| Tag |
Content |
| WERAM ID |
WERAM-Ran-0087 |
| Ensembl Protein ID |
ENSRNOP00000018423.5 |
| Gene Name |
Hdac1l |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
1.20e-171 |
570.9 |
9 |
322 |
|
| Organism |
Rattus norvegicus |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvg 89
+kv+y+yd dvg+y+ygq+hpmkp+r+++th+L+lnygl++k+ei++p+ka+aee++k+hs++yi+fl++++p+n++e+sk++++fnvg
ENSRNOP00000018423.5 9 RKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVG 97
589************************************************************************************** PP
class-1.txt 90 edcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGD..gve 176
edcPvfdglfe+cql+tG+s+++a kLnk+++dia+nwaGGlh+akkseasGfcyvnDivlailellk+h+rvlyidid+hhGD gve
ENSRNOP00000018423.5 98 EDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHYAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDgdGVE 186
**********************************************************************************75227** PP
class-1.txt 177 eafyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlg 265
eafyttdrvmtvsfhkyge +fPgtGdl+d+ga+kgkyyavn+Pl+dgidDesye+ifk+v+skv+e+f+P+avvlqcG+Dsl+gDrlg
ENSRNOP00000018423.5 187 EAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLG 274
*******************.********************************************************************* PP
class-1.txt 266 efnlsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
+fnl+ikgha+cv+fvksfnlp+l+lGG GYt++nvaRcwtyetav+l
ENSRNOP00000018423.5 275 CFNLTIKGHAKCVEFVKSFNLPMLMLGGDGYTIHNVARCWTYETAVAL 322
*********************************************987 PP
|
Protein Sequence
(Fasta) | MAQTQGTERK VCYYYDGDVG NYYYGQGHPM KPHRIRMTHN LLLNYGLYRK MEIYRPHKAN 60
AEEMTKYHSD DYIKFLRSIR PDNMSEYSKQ MQRFNVGEDC PVFDGLFEFC QLSTGGSVAS 120
AVKLNKQQTD IAVNWAGGLH YAKKSEASGF CYVNDIVLAI LELLKYHQRV LYIDIDIHHG 180
DGDGVEEAFY TTDRVMTVSF HKYGEYFPGT GDLRDIGAGK GKYYAVNYPL RDGIDDESYE 240
AIFKPVMSKV MEMFQPSAVV LQCGSDSLSG DRLGCFNLTI KGHAKCVEFV KSFNLPMLML 300
GGDGYTIHNV ARCWTYETAV ALDTEIPNEL PYNDYFEYFG PDFKLHISPS NMTNQNTNEY 360
LEKIKQRLFE NLRMLPHTPG VQMQAIPEDA IPEESGDEDE EDPDKPISIC SSDKCIACEE 420
EFPDSDEEGE GGRENSSNFK KAKRVKTEDE KEKDPEEKKE VTEEEKTKEE KPEAKGVKEE 480
VKMA 484Protein Fasta Sequence
>ENSRNOP00000018423.5|Class-I|Rattus norvegicus
MAQTQGTERKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHYAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGDGYTIHNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHTPGVQMQAIPEDAIPEESGDEDEEDPDKPISICSSDKCIACEEEFPDSDEEGEGGRENSSNFKKAKRVKTEDEKEKDPEEKKEVTEEEKTKEEKPEAKGVKEEVKMA |
Nucleotide Sequence
(Fasta) | ATGGCGCAGA CTCAGGGCAC CGAGAGGAAA GTCTGTTACT ACTACGACGG GGATGTTGGA 60
AATTACTATT ATGGACAAGG GCACCCAATG AAGCCTCACC GAATCCGAAT GACTCATAAT 120
TTGCTGCTCA ACTATGGTCT CTACCGAAAA ATGGAAATCT ATCGTCCTCA CAAAGCCAAC 180
GCTGAGGAGA TGACCAAGTA CCACAGCGAC GACTACATCA AATTCTTGCG TTCTATTCGC 240
