WERAM Information

Tag Content
WERAM ID WERAM-Orb-0005
Ensembl Protein ID OBART01G20930.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
OBART01G20930 OBART01G20930.1 OBART01G20930.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 1.20e-122 410.4 20 346
Organism Oryza barthii
Domain Profile
  HDAC Class-I
      class-1.txt   1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenae......elskelkkfnv 88 
                      ++v+y+yd+ ++++ yg++h+m+p+r++++h+Lv +yg+  +++++++  a+a+el+ fh e y+ +l+  +p+         ++++    ++v
  OBART01G20930.1  20 RRVCYYYDPGISTVDYGEGHVMVPHRVTMAHNLVAAYGMLGDMRRLRTAPATAAELADFHDEGYLALLQDLTPDGCGgddgvgDTARARGIYAV 113
                      589**********************************************************************998767777755556666777 PP
      class-1.txt  89 ge.......dcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgv 175
                      +        d Pvfd l++yc  ++G+sl+aa+ L +++adiainw+GG+hha +  a GfcyvnDivlai ell +++rvly+did+hhGDgv
  OBART01G20930.1 114 EGkgggrgvDNPVFDRLWDYCLRYSGGSLAAARALGSGTADIAINWSGGMHHACRGGARGFCYVNDIVLAIRELLAHFRRVLYVDIDVHHGDGV 207
                      5434444559************************************************************************************ PP
      class-1.txt 176 eeafyttdrvmtvsfhkygeeffPgtGdlsdvga.ekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefn 268
                      + af++++rvmtvsfh++g +ffPg+G + dvg+ + g+y a+nvP++ gi De+y+++f++++ +v+e+f+PeavvlqcGaDslagDrlge n
  OBART01G20930.1 208 QAAFEASNRVMTVSFHQHGGGFFPGSGAVADVGKkGPGRYCALNVPVSVGIGDEEYHRLFEPIMARVMEVFQPEAVVLQCGADSLAGDRLGELN 301
                      ********************************97268********************************************************* PP
      class-1.txt 269 lsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
                      l+++gha+cv+f++sfnlpll+lGGGGYt++ va cw+ etav++
  OBART01G20930.1 302 LTTRGHAQCVSFIRSFNLPLLLLGGGGYTINHVASCWCNETAVAI 346
                      ******************************************975 PP
Protein Sequence
(Fasta)		MAGGGGNSLP SPSCGDDKKR RVCYYYDPGI STVDYGEGHV MVPHRVTMAH NLVAAYGMLG 60
DMRRLRTAPA TAAELADFHD EGYLALLQDL TPDGCGGDDG VGDTARARGI YAVEGKGGGR 120
GVDNPVFDRL WDYCLRYSGG SLAAARALGS GTADIAINWS GGMHHACRGG ARGFCYVNDI 180
VLAIRELLAH FRRVLYVDID VHHGDGVQAA FEASNRVMTV SFHQHGGGFF PGSGAVADVG 240
KKGPGRYCAL NVPVSVGIGD EEYHRLFEPI MARVMEVFQP EAVVLQCGAD SLAGDRLGEL 300
NLTTRGHAQC VSFIRSFNLP LLLLGGGGYT INHVASCWCN ETAVAIGKEI PDDIPKHGFD 360
