Tag |
Content |
WERAM ID |
WERAM-Mua-0145 |
Ensembl Protein ID |
GSMUA_AchrUn_randomP00520_001 |
Gene Name |
|
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
9.50e-96 |
321.6 |
92 |
408 |
HDAC |
Class-I |
1.10e-31 |
111.4 |
34 |
377 |
|
Organism |
Musa acuminata |
Domain Profile |
HDAC Class-II
class-2.txt 15 aleenkekhpEkpeRiqailsrlqeagllek.....leelka.rkatkeelqlvHseehvelletaeklekeelesltvd 88 a+ +nke+hpE+ +R+ ai+++l++ +l +k ++e+++ r at ++++ vH +++++ le+a+++ + e + GSMUA_AchrUn_randomP00520_001 92 AMGHNKESHPESNKRVPAIIDALEKLELSPKyryseVFEVQNfRPATMDDIARVHARTYITGLEKAMSKATDEGIIFIDG 171 45678899********************995444447788777***********************955555555599** PP class-2.txt 89 sdsiylesksikaarlavGavlelvdkvlkgel..kn...gfavvRPPGHHaeestamGFClfnnvavaakllqqklkvk 163 s+ +y+++++++ a +a+Ga ++lvd+v+++++ +n gfa+vRPPGHHa ++ +mGFC+f n+avaa+++q+ + +k GSMUA_AchrUn_randomP00520_001 172 SGPTYATKTTFEEALIAAGAGISLVDSVVEASMatRNppiGFALVRPPGHHAVPKGPMGFCVFGNIAVAARHAQHAHGLK 251 ******************************9995544888**************************************** PP class-2.txt 164 kilivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafre 243 k+li+D+DvHhGnGt ++fy+dp+v+++S+H + gs +p g+g++++vg+g+geg+++N++++gg+ gd+ ++ +f+e GSMUA_AchrUn_randomP00520_001 252 KVLIIDFDVHHGNGTCDAFYDDPDVFFISTH--QVGS-YP--GTGKIEQVGQGSGEGTTLNLPLPGGS-GDNSMRSVFDE 325 *******************************..99**.88..8***********************99.*********** PP class-2.txt 244 vvlpiakeFkPdlvlvsaGfDaaegdplgglsvtakcyatltkqllkl....aggrvvlvlEGGynlkaiaeaveavvka 319 v++p+a++FkPd+vlvsaG+Da++ dpl+gl++t+ +y +l+ ++++l +ggr+v++lEGGynl++++++v+ +++a GSMUA_AchrUn_randomP00520_001 326 VIVPCAQRFKPDIVLVSAGYDAHALDPLAGLQFTTGTYYMLASSIKQLanelCGGRCVFFLEGGYNLQSLSSSVADTFRA 405 *****************************************99999988888*************************999 PP class-2.txt 320 Llg 322 lg GSMUA_AchrUn_randomP00520_001 406 FLG 408 875 PP
HDAC Class-I
class-1.txt 57 lkfhseeyieflkkvepenaeels 80 l+f+s++y+ f+++ +++ + GSMUA_AchrUn_randomP00520_001 34 LTFKSKDYLMFIQRRIMRHMSLNI 57 579999999999987776666443 PP class-1.txt 17 gqkhpmkpkrlsltheLv......lnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvge 90 +++hp +kr+ + + + +y s+ +e+ + + a++++++++h+ yi+ l+k ++ ++e + ++ GSMUA_AchrUn_randomP00520_001 97 KESHPESNKRVPAIIDALeklelsPKYRYSEVFEVQNFRPATMDDIARVHARTYITGLEKAMSKATDEGI-----IFIDG 171 445555555543332222122233789999999*************************998877776655.....45788 PP class-1.txt 91 dcPvf..dglfeycqlitGasleaakkLnkkead...iainwa...GGlhhakkseasGfcyvnDivlailellkkh..k 160 P + + fe + + +Ga ++ ++ + + ++ i +a hha + Gfc +i +a + ++ h k GSMUA_AchrUn_randomP00520_001 172 