| Tag |
Content |
| WERAM ID |
WERAM-Zem-0099 |
| Ensembl Protein ID |
GRMZM2G172883_P01 |
| Gene Name |
hda101 ZEAMMB73_699642 |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
2.30e-164 |
548.1 |
23 |
333 |
|
| Organism |
Zea mays |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedc 92
++v+y+yd+dvg+y+ygq+hpmkp+r+++th+L+ ygl +++++++p+ a+ ++l++fh+++yi+fl++v+pe++++ ++ lk+fnvgedc
GRMZM2G172883_P01 23 RRVCYFYDPDVGNYYYGQGHPMKPHRIRMTHSLLARYGLLNQMQVYRPNPARDRDLCRFHADDYINFLRSVTPETQQDQIRLLKRFNVGEDC 114
589***************************************************************************************** PP
class-1.txt 93 PvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdr 184
Pvfdgl+++cq+++Gas+ +a kLn++ diainw+GGlhhakk+easGfcyvnDivlailellk+h+rvly+did+hhGDgveeafyttdr
GRMZM2G172883_P01 115 PVFDGLYSFCQTYAGASVGGAVKLNHG-HDIAINWSGGLHHAKKCEASGFCYVNDIVLAILELLKHHERVLYVDIDIHHGDGVEEAFYTTDR 205
************************997.59************************************************************** PP
class-1.txt 185 vmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghae 276
vmtvsfhk+g+ +fPgtGd++d+g+ kgkyy++nvPl+dgidDesy+++fk+++ kv+e+f+P avvlqcGaDsl+gDrlg+fnlsikghae
GRMZM2G172883_P01 206 VMTVSFHKFGD-YFPGTGDIRDIGHSKGKYYSLNVPLDDGIDDESYQSLFKPIMGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAE 296
***********.******************************************************************************** PP
class-1.txt 277 cvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
cv++++sfn+pll+lGGGGYt+rnvaRcw+yet+v+l
GRMZM2G172883_P01 297 CVRYMRSFNVPLLLLGGGGYTIRNVARCWCYETGVAL 333
**********************************986 PP
|
Protein Sequence
(Fasta) | MDPSSAGSGG NSLPSVGPDG QKRRVCYFYD PDVGNYYYGQ GHPMKPHRIR MTHSLLARYG 60
LLNQMQVYRP NPARDRDLCR FHADDYINFL RSVTPETQQD QIRLLKRFNV GEDCPVFDGL 120
YSFCQTYAGA SVGGAVKLNH GHDIAINWSG GLHHAKKCEA SGFCYVNDIV LAILELLKHH 180
ERVLYVDIDI HHGDGVEEAF YTTDRVMTVS FHKFGDYFPG TGDIRDIGHS KGKYYSLNVP 240
LDDGIDDESY QSLFKPIMGK VMEVFRPGAV VLQCGADSLS GDRLGCFNLS IKGHAECVRY 300
MRSFNVPLLL LGGGGYTIRN VARCWCYETG VALGQEPEDK MPVNEYYEYF GPDYTLHVAP 360
SNMENKNTRQ QLDDIRSKLL DNLSKLRHAP SVHFQERVPD TEIPEQDEDQ DDPDERHDPD 420
SDMEVDDHKA VEESSRRSIL GIKIKREFGE NATRVQDGGR VASEHRGLEP MAEDIGSSKQ 480
APQADASAMA IDEPSNVKNE PESSTKLQGQ AAAYHKP 517Protein Fasta Sequence
>GRMZM2G172883_P01|Class-I|Zea mays