VFYKNQEYKL HYKLQTKHLH RNRNTANSID GIRMAAMENL SKLKLEAAAS VQFEERRHRS 420
IDVGDLYYDP REQEEEEESP MARLHRKLYF EPTGDQESLY TKHRAGGFTK PSASTPATSW 480
TAACASIAEL PSQGRWLSLA LFTKPYASTP ATSWTAACAS IAELPDIGHL TFSGYGLTAI 540
GLVIFVILLG DNLDKLLPGT VVEILGYQVH GKQLFVLAAA TVILPTTWLK NLSVLAYLGG 600
QAGLVGCAER VAHRPQPLLR LLRRLWRLPD RLLLNEVQEG FSYTLLKCIY VLYLIVLLIS 660
SVMCSLNYTV TTVLGYLSYG EDVQVKVTLN LPTGKLYTKI TILTTLITPL AKYTLVIQPI 720
TMAIEDKLSA TMAAVADNRN NGLTRVLTSS RRCQHDGAGV HFALLRLPHV VHRVLAERRR 780
CHVVPVPELP QDLHAPRRSC PLRGGGDRWD TGHWSVHHHH WHLHLPSPDY RHILIGHLWV 840
WWRPTSLHDR GRDSDDDDFR DRDYDVAALA NNLSQAFRYV IYNNDDMEEN QGTLERDDEV 900
LF 902
Nucleotide Sequence
(Fasta)		ATGGCCGGCG GCGGCGGCAA TTCGCTGCCT TCGCCGTCGT GCGGCGACGA CAAGAAGCGG 60
CGGGTGTGCT ACTACTACGA CCCGGGGATC TCCACCGTCG ACTACGGCGA GGGCCACGTC 120
ATGGTGCCGC ACCGCGTCAC CATGGCGCAC AACCTCGTCG CCGCCTACGG CATGCTCGGC 180
GACATGCGCC GCCTCCGCAC GGCGCCCGCC ACGGCGGCGG AGCTCGCCGA CTTCCACGAC 240
GAGGGCTACC TCGCCCTCCT CCAGGACCTC ACCCCGGACG GCTGCGGAGG CGACGACGGG 300
GTCGGCGACA CGGCGCGCGC CAGGGGCATC TACGCCGTCG AGGGCAAGGG CGGCGGCCGC 360
GGCGTCGACA ACCCGGTGTT CGACCGCCTC TGGGATTACT GCCTCCGCTA CTCCGGCGGG 420
TCGCTCGCCG CGGCGCGCGC CCTCGGGAGC GGCACCGCCG ACATCGCCAT CAACTGGTCG 480
GGCGGGATGC ACCACGCGTG CCGCGGCGGC GCGAGGGGCT TCTGCTACGT GAACGACATC 540
GTGCTCGCCA TCCGCGAGCT GCTCGCCCAC TTCCGCCGCG TGCTCTACGT GGACATCGAC 600
GTCCACCACG GCGACGGCGT CCAGGCCGCC TTCGAGGCGT CGAACCGGGT GATGACGGTG 660
TCGTTCCACC AGCACGGCGG CGGCTTCTTC CCGGGCTCCG GCGCCGTCGC CGACGTCGGC 720
AAGAAGGGCC CCGGCCGCTA CTGCGCGCTG AACGTGCCGG TGAGCGTGGG CATCGGCGAC 780
GAGGAGTACC ACCGGCTGTT CGAGCCGATC ATGGCGAGGG TGATGGAGGT GTTCCAGCCG 840
GAGGCCGTCG TGCTGCAGTG CGGCGCCGAC TCCCTCGCCG GCGACCGGCT CGGCGAGCTG 900
AACCTGACCA CGCGCGGCCA CGCCCAGTGC GTCAGCTTCA TCCGCAGCTT CAACCTGCCG 960
CTCCTCCTCC TCGGCGGCGG CGGCTACACC ATCAACCACG TCGCCTCCTG CTGGTGCAAT 1020
GAGACGGCGG TGGCCATCGG CAAGGAAATC CCCGACGACA TACCCAAGCA TGGTTTCGAC 1080
GTGTTTTACA AGAACCAGGA GTACAAGCTC CATTACAAGT TGCAGACGAA GCACCTGCAC 1140
CGCAACCGCA ACACGGCGAA CTCCATAGAC GGCATCAGGA TGGCGGCCAT GGAGAACCTC 1200
TCCAAACTGA AGCTGGAGGC GGCGGCGAGC GTGCAGTTCG AGGAGCGCCG CCACCGGAGC 1260
ATCGACGTCG GCGACCTCTA CTACGACCCA CGCGAGCAGG AAGAGGAAGA GGAGAGCCCC 1320
ATGGCGAGGC TGCACCGGAA GCTCTACTTC GAGCCCACCG GAGATCAGGA GAGCCTCTAC 1380
ACTAAGCACA GGGCAGGTGG CTTCACCAAG CCATCTGCTT CTACACCGGC AACCTCATGG 1440
ACCGCTGCAT GCGCGTCGAT CGCTGAGCTA CCCTCGCAGG GCAGGTGGCT CAGCCTGGCG 1500
CTCTTCACCA AGCCATATGC TTCTACACCA GCAACCTCAT GGACCGCTGC ATGCGCGTCG 1560