SGPTYatKTTFEEALIAAGAGISLVDSVVEASMAtrnPPIGFAlvrPPGHHAVPKGPMGFCVFGNIAVAARHAQHAHglK 251 888761156777788999**99998887765443111345544112345********************99998855449 PP class-1.txt 161 rvlyididlhhGDgveeafyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksvisk 240 +vl id+d+hhG+g +afy v+ +s h+ g +PgtG++++vg+++g ++n+Pl g D+s++++f +vi + GSMUA_AchrUn_randomP00520_001 252 KVLIIDFDVHHGNGTCDAFYDDPDVFFISTHQVGS--YPGTGKIEQVGQGSGEGTTLNLPLPGGSGDNSMRSVFDEVIVP 329 ***********************************..9****************************************** PP class-1.txt 241 vieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksfnlpl 288 ++f+P++v++ G D+ a D+l+ ++++ ++ + +k+ +l GSMUA_AchrUn_randomP00520_001 330 CAQRFKPDIVLVSAGYDAHALDPLAGLQFTTGTYYMLASSIKQLANEL 377 *****************************9988888877777775443 PP
|
Protein Sequence (Fasta) | MSPLMELRAL PPPTLAGCML PSVRQHTHGL RIRLTFKSKD YLMFIQRRIM RHMSLNIRSS 60 AENDSGIKDD MKAASSIKPF YDARILYSMA PAMGHNKESH PESNKRVPAI IDALEKLELS 120 PKYRYSEVFE VQNFRPATMD DIARVHARTY ITGLEKAMSK ATDEGIIFID GSGPTYATKT 180 TFEEALIAAG AGISLVDSVV EASMATRNPP IGFALVRPPG HHAVPKGPMG FCVFGNIAVA 240 ARHAQHAHGL KKVLIIDFDV HHGNGTCDAF YDDPDVFFIS THQVGSYPGT GKIEQVGQGS 300 GEGTTLNLPL PGGSGDNSMR SVFDEVIVPC AQRFKPDIVL VSAGYDAHAL DPLAGLQFTT 360 GTYYMLASSI KQLANELCGG RCVFFLEGGY NLQSLSSSVA DTFRAFLGEP SLASQFDDPA 420 MLYEEPLSRV KKVLQKAKHI HSL 443Protein Fasta Sequence
>GSMUA_AchrUn_randomP00520_001|Class-I|Musa acuminata MSPLMELRALPPPTLAGCMLPSVRQHTHGLRIRLTFKSKDYLMFIQRRIMRHMSLNIRSSAENDSGIKDDMKAASSIKPFYDARILYSMAPAMGHNKESHPESNKRVPAIIDALEKLELSPKYRYSEVFEVQNFRPATMDDIARVHARTYITGLEKAMSKATDEGIIFIDGSGPTYATKTTFEEALIAAGAGISLVDSVVEASMATRNPPIGFALVRPPGHHAVPKGPMGFCVFGNIAVAARHAQHAHGLKKVLIIDFDVHHGNGTCDAFYDDPDVFFISTHQVGSYPGTGKIEQVGQGSGEGTTLNLPLPGGSGDNSMRSVFDEVIVPCAQRFKPDIVLVSAGYDAHALDPLAGLQFTTGTYYMLASSIKQLANELCGGRCVFFLEGGYNLQSLSSSVADTFRAFLGEPSLASQFDDPAMLYEEPLSRVKKVLQKAKHIHSL
|
Nucleotide Sequence (Fasta) | AGAACGAACG CATCGAAACG GGTTGTGGCG CGGATGCTCT CAGTGAGCGT AGATGAGTCC 60 GCTGATGGAG CTCCGAGCGC TGCCTCCTCC AACCCTCGCT GGGTGCATGC TTCCATCAGT 120 TAGACAACAT ACTCATGGCC TAAGGATTCG TTTGACCTTC AAATCAAAGG ATTATTTAAT 180 GTTTATTCAA AGACGGATCA TGCGGCACAT GTCGTTGAAC ATAAGAAGCT CAGCAGAGAA 240 TGATAGTGGC ATCAAAGATG ATATGAAGGC AGCTTCCTCC ATAAAACCAT TTTATGATGC 300 CCGTATTCTC TATAGCATGG CACCAGCCAT GGGTCATAAT AAGGAATCTC ACCCAGAATC 360 AAATAAAAGG GTGCCAGCAA TTATTGATGC TCTTGAAAAG TTGGAACTCT CTCCTAAGTA 420 CCGCTATTCG GAGGTGTTTG AAGTACAAAA CTTTCGACCT GCTACTATGG ATGATATTGC 480 ACGTGTCCAT GCAAGAACCT ACATTACTGG CCTTGAGAAG GCCATGTCTA AGGCAACTGA 540 TGAAGGTATC ATTTTTATTG ATGGATCTGG GCCAACATAT GCCACAAAAA CTACATTTGA 600 AGAAGCACTT ATTGCAGCCG GTGCAGGGAT TTCCTTAGTT GATTCAGTGG TTGAAGCATC 