WERAM Information

Tag Content
WERAM ID WERAM-Sob-0135
Ensembl Protein ID Sb10g022820.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb10g022820 Sb10g022820.1 Sb10g022820.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 1.20e-163 544.9 22 332
Organism Sorghum bicolor
Domain Profile
  HDAC Class-I
    class-1.txt   1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfd 96 
                    ++v+y+yd +vg+y+ygq+hpmkp+r+++th L+  ygl  ++++++p+ a+ ++l++fh+++y+ fl++v+pe++++ ++ lk+fnvgedcPvfd
  Sb10g022820.1  22 RRVCYFYDAEVGNYYYGQGHPMKPHRIRMTHALLGRYGLLDQMQVLRPHPARDRDLCRFHADDYVAFLRSVTPETQQDQIRALKRFNVGEDCPVFD 117
                    589********************************************************************************************* PP
    class-1.txt  97 glfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvmtvsfhk 192
                    gl+++cq+++G+s+ +a kLn++  diainwaGGlhhakk+easGfcyvnDivlailellk+h+rvly+did+hhGDgveeafyttdrvmtvsfhk
  Sb10g022820.1 118 GLYSFCQTYAGGSVGGAVKLNHG-HDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKYHQRVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHK 212
                    ********************997.59********************************************************************** PP
    class-1.txt 193 ygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksfnlpl 288
                    +g+ +fPgtGd++dvg+ kgkyy++nvPl+dgidDesy+++fk+++ kv+e+f+P avvlqcGaDsl+gDrlg+fnlsikghaecv+f++sfn+pl
  Sb10g022820.1 213 FGD-YFPGTGDIRDVGHSKGKYYSLNVPLDDGIDDESYQSLFKPIMGKVMEVFNPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRFMRSFNVPL 307
                    ***.******************************************************************************************** PP
    class-1.txt 289 lvlGGGGYtlrnvaRcwtyetavvl 313
                    l+lGGGGYt+rnvaRcw+yet+v+l
  Sb10g022820.1 308 LLLGGGGYTIRNVARCWCYETGVAL 332
                    **********************986 PP
Protein Sequence
(Fasta)		MDASAGGGGN SLPTTGADGS KRRVCYFYDA EVGNYYYGQG HPMKPHRIRM THALLGRYGL 60
LDQMQVLRPH PARDRDLCRF HADDYVAFLR SVTPETQQDQ IRALKRFNVG EDCPVFDGLY 120
SFCQTYAGGS VGGAVKLNHG HDIAINWAGG LHHAKKCEAS GFCYVNDIVL AILELLKYHQ 180
RVLYVDIDIH HGDGVEEAFY TTDRVMTVSF HKFGDYFPGT GDIRDVGHSK GKYYSLNVPL 240
DDGIDDESYQ SLFKPIMGKV MEVFNPGAVV LQCGADSLSG DRLGCFNLSI KGHAECVRFM 300
RSFNVPLLLL GGGGYTIRNV ARCWCYETGV ALGHELTDKM PPNEYYEYFG PDYTLHVAPS 360
NMENKNTRHQ LDDIKSKLLD NLSKLRHAPS VQFQERPPEA ELPEQDEDKE NPDERRDADS 420
DVEMNDAKPL DDYGRRGSIQ NLRMKKESAE TEAVDQDVNS AAAEHSRGTG PVADGVGSSK 480
QTFPNDTTPM SIDEPNVLKV EQQSPNKLQD QPTMHQKP 518
Nucleotide Sequence
(Fasta)		ATGGACGCGT CTGCCGGCGG CGGCGGCAAC TCCCTGCCGA CCACTGGCGC GGACGGGTCG 60
AAGCGCCGCG TCTGCTACTT CTACGACGCG GAGGTGGGCA ACTACTACTA CGGGCAGGGC 120
CACCCGATGA AGCCGCACCG CATCCGCATG ACCCACGCGC TGCTCGGCCG CTACGGCCTC 180
CTCGACCAGA TGCAAGTGCT CCGCCCTCAC CCTGCCCGCG ACCGCGACCT CTGCCGCTTC 240
CACGCCGACG ACTACGTCGC CTTCCTCCGC TCCGTCACCC CCGAGACGCA GCAGGACCAG 300
ATCCGCGCGC TCAAGCGCTT CAACGTCGGC GAGGACTGCC CCGTCTTCGA CGGTCTCTAC 360
AGTTTCTGCC AGACCTACGC GGGGGGCTCC GTTGGCGGCG CCGTCAAGCT CAACCACGGC 420
CATGACATCG CCATCAACTG GGCCGGCGGA CTCCACCACG CCAAGAAGTG CGAGGCCTCC 480
GGGTTCTGCT ATGTTAATGA CATCGTCCTC GCCATCCTCG AGCTACTAAA GTATCACCAG 540
CGCGTTCTGT ACGTGGATAT TGATATCCAC CACGGGGACG GCGTGGAGGA GGCTTTTTAC 600
ACCACAGACC GGGTCATGAC GGTCTCATTC CACAAGTTTG GGGATTATTT CCCTGGGACA 660
GGGGACATTC GTGATGTTGG GCACTCAAAG GGTAAATATT ACTCCCTGAA TGTTCCGCTG 720
GACGACGGTA TTGATGATGA AAGCTATCAG TCGTTGTTCA AGCCAATAAT GGGTAAGGTG 780
ATGGAGGTCT TCAACCCTGG TGCAGTTGTC CTCCAGTGTG GTGCAGATTC ATTATCAGGT 840
GACAGATTGG GCTGTTTCAA CCTCTCTATT AAGGGTCATG CAGAATGTGT AAGATTTATG 900
AGGTCCTTCA ATGTCCCGCT GTTGCTGCTT GGTGGTGGAG GTTATACCAT AAGAAACGTT 960
GCACGGTGTT GGTGCTATGA GACAGGAGTT GCCCTTGGTC ATGAGCTCAC TGACAAGATG 1020
CCACCTAATG AGTACTATGA GTATTTTGGT CCAGATTACA CTCTACATGT TGCTCCAAGT 1080
AACATGGAGA ATAAAAACAC ACGGCATCAA TTGGATGATA TAAAATCAAA ACTTCTAGAT 1140
AATCTTTCGA AACTCCGACA TGCTCCTAGT GTTCAATTTC AAGAGCGACC TCCTGAGGCT 1200
GAGTTACCTG AGCAAGATGA AGACAAAGAG AATCCTGATG AAAGACGTGA TGCTGATTCT 1260
GATGTGGAAA TGAATGATGC CAAGCCTTTG GATGACTATG GGAGGAGGGG CAGCATACAG 1320
AATTTAAGAA TGAAGAAAGA GTCTGCTGAG ACAGAGGCAG TTGATCAGGA TGTTAATAGT 1380
GCAGCTGCAG AACATTCTAG AGGCACTGGA CCTGTGGCTG ATGGAGTTGG TTCCTCGAAA 1440
CAAACCTTTC CGAACGACAC TACTCCGATG TCCATAGATG AACCAAACGT TCTGAAAGTT 1500
GAGCAACAGA GTCCAAACAA ATTGCAGGAC CAACCGACGA TGCACCAGAA GCCATGATCA 1560
CCTTAACATA GTAGCTAATG TCATCTGTAG CCTGTCGATT CTTTTGTGCA AATTCATTTG 1620
ACTGTAGGCA AGCCGTGCAT GTCACAAGGC TGAAGCAGGG AGCAGAAGCA AATGCTAACC 1680
AAGAAGTTGT GCATCTGAAA TCTATAGTGT TTTGCGCGTT GCATTTGTAT TACGAACAGT 1740
TGAAAACGAT GATTTACTGG TTTATAATCA TGAAATTTTG TCTTCCATCC TTTGCTTATG 1800
CAGAGGAAGG AATTGATATT GTCGTATGCA TCAGTTAAGT AGTGCTTTTG TCGCAGATGT 1860
CCATGTGATT GTAATGTGCA GGAACTAGAG GAATT 1896
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sei-0026 Si006243m Setaria italica 95 0.0 1020
WERAM-Orp-0064 OPUNC06G17670.1 Oryza punctata 91 0.0 975
WERAM-Ors-0059 OS06T0583400-01 Oryza sativa 91 0.0 975
WERAM-Orb-0066 OBART06G19560.1 Oryza barthii 91 0.0 973
WERAM-Brd-0020 BRADI1G37290.1 Brachypodium distachyon 89 0.0 971
WERAM-Orgl-0064 OGLUM06G20570.1 Oryza glumaepatula 89 0.0 970
WERAM-Orr-0068 ORUFI06G20660.1 Oryza rufipogon 89 0.0 965
WERAM-Orbr-0074 OB06G27130.1 Oryza brachyantha 91 0.0 956
WERAM-Orni-0065 ONIVA06G23170.1 Oryza nivara 89 0.0 914
WERAM-Ori-0039 BGIOSGA012324-PA Oryza indica 95 0.0 903
WERAM-Zem-0056 GRMZM2G081474_P01 Zea mays 99 0.0 901
WERAM-Orm-0063 OMERI06G19730.1 Oryza meridionalis 89 0.0 895
WERAM-Tra-0318 Traes_7DL_578CF3F0D.2 Triticum aestivum 93 0.0 888
WERAM-Lep-0066 LPERR06G16070.1 Leersia perrieri 90 0.0 886
WERAM-Aet-0051 EMT16627 Aegilops tauschii 81 0.0 834
WERAM-Viv-0012 VIT_03s0038g04240.t01 Vitis vinifera 79 0.0 791