ATCGCTGAGC TACCGGACAT CGGCCACCTC ACCTTCAGCG GCTATGGCCT GACGGCCATC 1620
GGCCTCGTCA TCTTCGTCAT CCTCTTGGGC GACAACCTCG ACAAGCTCCT CCCTGGCACG 1680
GTGGTGGAGA TCCTAGGGTA CCAGGTGCAT GGGAAGCAGC TGTTCGTGCT CGCGGCGGCC 1740
ACTGTCATCC TCCCGACGAC GTGGCTCAAG AACCTCAGCG TGCTTGCCTA TCTCGGCGGT 1800
CAGGCTGGTC TTGTCGGTTG CGCTGAGCGG GTTGCCCACC GCCCTCAGCC TCTACTTCGT 1860
CTGCTTCGTC GGCTATGGCG TCTTCCCGAC CGTTTACTGC TCAATGAAGT CCAAGAAGGA 1920
TTTTCCTATA CACTTTTAAA ATGTATTTAT GTGTTGTACT TGATAGTTTT GCTAATCTCT 1980
TCGGTGATGT GCAGTCTCAA CTATACAGTG ACAACAGTGT TGGGATATCT GAGCTATGGT 2040
GAGGATGTGC AGGTGAAGGT GACACTGAAC TTACCCACGG GGAAGCTGTA CACCAAGATC 2100
ACCATCTTGA CGACACTGAT CACCCCGCTA GCGAAGTACA CGCTCGTGAT CCAGCCCATC 2160
ACAATGGCGA TAGAGGACAA GCTGTCGGCA ACGATGGCGG CGGTGGCGGA CAATAGGAAC 2220
AACGGGCTAA CCAGGGTGCT CACTAGCAGC CGTCGTTGTC AGCATGATGG TGCTGGCGTG 2280
CACTTTGCCC TTCTTCGGCT ACCTCATGTT GTTCATCGGG TCCTCGCTGA ACGTCGTCGT 2340
TGCCATGTTG TTCCCGTGCC TGAGCTACCT CAAGATCTAC ATGCCCCGAG GAGGAGTTGT 2400
CCGCTTCGAG GTGGTGGCGA TCGTTGGGAT ACTGGTCATT GGAGTGTGCA TCACCATCAT 2460
TGGCACCTAC ACCTCCCTTC ACCAGATTAT CGGCACATTT TGATCGGGCA TTTGTGGGTA 2520
TGGTGGCGCC CAACATCACT TCATGACCGT GGTAGGGATA GTGATGATGA TGACTTCCGA 2580
GACAGGGATT ATGATGTGGC AGCTCTTGCT AATAACTTGA GCCAGGCATT CCGATATGTG 2640
ATATATAACA ATGATGATAT GGAAGAGAAT CAAGGGACAC TTGAACGGGA TGATGAGGTA 2700
CTTTTTTGA
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orni-0005 ONIVA01G23540.1 Oryza nivara 98 0.0 860
WERAM-Orgl-0006 OGLUM01G24610.1 Oryza glumaepatula 98 0.0 857
WERAM-Orr-0006 ORUFI01G23650.1 Oryza rufipogon 95 0.0 834
WERAM-Orm-0006 OMERI01G19130.1 Oryza meridionalis 94 0.0 833
WERAM-Orp-0006 OPUNC01G21000.1 Oryza punctata 86 0.0 706
WERAM-Ori-0005 BGIOSGA001330-PA Oryza indica 99 5e-180 629
WERAM-Lep-0007 LPERR01G17850.1 Leersia perrieri 68 3e-159 560
WERAM-Orbr-0007 OB01G30550.1 Oryza brachyantha 67 2e-154 544
WERAM-Sob-0048 Sb03g026250.1 Sorghum bicolor 58 1e-132 471
WERAM-Orl-0006 KN538683.1_FGP175 Oryza longistaminata 60 2e-130 464
WERAM-Brd-0084 BRADI3G44780.1 Brachypodium distachyon 59 2e-130 464
WERAM-Ors-0100 OS11T0200000-01 Oryza sativa 58 8e-129 459
WERAM-Aet-0080 EMT05969 Aegilops tauschii 65 2e-122 437
WERAM-Sei-0017 Si004835m Setaria italica 56 4e-115 413
WERAM-Tra-0253 Traes_6AS_5CF7CCD9E.1 Triticum aestivum 53 1e-106 385
WERAM-Hov-0099 MLOC_71091.1 Hordeum vulgare 53 3e-104 377
WERAM-Glm-0156 GLYMA13G06010.3 Glycine max 51 4e-103 373
