WERAM - Writers, Erasers & Readers of Histone Acetylation and Methylation Database

Protein
Classification
Domain Profile
Sequence
Orthology
TOP

WERAM Information

Tag

Content

WERAM ID

WERAM-Pot-0060

Ensembl Protein ID

POPTR_0005s06520.1

Gene Name

POPTR_0005s06520g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0005s06520	POPTR_0005s06520.1	POPTR_0005s06520.1

Status

Unreviewed

Classification

Type	Family	E-value	Score	Start	End
HDAC	Class-II	5.00e-91	306.4	64	379
HDAC	Class-I	3.10e-27	97.1	89	346

Organism

Populus trichocarpa

Domain Profile

HDAC Class-II

         class-2.txt  16 leenkekhpEkpeRiqailsrlqeagllek.....leelka.rkatkeelqlvHseehvelletae.klekeelesltvdsdsiylesksi 99 
                         + +n+e hpE+  R+ ai+s+l++a+l++k     + el+  + a+++++++vH +++v  le+a+ +++++ +      s+ +y++ +++
  POPTR_0005s06520.1  64 MGHNQEAHPESYLRVPAIVSALEKAELTSKfrgseIIELQDfKPASLDDIANVHARAYVAGLEKAMdQASEQGII-YIDGSGPTYATATTF 153
                         5678899*********************9544444777777699*********************9555666555.7999*********** PP
         class-2.txt 100 kaarlavGavlelvdkvlkgel..kn...gfavvRPPGHHaeestamGFClfnnvavaakllqqklkvkkilivDwDvHhGnGtqeifykd 185
                         + + +a+Ga l+lvd+v++++   +n   gfa++RPPGHHa ++ +mGFC+f nva+aa+++q  + +k+++i+D+DvHhGnGt+++f +d
  POPTR_0005s06520.1 154 RESLVAAGAGLTLVDSVVAASNcsQNpptGFALIRPPGHHAIPKGPMGFCVFGNVAIAARHAQLVHGLKRVFIIDFDVHHGNGTNDAFFDD 244
                         *****************999865555889************************************************************** PP
         class-2.txt 186 pkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaegdplgglsv 276
                         p++ +lS+H  ++gs +p  g+g++de+g+g+geg+++N++++gg+ gd  ++++f+ev++p a++FkPd++lvsaG+Da+  dplg+l++
  POPTR_0005s06520.1 245 PDIYFLSTH--QDGS-YP--GTGKIDEIGHGDGEGTTLNLPLPGGS-GDISMRTVFDEVIVPSAQRFKPDIILVSAGYDAHVLDPLGSLQF 329
                         *********..9***.78..8***********************99.******************************************** PP
         class-2.txt 277 takcyatltkqllkl....aggrvvlvlEGGynlkaiaeaveavvkaLlg 322
                         t+ +y tl+ ++++l    +ggr+v++lEGGynl++++++v+ +++a lg
  POPTR_0005s06520.1 330 TTGTYYTLASNIKELakdlCGGRCVFFLEGGYNLDSLSYSVTDSFRAFLG 379
                         **********999998888************************9999875 PP

HDAC Class-I

         class-1.txt  32 eLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdglfey..cqlitGasleaakkLnkke 120
                         eL  ++  s+ +e+   k as ++++++h+ +y+  l+k   + +e+ +       ++   P +     +  + + +Ga l+ ++ +    
  POPTR_0005s06520.1  89 ELTSKFRGSEIIELQDFKPASLDDIANVHARAYVAGLEKAMDQASEQGI-----IYIDGSGPTYATATTFreSLVAAGAGLTLVDSVVAA- 173
                         5667777788888888899999999999999999999987666555444.....558889998877766622557889988877776543. PP
         class-1.txt 121 adiainwaGGl.......hhakkseasGfcyvnDivlail..ellkkhkrvlyididlhhGDgveeafyttdrvmtvsfhkygeeffPgtG 202
                         ++ + n   G+       hha  +   Gfc   ++ +a    +l + +krv  id+d+hhG+g ++af     +  +s h+ g   +PgtG
  POPTR_0005s06520.1 174 SNCSQNPPTGFalirppgHHAIPKGPMGFCVFGNVAIAARhaQLVHGLKRVFIIDFDVHHGNGTNDAFFDDPDIYFLSTHQDGS--YPGTG 262
                         3344444444223333339****************9998522789999********************************9998..9**** PP
         class-1.txt 203 dlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksfnl 286
                         +++++g+++g   ++n+Pl  g  D s++++f +vi +  ++f+P+++++  G D+   D+lg+ ++++ ++ +  + +k+   
  POPTR_0005s06520.1 263 KIDEIGHGDGEGTTLNLPLPGGSGDISMRTVFDEVIVPSAQRFKPDIILVSAGYDAHVLDPLGSLQFTTGTYYTLASNIKELAK 346
                         *******************************************************************99877666666665544 PP