MDPSSAGSGGNSLPSVGPDGQKRRVCYFYDPDVGNYYYGQGHPMKPHRIRMTHSLLARYGLLNQMQVYRPNPARDRDLCRFHADDYINFLRSVTPETQQDQIRLLKRFNVGEDCPVFDGLYSFCQTYAGASVGGAVKLNHGHDIAINWSGGLHHAKKCEASGFCYVNDIVLAILELLKHHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGHSKGKYYSLNVPLDDGIDDESYQSLFKPIMGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGQEPEDKMPVNEYYEYFGPDYTLHVAPSNMENKNTRQQLDDIRSKLLDNLSKLRHAPSVHFQERVPDTEIPEQDEDQDDPDERHDPDSDMEVDDHKAVEESSRRSILGIKIKREFGENATRVQDGGRVASEHRGLEPMAEDIGSSKQAPQADASAMAIDEPSNVKNEPESSTKLQGQAAAYHKP |
Nucleotide Sequence
(Fasta) | TGCTTCTCGC CCTACCATCG CCTGACCGAC GCGCCCGTTT TCTCCTGAAA ACAGAAGGCT 60
CCGGCCTCCG GCATCCGCCA AAAAGGGGAA AAAAGGAGAG ATAACACACA CACACACAAA 120
CCCCAATCCC CTGCGGCGGC GATGGACCCG TCATCGGCGG GCTCCGGCGG CAACTCCCTC 180
CCGTCCGTCG GCCCCGACGG GCAGAAGCGG CGCGTGTGCT ACTTCTACGA CCCGGATGTG 240
GGCAACTACT ACTACGGGCA GGGCCATCCG ATGAAGCCGC ACCGCATCCG GATGACGCAC 300
TCGCTGCTGG CGCGCTACGG CCTCCTCAAC CAGATGCAGG TGTACCGCCC CAACCCGGCC 360
CGCGACCGCG ACCTCTGCCG CTTCCACGCC GACGACTACA TCAACTTCCT GCGCTCCGTC 420
ACGCCGGAAA CGCAGCAGGA CCAGATCCGC CTGCTCAAGC GCTTCAACGT CGGCGAGGAC 480
TGCCCCGTCT TCGACGGCCT CTACAGCTTC TGCCAGACCT ATGCGGGCGC CTCCGTCGGC 540
GGGGCCGTCA AGCTCAACCA CGGCCATGAC ATCGCAATCA ACTGGTCGGG GGGCCTGCAC 600
CACGCCAAGA AGTGCGAGGC GTCGGGCTTC TGCTACGTCA ATGACATCGT GCTCGCCATA 660
CTCGAGCTGC TCAAGCATCA CGAGAGAGTT CTGTATGTCG ATATCGATAT CCACCATGGT 720
GATGGAGTGG AGGAGGCTTT CTACACAACA GATAGGGTTA TGACTGTCTC GTTCCACAAG 780
TTTGGTGATT ATTTCCCAGG AACAGGGGAT ATCCGTGACA TTGGGCACTC AAAAGGGAAG 840
TACTACTCCC TGAATGTCCC TCTAGATGAT GGGATTGATG ATGAAAGCTA CCAGTCCCTT 900
TTTAAGCCAA TCATGGGCAA AGTTATGGAG GTTTTCCGCC CTGGTGCAGT TGTGCTTCAG 960
TGTGGTGCTG ATTCCTTGTC TGGGGATAGG TTGGGCTGCT TCAACCTCTC AATCAAAGGT 1020
CATGCGGAAT GTGTTAGGTA TATGAGGTCT TTCAACGTTC CATTGTTGCT CCTTGGTGGT 1080
GGTGGATATA CCATAAGAAA TGTTGCACGC TGTTGGTGTT ATGAGACTGG AGTTGCTCTT 1140
GGCCAAGAGC CTGAAGACAA GATGCCTGTT AATGAGTACT ATGAATACTT CGGTCCAGAT 1200
TACACTCTTC ATGTTGCACC AAGTAACATG GAGAACAAAA ATACACGACA ACAACTGGAT 1260
GATATACGAT CTAAACTTCT GGATAATCTT TCAAAACTTC GACATGCTCC TAGTGTCCAC 1320
TTTCAAGAGA GAGTTCCTGA CACAGAAATA CCTGAGCAAG ATGAAGATCA AGATGATCCA 1380
GATGAACGAC ATGATCCTGA CTCTGATATG GAAGTGGATG ACCACAAGGC TGTGGAAGAG 1440
TCATCGAGGA GGAGCATTCT AGGTATAAAA ATCAAGAGAG AATTTGGTGA AAATGCGACC 1500
AGAGTACAGG ATGGTGGCAG GGTTGCATCT GAACATAGAG GACTGGAACC CATGGCAGAA 1560
GACATTGGTT CCTCCAAGCA AGCTCCTCAG GCAGATGCCA GTGCAATGGC CATCGATGAA 1620
CCAAGCAATG TCAAGAATGA ACCTGAGAGC TCAACTAAAT TGCAAGGCCA AGCAGCTGCG 1680
TACCACAAGC CATAGCTGCG ACCATCAAGA GTTGCTGGGT TTCTGCTAGG CAACTTCCTG 1740
CTTGATTTGG ACAGTCCAGA AAACAGAAGT GAATCCGCAA TACGTCCCTG CCATTTCAAA 1800
TTTGACTTGG TTACACCTAT CTGTGACAAT GTTAATGTAA TGAGATCCCA TGGCACTAGT 1860
GAAGTTCCCA GGTGTCCACC TGGGATTGCT TGCGGTTGAG AGAGACGATA GTCTGATGAC 1920
CCATGTATAC ATGAAGCCCA TGATCTCAGT TGTACAGTCA TTAGCCAATA CAAATATGCA 1980
GTGGACTAAA GGGTGATTCA TTGCGTGTTC TTAATGGTTT TGTGTCCTGA CTCGTCCTTT 2040
TTTTTGTGCG GAAGCAAGGT AGGCAGTTGC TGTGCCGCAA ATTTGCCGAG TTTGTAGAAT 2100
GCTGATGCAA ATACATGCGC TATCTGCCT
Nucleotide Fasta Sequence
>GRMZM2G172883_P01|Class-I|Zea mays
TGCTTCTCGCCCTACCATCGCCTGACCGACGCGCCCGTTTTCTCCTGAAAACAGAAGGCTCCGGCCTCCGGCATCCGCCAAAAAGGGGAAAAAAGGAGAGATAACACACACACACACAAACCCCAATCCCCTGCGGCGGCGATGGACCCGTCATCGGCGGGCTCCGGCGGCAACTCCCTCCCGTCCGTCGGCCCCGACGGGCAGAAGCGGCGCGTGTGCTACTTCTACGACCCGGATGTGGGCAACTACTACTACGGGCAGGGCCATCCGATGAAGCCGCACCGCATCCGGATGACGCACTCGCTGCTGGCGCGCTACGGCCTCCTCAACCAGATGCAGGTGTACCGCCCCAACCCGGCCCGCGACCGCGACCTCTGCCGCTTCCACGCCGACGACTACATCAACTTCCTGCGCTCCGTCACGCCGGAAACGCAGCAGGACCAGATCCGCCTGCTCAAGCGCTTCAACGTCGGCGAGGACTGCCCCGTCTTCGACGGCCTCTACAGCTTCTGCCAGACCTATGCGGGCGCCTCCGTCGGCGGGGCCGTCAAGCTCAACCACGGCCATGACATCGCAATCAACTGGTCGGGGGGCCTGCACCACGCCAAGAAGTGCGAGGCGTCGGGCTTCTGCTACGTCAATGACATCGTGCTCGCCATACTCGAGCTGCTCAAGCATCACGAGAGAGTTCTGTATGTCGATATCGATATCCACCATGGTGATGGAGTGGAGGAGGCTTTCTACACAACAGATAGGGTTATGACTGTCTCGTTCCACAAGTTTGGTGATTATTTCCCAGGAACAGGGGATATCCGTGACATTGGGCACTCAAAAGGGAAGTACTACTCCCTGAATGTCCCTCTAGATGATGGGATTGATGATGAAAGCTACCAGTCCCTTTTTAAGCCAATCATGGGCAAAGTTATGGAGGTTTTCCGCCCTGGTGCAGTTGTGCTTCAGTGTGGTGCTGATTCCTTGTCTGGGGATAGGTTGGGCTGCTTCAACCTCTCAATCAAAGGTCATGCGGAATGTGTTAGGTATATGAGGTCTTTCAACGTTCCATTGTTGCTCCTTGGTGGTGGTGGATATACCATAAGAAATGTTGCACGCTGTTGGTGTTATGAGACTGGAGTTGCTCTTGGCCAAGAGCCTGAAGACAAGATGCCTGTTAATGAGTACTATGAATACTTCGGTCCAGATTACACTCTTCATGTTGCACCAAGTAACATGGAGAACAAAAATACACGACAACAACTGGATGATATACGATCTAAACTTCTGGATAATCTTTCAAAACTTCGACATGCTCCTAGTGTCCACTTTCAAGAGAGAGTTCCTGACACAGAAATACCTGAGCAAGATGAAGATCAAGATGATCCAGATGAACGACATGATCCTGACTCTGATATGGAAGTGGATGACCACAAGGCTGTGGAAGAGTCATCGAGGAGGAGCATTCTAGGTATAAAAATCAAGAGAGAATTTGGTGAAAATGCGACCAGAGTACAGGATGGTGGCAGGGTTGCATCTGAACATAGAGGACTGGAACCCATGGCAGAAGACATTGGTTCCTCCAAGCAAGCTCCTCAGGCAGATGCCAGTGCAATGGCCATCGATGAACCAAGCAATGTCAAGAATGAACCTGAGAGCTCAACTAAATTGCAAGGCCAAGCAGCTGCGTACCACAAGCCATAGCTGCGACCATCAAGAGTTGCTGGGTTTCTGCTAGGCAACTTCCTGCTTGATTTGGACAGTCCAGAAAACAGAAGTGAATCCGCAATACGTCCCTGCCATTTCAAATTTGACTTGGTTACACCTATCTGTGACAATGTTAATGTAATGAGATCCCATGGCACTAGTGAAGTTCCCAGGTGTCCACCTGGGATTGCTTGCGGTTGAGAGAGACGATAGTCTGATGACCCATGTATACATGAAGCCCATGATCTCAGTTGTACAGTCATTAGCCAATACAAATATGCAGTGGACTAAAGGGTGATTCATTGCGTGTTCTTAATGGTTTTGTGTCCTGACTCGTCCTTTTTTTTGTGCGGAAGCAAGGTAGGCAGTTGCTGTGCCGCAAATTTGCCGAGTTTGTAGAATGCTGATGCAAATACATGCGCTATCTGCCT
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