WERAM-Zem-0099 GRMZM2G172883_P01 Zea mays 52 4e-103 373
WERAM-Met-0084 KEH36404 Medicago truncatula 51 5e-103 373
WERAM-Php-0050 PP1S223_52V6.1 Physcomitrella patens 51 1e-102 372
WERAM-Thc-0026 EOX98961 Theobroma cacao 48 3e-102 370
WERAM-Bro-0021 Bo1g151980.1 Brassica oleracea 51 3e-102 370
WERAM-Brr-0202 Bra040131.1-P Brassica rapa 51 5e-102 370
WERAM-Sot-0088 PGSC0003DMT400076252 Solanum tuberosum 52 7e-102 369
WERAM-Art-0112 AT4G38130.1 Arabidopsis thaliana 51 7e-102 369
WERAM-Arl-0038 fgenesh1_pm.C_scaffold_7000002 Arabidopsis lyrata 51 9e-102 369
WERAM-Pot-0112 POPTR_0009s17200.1 Populus trichocarpa 50 2e-101 368
WERAM-Sol-0120 Solyc09g091440.2.1 Solanum lycopersicum 51 2e-101 367
WERAM-Viv-0012 VIT_03s0038g04240.t01 Vitis vinifera 51 2e-101 367
WERAM-Amt-0016 ERM94967 Amborella trichopoda 51 1e-100 365
WERAM-Prp-0056 EMJ02177 Prunus persica 51 1e-99 362
WERAM-Sem-0132 EFJ35052 Selaginella moellendorffii 51 3e-99 360
WERAM-Mua-0114 GSMUA_Achr8P04190_001 Musa acuminata 49 2e-95 347
WERAM-Org-0090 ORGLA08G0103000.1 Oryza glaberrima 49 1e-94 345
WERAM-Mum-0093 ENSMUSP00000099657.4 Mus musculus 47 2e-94 344
WERAM-Ova-0221 ENSOARP00000022517.1 Ovis aries 47 2e-94 344
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 47 2e-94 344
WERAM-Ran-0062 ENSRNOP00000012854.5 Rattus norvegicus 47 2e-94 344
WERAM-Anc-0033 ENSACAP00000004062.3 Anolis carolinensis 47 2e-94 344
WERAM-Ocp-0006 ENSOPRP00000000780.1 Ochotona princeps 47 3e-94 344
WERAM-Cap-0092 ENSCPOP00000006985.2 Cavia porcellus 47 4e-94 343
WERAM-Poa-0013 ENSPPYP00000001838.2 Pongo abelii 47 4e-94 343
WERAM-Otg-0072 ENSOGAP00000005101.2 Otolemur garnettii 47 5e-94 343
WERAM-Orn-0136 ENSONIP00000014285.1 Oreochromis niloticus 49 5e-94 343
WERAM-Xim-0061 ENSXMAP00000005239.1 Xiphophorus maculatus 49 5e-94 343
WERAM-Nol-0026 ENSNLEP00000003167.1 Nomascus leucogenys 47 6e-94 343
WERAM-Hos-0092 ENSP00000362649.3 Homo sapiens 47 6e-94 343
WERAM-Gog-0132 ENSGGOP00000011454.2 Gorilla gorilla 47 6e-94 343
WERAM-Orc-0030 ENSOCUP00000003186.2 Oryctolagus cuniculus 47 6e-94 343
WERAM-Gaga-0034 ENSGALP00000005212.3 Gallus gallus 47 7e-94 343
WERAM-Tar-0085 ENSTRUP00000016627.1 Takifugu rubripes 48 7e-94 342
WERAM-Tag-0022 ENSTGUP00000001473.1 Taeniopygia guttata 47 8e-94 342
WERAM-Asm-0151 ENSAMXP00000014739.1 Astyanax mexicanus 48 1e-93 342
WERAM-Pof-0181 ENSPFOP00000015600.1 Poecilia formosa 47 1e-93 342
WERAM-Mup-0173 ENSMPUP00000015122.1 Mustela putorius furo 47 1e-93 342