Protein Sequence
(Fasta)

MELQTFRLPY FAGCRYFQRR SILRRQFCTK RSGFSISCSY SLDKDPLIEK LTDARVIYSV 60
APAMGHNQEA HPESYLRVPA IVSALEKAEL TSKFRGSEII ELQDFKPASL DDIANVHARA 120
YVAGLEKAMD QASEQGIIYI DGSGPTYATA TTFRESLVAA GAGLTLVDSV VAASNCSQNP 180
PTGFALIRPP GHHAIPKGPM GFCVFGNVAI AARHAQLVHG LKRVFIIDFD VHHGNGTNDA 240
FFDDPDIYFL STHQDGSYPG TGKIDEIGHG DGEGTTLNLP LPGGSGDISM RTVFDEVIVP 300
SAQRFKPDII LVSAGYDAHV LDPLGSLQFT TGTYYTLASN IKELAKDLCG GRCVFFLEGG 360
YNLDSLSYSV TDSFRAFLGE KSLASEFDNP AILYEEPSTK VKQAIQRVKH IHSL 414

Nucleotide Sequence
(Fasta)

AAAAAGACAT ACAAAATATT ACAGGTTTGA GCGCCACAAG CTCACTTATC CACCTCAATG 60
GAGCTTCAAA CTTTCCGCCT TCCATATTTT GCAGGGTGCA GATATTTTCA GAGGCGTTCG 120
ATTTTGCGAA GGCAGTTCTG CACAAAGCGC AGTGGATTTT CTATTTCTTG CTCATATAGT 180
TTAGACAAGG ATCCACTGAT TGAAAAGTTA ACTGATGCAC GAGTAATTTA TAGTGTTGCG 240
CCTGCCATGG GTCATAACCA GGAGGCACAT CCCGAATCCT ATCTTAGAGT TCCTGCAATC 300
GTGAGTGCTC TTGAAAAGGC AGAACTCACA TCAAAGTTTC GTGGTTCTGA GATCATTGAA 360
CTTCAAGATT TCAAGCCTGC TTCACTGGAT GACATTGCAA ATGTTCATGC CAGAGCTTAT 420
GTAGCAGGCC TTGAGAAGGC TATGGATCAA GCTTCAGAAC AGGGCATTAT TTATATCGAT 480
GGGTCTGGAC CAACATATGC TACTGCCACT ACGTTCCGGG AGTCACTTGT GGCAGCTGGA 540
GCAGGACTAA CCTTGGTCGA TTCAGTGGTT GCAGCATCTA ATTGCAGCCA GAATCCACCT 600
ACAGGATTTG CTTTGATCAG ACCTCCTGGG CATCATGCTA TTCCAAAAGG GCCTATGGGC 660
TTTTGTGTTT TTGGCAATGT GGCCATTGCA GCTCGTCATG CTCAACTAGT GCATGGATTA 720
AAACGAGTCT TTATCATTGA TTTTGATGTT CACCATGGGA ATGGGACGAA TGATGCATTT 780
TTTGATGATC CAGATATATA CTTCCTGTCC ACTCACCAAG ATGGAAGCTA TCCAGGTACT 840
GGTAAAATTG ACGAGATAGG TCATGGAGAT GGTGAAGGTA CAACTTTAAA TCTGCCTCTA 900
CCAGGAGGCT CAGGTGACAT TTCCATGAGG ACTGTGTTTG ATGAAGTCAT CGTACCAAGT 960
GCTCAAAGGT TCAAGCCAGA TATTATTCTT GTTTCTGCTG GGTATGATGC TCATGTTCTG 1020
GATCCACTGG GGAGTCTTCA ATTTACAACA GGAACATACT ACACGCTTGC CTCTAATATT 1080
AAGGAACTGG CAAAAGATCT ATGTGGTGGC CGATGCGTGT TTTTCTTGGA GGGAGGATAC 1140
AACCTCGATT CTCTTTCTTA TTCAGTAACG GACTCCTTTC GAGCTTTCCT CGGTGAGAAG 1200
AGTTTGGCAT CTGAGTTTGA TAACCCTGCC ATCTTGTACG AAGAACCATC AACAAAGGTG 1260
AAGCAAGCGA TCCAGAGAGT TAAACACATA CATTCCCTCT GAGGATCGAT GTCTCATCAT 1320
TACAAGAGTG TCTCGAAGTA GCCTTGCTGC TCACTAGTAA GCTATTTTCA GCATATTCTG 1380
TAATCACCGC AGTCTGAAAA AACCTGCTAC TGTTCTTGTA TAGTATCATC TTAACATGTA 1440
TAGGCCTTCA GTGATAAGAT TGTCGATTAC TGACATTAGC TGGTAAAATT ACACTGTTCT 1500
GAAAAAAGAT TATGCTTCAT ATTTAGATGA ATGCATTTTC CCATCGAATT TCTTTCAAGA 1560
TATGGAAAGA TGGGAAAATG TGATTATTGA TTT 1594