WERAM-Thc-0026 EOX98961 Theobroma cacao 78 0.0 788
WERAM-Sol-0120 Solyc09g091440.2.1 Solanum lycopersicum 78 0.0 774
WERAM-Pot-0112 POPTR_0009s17200.1 Populus trichocarpa 76 0.0 762
WERAM-Sot-0088 PGSC0003DMT400076252 Solanum tuberosum 72 0.0 749
WERAM-Glm-0156 GLYMA13G06010.3 Glycine max 74 0.0 743
WERAM-Prp-0056 EMJ02177 Prunus persica 75 0.0 741
WERAM-Php-0088 PP1S351_29V6.1 Physcomitrella patens 75 0.0 740
WERAM-Arl-0038 fgenesh1_pm.C_scaffold_7000002 Arabidopsis lyrata 76 0.0 738
WERAM-Art-0112 AT4G38130.1 Arabidopsis thaliana 76 0.0 737
WERAM-Met-0084 KEH36404 Medicago truncatula 75 0.0 736
WERAM-Hov-0001 MLOC_10109.1 Hordeum vulgare 95 0.0 732
WERAM-Brr-0202 Bra040131.1-P Brassica rapa 75 0.0 729
WERAM-Amt-0016 ERM94967 Amborella trichopoda 78 0.0 728
WERAM-Bro-0021 Bo1g151980.1 Brassica oleracea 75 0.0 717
WERAM-Mua-0048 GSMUA_Achr2P19590_001 Musa acuminata 67 0.0 699
WERAM-Sem-0132 EFJ35052 Selaginella moellendorffii 83 0.0 693
WERAM-Tru-0006 TRIUR3_03674-P1 Triticum urartu 78 0.0 677
WERAM-Ova-0221 ENSOARP00000022517.1 Ovis aries 70 2e-171 599
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 70 2e-171 599
WERAM-Ran-0062 ENSRNOP00000012854.5 Rattus norvegicus 70 2e-171 599
WERAM-Mum-0093 ENSMUSP00000099657.4 Mus musculus 70 2e-171 599
WERAM-Gaga-0034 ENSGALP00000005212.3 Gallus gallus 70 2e-171 599
WERAM-Hos-0092 ENSP00000362649.3 Homo sapiens 69 3e-171 598
WERAM-Gog-0132 ENSGGOP00000011454.2 Gorilla gorilla 69 3e-171 598
WERAM-Nol-0026 ENSNLEP00000003167.1 Nomascus leucogenys 69 3e-171 598
WERAM-Ocp-0006 ENSOPRP00000000780.1 Ochotona princeps 70 3e-171 598
WERAM-Tag-0022 ENSTGUP00000001473.1 Taeniopygia guttata 70 3e-171 598
WERAM-Otg-0072 ENSOGAP00000005101.2 Otolemur garnettii 69 4e-171 598
WERAM-Cap-0092 ENSCPOP00000006985.2 Cavia porcellus 69 4e-171 598
WERAM-Orc-0030 ENSOCUP00000003186.2 Oryctolagus cuniculus 69 6e-171 597
WERAM-Ptv-0152 ENSPVAP00000012567.1 Pteropus vampyrus 69 1e-170 597
WERAM-Loa-0056 ENSLAFP00000004079.2 Loxodonta africana 69 2e-170 596
WERAM-Mup-0173 ENSMPUP00000015122.1 Mustela putorius furo 69 2e-170 595
WERAM-Anc-0033 ENSACAP00000004062.3 Anolis carolinensis 69 3e-170 595
WERAM-Dan-0175 ENSDNOP00000033349.1 Dasypus novemcinctus 69 8e-170 594
WERAM-Osl-0002 ABO94711 Ostreococcus lucimarinus 71 9e-170 594
WERAM-Drm-0018 FBpp0073173 Drosophila melanogaster 58 1e-169 593
WERAM-Poa-0013 ENSPPYP00000001838.2 Pongo abelii 69 2e-169 593
WERAM-Caf-0116 ENSCAFP00000015619.3 Canis familiaris 69 2e-169 593
WERAM-Myl-0152 ENSMLUP00000012593.2 Myotis lucifugus 69 2e-169 592
WERAM-Org-0090 ORGLA08G0103000.1 Oryza glaberrima 66 2e-169 592
WERAM-Pof-0181 ENSPFOP00000015600.1 Poecilia formosa 65 7e-169 591
WERAM-Tar-0085 ENSTRUP00000016627.1 Takifugu rubripes 68 1e-168 590
WERAM-Orla-0197 ENSORLP00000022529.1 Oryzias latipes 68 1e-168 590
WERAM-Xim-0061 ENSXMAP00000005239.1 Xiphophorus maculatus 63 3e-168 588
WERAM-Tut-0167 ENSTTRP00000014262.1 Tursiops truncatus 59 1e-167 587
WERAM-Pes-0020 ENSPSIP00000004435.1 Pelodiscus sinensis 69 1e-167 587
WERAM-Aim-0087 ENSAMEP00000008076.1 Ailuropoda melanoleuca 69 2e-167 586
WERAM-Cii-0014 ENSCINP00000005410.3 Ciona intestinalis 66 3e-167 585
WERAM-Gaa-0093 ENSGACP00000012045.1 Gasterosteus aculeatus 69 4e-167 585
WERAM-Orn-0087 ENSONIP00000009730.1 Oreochromis niloticus 68 7e-167 584
WERAM-Ten-0109 ENSTNIP00000012136.1 Tetraodon nigroviridis 68 8e-167 584
WERAM-Gam-0033 ENSGMOP00000003469.1 Gadus morhua 69 1e-166 583
WERAM-Dar-0035 ENSDARP00000051798.4 Danio rerio 63 1e-166 583
WERAM-Asm-0120 ENSAMXP00000012237.1 Astyanax mexicanus 63 2e-166 583
WERAM-Leo-0176 ENSLOCP00000020984.1 Lepisosteus oculatus 63 5e-166 581
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 62 1e-165 580
WERAM-Mod-0165 ENSMODP00000022264.3 Monodelphis domestica 59 2e-165 579
WERAM-Chs-0011 ENSCSAP00000016960.1 Chlorocebus sabaeus 68 3e-165 579
WERAM-Fia-0139 ENSFALP00000011453.1 Ficedula albicollis 60 3e-165 579
WERAM-Anp-0136 ENSAPLP00000014652.1 Anas platyrhynchos 68 3e-165 579
WERAM-Paa-0030 ENSPANP00000015145.1 Papio anubis 59 4e-165 578
WERAM-Sus-0201 ENSSSCP00000023024.1 Sus scrofa 69 4e-165 578
WERAM-Pat-0210 ENSPTRP00000060659.1 Pan troglodytes 70 4e-165 578
WERAM-Ict-0111 ENSSTOP00000011457.2 Ictidomys tridecemlineatus 59 5e-165 578
WERAM-Meg-0047 ENSMGAP00000004521.2 Meleagris gallopavo 70 6e-165 578
WERAM-Eqc-0125 ENSECAP00000014039.1 Equus caballus 69 2e-164 576
WERAM-Xet-0037 ENSXETP00000011480.3 Xenopus tropicalis 68 1e-163 573
WERAM-Fec-0156 ENSFCAP00000015379.2 Felis catus 58 5e-160 561
WERAM-Sah-0134 ENSSHAP00000014467.1 Sarcophilus harrisii 59 1e-159 560
WERAM-Ere-0068 ENSEEUP00000005465.1 Erinaceus europaeus 59 1e-159 560
WERAM-Tas-0085 ENSTSYP00000008588.1 Tarsius syrichta 59 2e-157 552
WERAM-Cae-0005 C53A5.3 Caenorhabditis elegans 63 5e-155 545
WERAM-Asn-0024 CADANIAP00005952 Aspergillus nidulans 52 3e-154 542
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 60 7e-154 541
WERAM-Asni-0020 CADANGAP00005938 Aspergillus niger 59 4e-153 538
WERAM-Coi-0024 EAS33504 Coccidioides immitis 60 5e-153 538
WERAM-Prc-0059 ENSPCAP00000005589.1 Procavia capensis 66 8e-153 537
WERAM-Asc-0037 CADACLAP00008612 Aspergillus clavatus 61 1e-152 537
WERAM-Asfu-0015 CADAFUAP00003503 Aspergillus fumigatus 60 1e-152 536
WERAM-Caj-0052 ENSCJAP00000008409.2 Callithrix jacchus 59 4e-152 535
WERAM-Scs-0023 EDO03342 Sclerotinia sclerotiorum 58 5e-152 535
WERAM-Trv-0003 EHK19072 Trichoderma virens 58 6e-152 535
WERAM-Cag-0003 CAG57932 Candida glabrata 58 4e-151 532
WERAM-Map-0015 MAPG_05105T0 Magnaporthe poae 58 5e-151 531
WERAM-Ora-0034 ENSOANP00000005760.2 Ornithorhynchus anatinus 62 7e-151 531
WERAM-Gag-0026 GGTG_08607T0 Gaeumannomyces graminis 60 1e-150 530
Created Date 25-Jun-2016