGTGGCCAAGGGGATCAAGAACGACAACACGGACTTCCACGTGACGCGCACGATGAGCATCGTCATGCGGAACCTCACCCATCTCGAGGCCGCGCCGAGCGTCGGGTTCGTGGACCCGGCCGGCGGGATGAGCATCGACGCCGAGGCGCTCTTCTGCAGAGCGCCGCCGCGGGAGGACGACGACCCCATGGAGAGGCTGCACCGACTGTGCGGCGAGATAGACGAGCGCAGCTTCCTGATGGAGTTGGGGAAGCGACACCTCGACTTGGCCAAGGACAAAGATGGCGATCAACTGCAGCCGCATCGCGATCGGTCCGAACCGGTAAAAAGGCAACGGTCCGAAAAGTTGTATTGTAAATACTGA
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