Sequence Source

Ensembl

Orthology

WERAM ID	Ensembl Protein ID	Species	Identity	E-value	Score
WERAM-Viv-0021	VIT_04s0044g01510.t01	Vitis vinifera	81	0.0	676
WERAM-Met-0183	AET04758	Medicago truncatula	78	0.0	644
WERAM-Glm-0050	GLYMA05G32600.1	Glycine max	76	0.0	644
WERAM-Bro-0004	Bo1g008110.1	Brassica oleracea	74	2e-179	626
WERAM-Art-0110	AT4G33470.1	Arabidopsis thaliana	71	2e-178	622
WERAM-Arl-0142	scaffold_700814.1	Arabidopsis lyrata	75	6e-178	620
WERAM-Brr-0061	Bra011444.1-P	Brassica rapa	73	6e-178	620
WERAM-Prp-0071	EMJ12704	Prunus persica	82	7e-175	610
WERAM-Mua-0145	GSMUA_AchrUn_randomP00520_001	Musa acuminata	65	1e-171	599
WERAM-Brd-0117	BRADI4G40960.1	Brachypodium distachyon	75	2e-167	585
WERAM-Tra-0217	Traes_5BS_F36388166.1	Triticum aestivum	71	6e-167	584
WERAM-Orp-0110	OPUNC12G04860.1	Oryza punctata	72	8e-167	583
WERAM-Orb-0120	OBART12G04910.1	Oryza barthii	71	2e-166	582
WERAM-Orni-0103	ONIVA09G16260.1	Oryza nivara	70	9e-166	580
WERAM-Org-0113	ORGLA12G0047100.1	Oryza glaberrima	71	9e-166	580
WERAM-Zem-0142	GRMZM2G456473_P01	Zea mays	66	1e-165	579
WERAM-Sob-0054	Sb03g038950.1	Sorghum bicolor	74	2e-165	579
WERAM-Ors-0108	OS12T0182700-01	Oryza sativa	71	2e-165	578
WERAM-Sei-0036	Si010171m	Setaria italica	64	3e-165	578
WERAM-Ori-0128	BGIOSGA037104-PA	Oryza indica	71	4e-165	578
WERAM-Lep-0114	LPERR12G04530.1	Leersia perrieri	73	4e-164	574
WERAM-Orbr-0123	OB12G14780.1	Oryza brachyantha	72	4e-163	571
WERAM-Orl-0008	KN538685.1_FGP052	Oryza longistaminata	67	4e-162	568
WERAM-Orgl-0115	OGLUM12G05720.1	Oryza glumaepatula	67	5e-162	567
WERAM-Orr-0120	ORUFI12G05690.1	Oryza rufipogon	67	1e-161	566
WERAM-Orm-0105	OMERI12G03370.1	Oryza meridionalis	64	4e-160	561
WERAM-Php-0127	PP1S85_154V6.1	Physcomitrella patens	66	1e-159	559
WERAM-Amt-0065	ERN18144	Amborella trichopoda	71	6e-157	551
WERAM-Tru-0036	TRIUR3_18154-P1	Triticum urartu	67	3e-150	528
WERAM-Thc-0007	EOX92582	Theobroma cacao	89	6e-131	464
WERAM-Sem-0047	EFJ16002	Selaginella moellendorffii	62	6e-128	454
WERAM-Sol-0006	Solyc01g009110.2.1	Solanum lycopersicum	81	4e-127	452
WERAM-Osl-0036	ABP01312	Ostreococcus lucimarinus	49	8e-96	348
WERAM-Chr-0006	EDP01653	Chlamydomonas reinhardtii	52	3e-53	206
WERAM-Spr-0021	CBQ72644	Sporisorium reilianum	35	2e-47	187
WERAM-Aim-0036	ENSAMEP00000002564.1	Ailuropoda melanoleuca	39	4e-47	186
WERAM-Caf-0004	ENSCAFP00000000979.4	Canis familiaris	35	7e-47	185
WERAM-Myl-0003	ENSMLUP00000000417.2	Myotis lucifugus	40	1e-46	184
WERAM-Tut-0141	ENSTTRP00000011664.1	Tursiops truncatus	36	2e-46	184