WERAM-Orla-0197 ENSORLP00000022529.1 Oryzias latipes 48 2e-93 341
WERAM-Ptv-0152 ENSPVAP00000012567.1 Pteropus vampyrus 47 2e-93 341
WERAM-Xet-0037 ENSXETP00000011480.3 Xenopus tropicalis 48 5e-93 340
WERAM-Loa-0056 ENSLAFP00000004079.2 Loxodonta africana 46 6e-93 340
WERAM-Ten-0060 ENSTNIP00000007837.1 Tetraodon nigroviridis 48 9e-93 339
WERAM-Caf-0116 ENSCAFP00000015619.3 Canis familiaris 47 1e-92 338
WERAM-Dan-0175 ENSDNOP00000033349.1 Dasypus novemcinctus 46 2e-92 338
WERAM-Leo-0014 ENSLOCP00000002993.1 Lepisosteus oculatus 48 4e-92 337
WERAM-Dar-0035 ENSDARP00000051798.4 Danio rerio 46 6e-92 336
WERAM-Myl-0152 ENSMLUP00000012593.2 Myotis lucifugus 46 8e-92 336
WERAM-Gam-0211 ENSGMOP00000020496.1 Gadus morhua 47 1e-91 335
WERAM-Gaa-0093 ENSGACP00000012045.1 Gasterosteus aculeatus 47 2e-91 335
WERAM-Cae-0007 R06C1.1.2 Caenorhabditis elegans 50 7e-91 333
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 48 8e-91 332
WERAM-Paa-0030 ENSPANP00000015145.1 Papio anubis 48 9e-91 332
WERAM-Chs-0191 ENSCSAP00000011772.1 Chlorocebus sabaeus 48 9e-91 332
WERAM-Fia-0139 ENSFALP00000011453.1 Ficedula albicollis 48 9e-91 332
WERAM-Mod-0165 ENSMODP00000022264.3 Monodelphis domestica 48 1e-90 332
WERAM-Ict-0111 ENSSTOP00000011457.2 Ictidomys tridecemlineatus 48 1e-90 332
WERAM-Aim-0087 ENSAMEP00000008076.1 Ailuropoda melanoleuca 46 1e-90 332
WERAM-Sus-0028 ENSSSCP00000004781.2 Sus scrofa 47 1e-90 332
WERAM-Osl-0001 ABO94696 Ostreococcus lucimarinus 46 2e-90 331
WERAM-Pat-0155 ENSPTRP00000049696.3 Pan troglodytes 47 3e-90 330
WERAM-Cii-0014 ENSCINP00000005410.3 Ciona intestinalis 46 6e-90 329
WERAM-Pes-0020 ENSPSIP00000004435.1 Pelodiscus sinensis 46 8e-90 329
WERAM-Drm-0018 FBpp0073173 Drosophila melanogaster 46 9e-90 329
WERAM-Scp-0016 SPAC3G9.07c.1:pep Schizosaccharomyces pombe 46 1e-89 328
WERAM-Tut-0167 ENSTTRP00000014262.1 Tursiops truncatus 46 1e-89 328
WERAM-Meg-0047 ENSMGAP00000004521.2 Meleagris gallopavo 47 1e-88 325
WERAM-Eqc-0125 ENSECAP00000014039.1 Equus caballus 47 4e-88 323
WERAM-Anp-0136 ENSAPLP00000014652.1 Anas platyrhynchos 46 5e-88 323
WERAM-Mam-0073 ENSMMUP00000011716.2 Macaca mulatta 51 1e-86 319
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 46 1e-86 319
WERAM-Lab-0002 EDR16061 Laccaria bicolor 45 1e-86 318
WERAM-Scs-0023 EDO03342 Sclerotinia sclerotiorum 45 1e-86 318
WERAM-Lac-0087 ENSLACP00000011092.1 Latimeria chalumnae 44 2e-86 318
WERAM-Fec-0127 ENSFCAP00000011581.3 Felis catus 47 2e-86 318
Created Date 25-Jun-2016