660 AATGGCCACC CGCAATCCAC CTATAGGATT TGCCTTAGTA CGACCACCTG GTCATCATGC 720 AGTTCCAAAA GGTCCTATGG GTTTTTGTGT CTTTGGAAAT ATTGCGGTTG CTGCGCGCCA 780 TGCACAACAT GCACATGGAT TGAAAAAGGT TCTTATAATT GATTTTGATG TTCACCATGG 840 TAATGGAACA TGTGATGCAT TTTATGATGA TCCAGATGTA TTCTTCATTT CTACTCATCA 900 GGTTGGAAGT TATCCTGGTA CTGGCAAGAT TGAACAGGTT GGTCAAGGCA GTGGTGAAGG 960 AACAACACTT AATCTGCCTC TACCTGGAGG GTCAGGAGAT AATTCAATGA GATCTGTATT 1020 TGATGAGGTC ATTGTTCCAT GTGCCCAAAG ATTTAAGCCT GACATAGTTC TTGTTTCAGC 1080 TGGTTATGAT GCTCATGCAT TGGACCCATT AGCTGGTCTG CAATTTACAA CTGGCACATA 1140 CTACATGCTA GCATCAAGCA TAAAGCAACT TGCAAATGAG CTATGCGGCG GACGCTGTGT 1200 GTTCTTCTTG GAAGGTGGAT ACAATCTCCA ATCTCTGTCT AGTTCTGTTG CTGATACCTT 1260 CCGAGCATTC CTTGGGGAAC CAAGCTTGGC TTCCCAGTTT GATGATCCTG CAATGCTGTA 1320 TGAAGAACCC TTGTCTAGAG TGAAAAAAGT ACTTCAGAAG GCCAAACACA TACATTCTCT 1380 CTGAACTTTT GAGAATTGCA TACTGTAGTC ATTAAAAATT TATCAGTCAA CCCATAAGCT 1440 TTTAGTCATT TCCAGTTGTA TATTTTGATA CACATTGCAT AATAGAAAAT GGTACATATT 1500 TTTC
1505Nucleotide Fasta Sequence
>GSMUA_AchrUn_randomP00520_001|Class-I|Musa acuminata AGAACGAACGCATCGAAACGGGTTGTGGCGCGGATGCTCTCAGTGAGCGTAGATGAGTCCGCTGATGGAGCTCCGAGCGCTGCCTCCTCCAACCCTCGCTGGGTGCATGCTTCCATCAGTTAGACAACATACTCATGGCCTAAGGATTCGTTTGACCTTCAAATCAAAGGATTATTTAATGTTTATTCAAAGACGGATCATGCGGCACATGTCGTTGAACATAAGAAGCTCAGCAGAGAATGATAGTGGCATCAAAGATGATATGAAGGCAGCTTCCTCCATAAAACCATTTTATGATGCCCGTATTCTCTATAGCATGGCACCAGCCATGGGTCATAATAAGGAATCTCACCCAGAATCAAATAAAAGGGTGCCAGCAATTATTGATGCTCTTGAAAAGTTGGAACTCTCTCCTAAGTACCGCTATTCGGAGGTGTTTGAAGTACAAAACTTTCGACCTGCTACTATGGATGATATTGCACGTGTCCATGCAAGAACCTACATTACTGGCCTTGAGAAGGCCATGTCTAAGGCAACTGATGAAGGTATCATTTTTATTGATGGATCTGGGCCAACATATGCCACAAAAACTACATTTGAAGAAGCACTTATTGCAGCCGGTGCAGGGATTTCCTTAGTTGATTCAGTGGTTGAAGCATCAATGGCCACCCGCAATCCACCTATAGGATTTGCCTTAGTACGACCACCTGGTCATCATGCAGTTCCAAAAGGTCCTATGGGTTTTTGTGTCTTTGGAAATATTGCGGTTGCTGCGCGCCATGCACAACATGCACATGGATTGAAAAAGGTTCTTATAATTGATTTTGATGTTCACCATGGTAATGGAACATGTGATGCATTTTATGATGATCCAGATGTATTCTTCATTTCTACTCATCAGGTTGGAAGTTATCCTGGTACTGGCAAGATTGAACAGGTTGGTCAAGGCAGTGGTGAAGGAACAACACTTAATCTGCCTCTACCTGGAGGGTCAGGAGATAATTCAATGAGATCTGTATTTGATGAGGTCATTGTTCCATGTGCCCAAAGATTTAAGCCTGACATAGTTCTTGTTTCAGCTGGTTATGATGCTCATGCATTGGACCCATTAGCTGGTCTGCAATTTACAACTGGCACATACTACATGCTAGCATCAAGCATAAAGCAACTTGCAAATGAGCTATGCGGCGGACGCTGTGTGTTCTTCTTGGAAGGTGGATACAATCTCCAATCTCTGTCTAGTTCTGTTGCTGATACCTTCCGAGCATTCCTTGGGGAACCAAGCTTGGCTTCCCAGTTTGATGATCCTGCAATGCTGTATGAAGAACCCTTGTCTAGAGTGAAAAAAGTACTTCAGAAGGCCAAACACATACATTCTCTCTGAACTTTTGAGAATTGCATACTGTAGTCATTAAAAATTTATCAGTCAACCCATAAGCTTTTAGTCATTTCCAGTTGTATATTTTGATACACATTGCATAATAGAAAATGGTACATATTTTTC
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |