| Tag |
Content |
| WERAM ID |
WERAM-Amt-0016 |
| Ensembl Protein ID |
ERM94967 |
| Gene Name |
|
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
4.80e-165 |
549.1 |
17 |
328 |
|
| Organism |
Amborella trichopoda |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdgl 98
+kv+y+yd++vg+y+ygq+hpmkp+r+++th L+ +ygl ++++++kp ++ ++l+kfh+++y+ fl+ ++pe++++++k lk+fnvgedcPvfdgl
ERM94967 17 RKVSYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLHQMQVLKPFPSRDRDLCKFHADDYVAFLRGITPETQQDHMKALKRFNVGEDCPVFDGL 114
589*********************************************************************************************** PP
class-1.txt 99 feycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvmtvsfhkygee 196
+++cq+++G+s+ +a kLn++ +diainwaGGlhhakk+easGfcyvnDivlailellk+h+rvly+did+hhGDgveeafyttdrvmtvsfhk+g+
ERM94967 115 YSFCQTYAGGSVGGAVKLNHRLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGD- 211
*************************************************************************************************. PP
class-1.txt 197 ffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksfnlpllvlGGG 294
+fPgtGd++d+g +kgkyy++nvPl+dgidD+sy+ +fk+++ kv+e+f+P avvlqcGaDsl+gDrlg+fnlsikghaecv+f++sfn+pll+lGGG
ERM94967 212 YFPGTGDIRDIGYGKGKYYSLNVPLDDGIDDDSYQFLFKPIMAKVMEVFQPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRFMRSFNVPLLLLGGG 309
************************************************************************************************** PP
class-1.txt 295 GYtlrnvaRcwtyetavvl 313
GYt+rnvaRcw+yet+v++
ERM94967 310 GYTIRNVARCWCYETGVAI 328
****************975 PP
|
Protein Sequence
(Fasta) | MDTGGSSLPS GPDGVKRKVS YFYDPEVGNY YYGQGHPMKP HRIRMTHALL AHYGLLHQMQ 60
VLKPFPSRDR DLCKFHADDY VAFLRGITPE TQQDHMKALK RFNVGEDCPV FDGLYSFCQT 120
YAGGSVGGAV KLNHRLCDIA INWAGGLHHA KKCEASGFCY VNDIVLAILE LLKQHERVLY 180
VDIDIHHGDG VEEAFYTTDR VMTVSFHKFG DYFPGTGDIR DIGYGKGKYY SLNVPLDDGI 240
DDDSYQFLFK PIMAKVMEVF QPGAVVLQCG ADSLSGDRLG CFNLSIKGHA ECVRFMRSFN 300
VPLLLLGGGG YTIRNVARCW CYETGVAIGV EVDDKMPQHE YYEYFGPDYT LHVAPSNMEN 360
KNSRQLVENI KVKSLQNLSR LPHAPSVPFY ERPPDTELPE EDDDYDRKEE RLESDHLNLD 420
TEMGELKHSN EVIWYPDRKS IPSIQNIRPK KAIGEAELKD ENQDDRKEVV ENVRCMDIET 480
EENLGSKSSE PVLVETDQPR SNITEP 506Protein Fasta Sequence
>ERM94967|Class-I|Amborella trichopoda
MDTGGSSLPSGPDGVKRKVSYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLHQMQVLKPFPSRDRDLCKFHADDYVAFLRGITPETQQDHMKALKRFNVGEDCPVFDGLYSFCQTYAGGSVGGAVKLNHRLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYGKGKYYSLNVPLDDGIDDDSYQFLFKPIMAKVMEVFQPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVAIGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLVENIKVKSLQNLSRLPHAPSVPFYERPPDTELPEEDDDYDRKEERLESDHLNLDTEMGELKHSNEVIWYPDRKSIPSIQNIRPKKAIGEAELKDENQDDRKEVVENVRCMDIETEENLGSKSSEPVLVETDQPRSNITEP |
Nucleotide Sequence
(Fasta) | ATGGACACTG GAGGAAGCTC TCTTCCTTCA GGCCCTGACG GGGTGAAGCG AAAGGTCTCG 60
TATTTCTATG ACCCAGAGGT CGGGAACTAT TATTATGGTC AAGGTCACCC CATGAAGCCC 120
CATCGAATCC GTATGACCCA TGCCCTTTTG GCTCATTATG GCCTCCTCCA CCAAATGCAA 180
GTTCTCAAGC CCTTCCCTTC TAGGGATAGG GATTTATGCA AGTTCCATGC TGATGATTAT 240
GTTGCTTTTT TGAGGGGTAT AACTCCTGAA ACTCAACAAG ATCATATGAA GGCATTAAAG 300
AGGTTCAACG TGGGAGAAGA TTGCCCGGTT TTTGATGGTC TTTACTCTTT TTGTCAAACT 360
TATGCTGGTG GATCAGTTGG GGGTGCTGTG AAATTGAACC ATAGGCTCTG TGATATTGCC 420
ATCAATTGGG CTGGGGGCCT TCACCATGCC AAAAAGTGTG AGGCTTCAGG GTTTTGTTAT 480
GTGAATGATA TTGTGTTGGC AATTTTGGAA CTATTGAAGC AGCATGAGCG GGTTCTGTAT 540
GTTGATATTG ACATCCACCA TGGAGATGGT GTTGAGGAAG CCTTTTACAC AACTGACAGG 600
GTTATGACAG TTTCGTTCCA TAAGTTTGGC GATTATTTCC CTGGGACAGG TGATATTCGT 660
GATATTGGGT ACGGAAAAGG GAAATATTAC TCTTTGAATG TGCCTCTGGA TGATGGAATT 720
GATGATGACA GCTACCAATT CTTATTTAAG CCGATCATGG CCAAAGTTAT GGAAGTTTTT 780
CAACCGGGTG CCGTTGTTTT ACAGTGCGGG GCTGACTCCC TATCAGGAGA TCGACTAGGT 840
TGCTTCAACC TATCCATCAA AGGCCATGCA GAGTGTGTGA GGTTCATGAG ATCATTCAAT 900
GTGCCATTGC TCCTCCTCGG CGGCGGTGGG TACACCATTA GGAATGTGGC TAGATGCTGG 960
TGTTATGAGA CAGGAGTTGC CATTGGTGTG GAAGTTGATG ATAAGATGCC CCAACATGAG 1020
TATTATGAGT ATTTTGGACC TGACTATACT CTGCATGTTG CCCCGAGTAA TATGGAAAAC 1080
AAAAATTCAC GGCAATTAGT TGAGAACATT AAAGTAAAGT CGCTTCAGAA TCTCTCCAGG 1140
CTTCCACATG CCCCTAGTGT CCCATTTTAT GAGCGGCCCC CTGATACTGA GCTTCCTGAG 1200
GAAGATGATG ACTACGACAG AAAAGAAGAG AGATTGGAAA GCGATCACTT GAATTTGGAT 1260
ACTGAAATGG GTGAATTGAA GCATTCAAAT GAGGTTATTT GGTACCCTGA CAGGAAGTCT 1320
ATCCCATCCA TCCAAAATAT TCGACCAAAG AAAGCAATTG GAGAGGCTGA GCTAAAAGAT 1380
GAGAATCAGG ATGATCGGAA GGAAGTGGTA GAGAATGTTA GATGCATGGA TATTGAAACA 1440
GAAGAAAACC TTGGCTCAAA GTCTTCAGAA CCTGTTCTCG TGGAGACTGA CCAGCCAAGG 1500
AGCAATATCA CTGAGCCATA G
1522Nucleotide Fasta Sequence
>ERM94967|Class-I|Amborella trichopoda
ATGGACACTGGAGGAAGCTCTCTTCCTTCAGGCCCTGACGGGGTGAAGCGAAAGGTCTCGTATTTCTATGACCCAGAGGTCGGGAACTATTATTATGGTCAAGGTCACCCCATGAAGCCCCATCGAATCCGTATGACCCATGCCCTTTTGGCTCATTATGGCCTCCTCCACCAAATGCAAGTTCTCAAGCCCTTCCCTTCTAGGGATAGGGATTTATGCAAGTTCCATGCTGATGATTATGTTGCTTTTTTGAGGGGTATAACTCCTGAAACTCAACAAGATCATATGAAGGCATTAAAGAGGTTCAACGTGGGAGAAGATTGCCCGGTTTTTGATGGTCTTTACTCTTTTTGTCAAACTTATGCTGGTGGATCAGTTGGGGGTGCTGTGAAATTGAACCATAGGCTCTGTGATATTGCCATCAATTGGGCTGGGGGCCTTCACCATGCCAAAAAGTGTGAGGCTTCAGGGTTTTGTTATGTGAATGATATTGTGTTGGCAATTTTGGAACTATTGAAGCAGCATGAGCGGGTTCTGTATGTTGATATTGACATCCACCATGGAGATGGTGTTGAGGAAGCCTTTTACACAACTGACAGGGTTATGACAGTTTCGTTCCATAAGTTTGGCGATTATTTCCCTGGGACAGGTGATATTCGTGATATTGGGTACGGAAAAGGGAAATATTACTCTTTGAATGTGCCTCTGGATGATGGAATTGATGATGACAGCTACCAATTCTTATTTAAGCCGATCATGGCCAAAGTTATGGAAGTTTTTCAACCGGGTGCCGTTGTTTTACAGTGCGGGGCTGACTCCCTATCAGGAGATCGACTAGGTTGCTTCAACCTATCCATCAAAGGCCATGCAGAGTGTGTGAGGTTCATGAGATCATTCAATGTGCCATTGCTCCTCCTCGGCGGCGGTGGGTACACCATTAGGAATGTGGCTAGATGCTGGTGTTATGAGACAGGAGTTGCCATTGGTGTGGAAGTTGATGATAAGATGCCCCAACATGAGTATTATGAGTATTTTGGACCTGACTATACTCTGCATGTTGCCCCGAGTAATATGGAAAACAAAAATTCACGGCAATTAGTTGAGAACATTAAAGTAAAGTCGCTTCAGAATCTCTCCAGGCTTCCACATGCCCCTAGTGTCCCATTTTATGAGCGGCCCCCTGATACTGAGCTTCCTGAGGAAGATGATGACTACGACAGAAAAGAAGAGAGATTGGAAAGCGATCACTTGAATTTGGATACTGAAATGGGTGAATTGAAGCATTCAAATGAGGTTATTTGGTACCCTGACAGGAAGTCTATCCCATCCATCCAAAATATTCGACCAAAGAAAGCAATTGGAGAGGCTGAGCTAAAAGATGAGAATCAGGATGATCGGAAGGAAGTGGTAGAGAATGTTAGATGCATGGATATTGAAACAGAAGAAAACCTTGGCTCAAAGTCTTCAGAACCTGTTCTCGTGGAGACTGACCAGCCAAGGAGCAATATCACTGAGCCATAG
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