WERAM-Mup-0023	ENSMPUP00000002307.1	Mustela putorius furo	34	2e-46	183
WERAM-Eqc-0086	ENSECAP00000010704.1	Equus caballus	36	5e-46	182
WERAM-Pof-0042	ENSPFOP00000003781.2	Poecilia formosa	34	6e-46	182
WERAM-Cap-0164	ENSCPOP00000013386.2	Cavia porcellus	36	7e-46	182
WERAM-Ten-0099	ENSTNIP00000000138.1	Tetraodon nigroviridis	34	7e-46	182
WERAM-Sus-0012	ENSSSCP00000001039.2	Sus scrofa	35	8e-46	181
WERAM-Mum-0213	ENSMUSP00000080832.5	Mus musculus	36	2e-45	181
WERAM-Orn-0049	ENSONIP00000005635.1	Oreochromis niloticus	34	2e-45	181
WERAM-Ict-0132	ENSSTOP00000013675.2	Ictidomys tridecemlineatus	37	2e-45	180
WERAM-Drm-0028	FBpp0290988	Drosophila melanogaster	33	3e-45	180
WERAM-Bot-0106	ENSBTAP00000014602.4	Bos taurus	37	4e-45	179
WERAM-Asn-0017	CADANIAP00004063	Aspergillus nidulans	34	5e-45	179
WERAM-Crn-0010	AAW42071	Cryptococcus neoformans	35	5e-45	179
WERAM-Tar-0171	ENSTRUP00000035900.1	Takifugu rubripes	34	7e-45	179
WERAM-Dar-0198	ENSDARP00000131327.1	Danio rerio	34	7e-45	179
WERAM-Cae-0060	F41H10.6b	Caenorhabditis elegans	36	7e-45	178
WERAM-Cag-0018	CAG60803	Candida glabrata	31	8e-45	178
WERAM-Fec-0119	ENSFCAP00000011049.3	Felis catus	34	1e-44	178
WERAM-Gaa-0020	ENSGACP00000002894.1	Gasterosteus aculeatus	34	1e-44	177
WERAM-Xet-0035	ENSXETP00000010592.2	Xenopus tropicalis	33	1e-44	177
WERAM-Xim-0085	ENSXMAP00000008038.1	Xiphophorus maculatus	34	2e-44	177
WERAM-Ere-0078	ENSEEUP00000006690.1	Erinaceus europaeus	34	2e-44	177
WERAM-Ran-0201	ENSRNOP00000063689.2	Rattus norvegicus	33	2e-44	177
WERAM-Pat-0122	ENSPTRP00000025053.4	Pan troglodytes	35	2e-44	177
WERAM-Anc-0037	ENSACAP00000004435.3	Anolis carolinensis	33	2e-44	177
WERAM-Sah-0095	ENSSHAP00000011018.1	Sarcophilus harrisii	34	3e-44	176
WERAM-Gog-0159	ENSGGOP00000014095.2	Gorilla gorilla	35	3e-44	176
WERAM-Otg-0149	ENSOGAP00000012689.2	Otolemur garnettii	34	3e-44	176
WERAM-Paa-0009	ENSPANP00000013655.1	Papio anubis	37	4e-44	176
WERAM-Hos-0058	ENSP00000216271.5	Homo sapiens	37	4e-44	176
WERAM-Nol-0005	ENSNLEP00000000692.2	Nomascus leucogenys	35	8e-44	175
WERAM-Sac-0037	YNL021W	Saccharomyces cerevisiae	30	1e-43	174
WERAM-Ect-0100	ENSETEP00000011415.1	Echinops telfairi	39	1e-43	174
WERAM-Chs-0051	ENSCSAP00000001305.1	Chlorocebus sabaeus	35	1e-43	174
WERAM-Leo-0082	ENSLOCP00000011105.1	Lepisosteus oculatus	33	2e-43	174
WERAM-Scj-0031	EEB08679	Schizosaccharomyces japonicus	34	2e-43	173
WERAM-Coi-0028	EAS30926	Coccidioides immitis	34	2e-43	173
WERAM-Orla-0199	ENSORLP00000022663.1	Oryzias latipes	32	3e-43	173
WERAM-Ast-0014	CADATEAP00005667	Aspergillus terreus	33	3e-43	173
WERAM-Asm-0202	ENSAMXP00000018862.1	Astyanax mexicanus	34	4e-43	172
WERAM-Ora-0108	ENSOANP00000020481.2	Ornithorhynchus anatinus	32	6e-43	172
WERAM-Asc-0002	CADACLAP00000048	Aspergillus clavatus	33	9e-43	171
WERAM-Pug-0031	EFP89333	Puccinia graminis	31	9e-43	171
WERAM-Lac-0157	ENSLACP00000018610.1	Latimeria chalumnae	36	1e-42	171
WERAM-Pem-0058	ENSPMAP00000006830.1	Petromyzon marinus	33	1e-42	171
WERAM-Orc-0102	ENSOCUP00000008741.3	Oryctolagus cuniculus	34	1e-42	171
WERAM-Mae-0029	ENSMEUP00000002095.1	Macropus eugenii	36	1e-42	171
WERAM-Caa-0034	KGT64501	Candida albicans	31	2e-42	171
WERAM-Map-0033	MAPG_10880T0	Magnaporthe poae	33	2e-42	170
WERAM-Mel-0037	EGG03660	Melampsora laricipopulina	32	2e-42	170
WERAM-Hov-0018	MLOC_16422.1	Hordeum vulgare	35	3e-42	170
WERAM-Loa-0107	ENSLAFP00000009167.2	Loxodonta africana	33	3e-42	170
WERAM-Fia-0119	ENSFALP00000010264.1	Ficedula albicollis	33	3e-42	169
WERAM-Pes-0126	ENSPSIP00000015149.1	Pelodiscus sinensis	32	3e-42	169
WERAM-Kop-0012	CAY68916	Komagataella pastoris	31	4e-42	169
WERAM-Mod-0081	ENSMODP00000012731.2	Monodelphis domestica	34	5e-42	169
WERAM-Kll-0020	CAG99415	Kluyveromyces lactis	31	5e-42	169
WERAM-Yal-0023	CAG79971	Yarrowia lipolytica	34	5e-42	169
WERAM-Gag-0014	GGTG_04308T0	Gaeumannomyces graminis	33	5e-42	169
WERAM-Meg-0023	ENSMGAP00000001752.2	Meleagris gallopavo	32	6e-42	169
WERAM-Gaga-0049	ENSGALP00000033098.3	Gallus gallus	32	6e-42	169
WERAM-Anp-0022	ENSAPLP00000003127.1	Anas platyrhynchos	37	6e-42	169
WERAM-Usm-0012	UM02102P0	Ustilago maydis	34	9e-42	168
WERAM-Poa-0162	ENSPPYP00000019901.2	Pongo abelii	33	1e-41	168
WERAM-Chg-0033	EAQ86725	Chaetomium globosum	32	1e-41	168
WERAM-Mam-0095	ENSMMUP00000014626.2	Macaca mulatta	33	1e-41	167
WERAM-Scp-0036	SPBC800.03.1:pep	Schizosaccharomyces pombe	33	1e-41	167
WERAM-Ptv-0156	ENSPVAP00000012934.1	Pteropus vampyrus	32	1e-41	167
WERAM-Caj-0009	ENSCJAP00000001947.2	Callithrix jacchus	32	2e-41	167
WERAM-Tag-0050	ENSTGUP00000003338.1	Taeniopygia guttata	32	2e-41	167
WERAM-Asg-0010	AAS51704	Ashbya gossypii	32	2e-41	167
WERAM-Tas-0117	ENSTSYP00000012457.1	Tarsius syrichta	32	3e-41	166
WERAM-Ocp-0057	ENSOPRP00000005096.1	Ochotona princeps	34	4e-41	166
WERAM-Mao-0002	MGG_01076T0	Magnaporthe oryzae	34	4e-41	166
WERAM-Gam-0051	ENSGMOP00000005244.1	Gadus morhua	35	5e-41	166
WERAM-Dio-0075	ENSDORP00000007462.1	Dipodomys ordii	33	6e-41	165

Created Date

25-Jun-2016

WERAM Information

Protein Fasta Sequence

Nucleotide Fasta Sequence