CCAGACAATA TGTCTGAATA CAGCAAGCAG ATGCAGAGAT TCAACGTGGG TGAGGACTGT 300
CCAGTATTTG ATGGCTTGTT TGAGTTCTGT CAGTTGTCCA CGGGTGGCTC TGTCGCGAGT 360
GCTGTGAAAC TCAATAAGCA GCAGACGGAC ATCGCTGTGA ACTGGGCTGG GGGCCTGCAC 420
TATGCAAAGA AGTCTGAAGC ATCTGGCTTC TGTTACGTCA ATGATATCGT CTTGGCCATC 480
CTGGAACTTC TAAAGTACCA CCAGAGGGTG CTGTATATTG ACATTGATAT TCACCATGGC 540
GATGGCGATG GCGTGGAAGA GGCCTTCTAT ACTACAGACC GGGTCATGAC TGTGTCCTTT 600
CATAAATACG GAGAGTACTT CCCAGGAACT GGGGACCTAC GGGATATTGG GGCTGGCAAA 660
GGCAAGTACT ACGCCGTTAA CTACCCACTG CGAGACGGCA TTGATGATGA GTCCTATGAA 720
GCCATCTTCA AGCCAGTCAT GTCCAAAGTA ATGGAGATGT TTCAGCCTAG TGCAGTGGTC 780
CTACAGTGCG GCTCAGACTC CCTGTCTGGG GATCGGCTAG GTTGCTTCAA TCTGACCATC 840
AAAGGACATG CCAAGTGTGT GGAGTTCGTG AAGAGTTTCA ACTTGCCAAT GCTAATGTTG 900
GGAGGAGATG GCTATACCAT CCATAATGTC GCTCGGTGCT GGACTTACGA GACAGCTGTG 960
GCCCTGGACA CAGAGATCCC TAATGAGCTA CCGTACAATG ACTACTTTGA ATACTTTGGA 1020
CCAGATTTCA AGCTTCACAT CAGCCCTTCC AATATGACTA ACCAGAACAC TAATGAATAC 1080
CTGGAGAAGA TCAAGCAGCG GCTCTTTGAG AACTTGAGAA TGCTGCCCCA TACCCCTGGG 1140
GTCCAAATGC AGGCCATCCC TGAGGATGCC ATCCCAGAAG AGAGCGGTGA TGAGGATGAG 1200
GAAGACCCTG ACAAACCAAT TTCCATCTGC TCCTCTGACA AATGCATTGC CTGTGAGGAG 1260
GAATTCCCTG ATTCTGATGA GGAGGGAGAA GGAGGTCGAG AGAACTCTTC TAACTTCAAA 1320
AAAGCCAAAA GAGTCAAAAC AGAAGATGAA AAAGAAAAAG ATCCCGAGGA GAAAAAAGAA 1380
GTCACAGAAG AGGAGAAAAC CAAGGAGGAG AAGCCAGAAG CCAAAGGGGT CAAAGAAGAG 1440
GTCAAGATGG CCTGA
1456Nucleotide Fasta Sequence
>ENSRNOP00000018423.5|Class-I|Rattus norvegicus
ATGGCGCAGACTCAGGGCACCGAGAGGAAAGTCTGTTACTACTACGACGGGGATGTTGGAAATTACTATTATGGACAAGGGCACCCAATGAAGCCTCACCGAATCCGAATGACTCATAATTTGCTGCTCAACTATGGTCTCTACCGAAAAATGGAAATCTATCGTCCTCACAAAGCCAACGCTGAGGAGATGACCAAGTACCACAGCGACGACTACATCAAATTCTTGCGTTCTATTCGCCCAGACAATATGTCTGAATACAGCAAGCAGATGCAGAGATTCAACGTGGGTGAGGACTGTCCAGTATTTGATGGCTTGTTTGAGTTCTGTCAGTTGTCCACGGGTGGCTCTGTCGCGAGTGCTGTGAAACTCAATAAGCAGCAGACGGACATCGCTGTGAACTGGGCTGGGGGCCTGCACTATGCAAAGAAGTCTGAAGCATCTGGCTTCTGTTACGTCAATGATATCGTCTTGGCCATCCTGGAACTTCTAAAGTACCACCAGAGGGTGCTGTATATTGACATTGATATTCACCATGGCGATGGCGATGGCGTGGAAGAGGCCTTCTATACTACAGACCGGGTCATGACTGTGTCCTTTCATAAATACGGAGAGTACTTCCCAGGAACTGGGGACCTACGGGATATTGGGGCTGGCAAAGGCAAGTACTACGCCGTTAACTACCCACTGCGAGACGGCATTGATGATGAGTCCTATGAAGCCATCTTCAAGCCAGTCATGTCCAAAGTAATGGAGATGTTTCAGCCTAGTGCAGTGGTCCTACAGTGCGGCTCAGACTCCCTGTCTGGGGATCGGCTAGGTTGCTTCAATCTGACCATCAAAGGACATGCCAAGTGTGTGGAGTTCGTGAAGAGTTTCAACTTGCCAATGCTAATGTTGGGAGGAGATGGCTATACCATCCATAATGTCGCTCGGTGCTGGACTTACGAGACAGCTGTGGCCCTGGACACAGAGATCCCTAATGAGCTACCGTACAATGACTACTTTGAATACTTTGGACCAGATTTCAAGCTTCACATCAGCCCTTCCAATATGACTAACCAGAACACTAATGAATACCTGGAGAAGATCAAGCAGCGGCTCTTTGAGAACTTGAGAATGCTGCCCCATACCCCTGGGGTCCAAATGCAGGCCATCCCTGAGGATGCCATCCCAGAAGAGAGCGGTGATGAGGATGAGGAAGACCCTGACAAACCAATTTCCATCTGCTCCTCTGACAAATGCATTGCCTGTGAGGAGGAATTCCCTGATTCTGATGAGGAGGGAGAAGGAGGTCGAGAGAACTCTTCTAACTTCAAAAAAGCCAAAAGAGTCAAAACAGAAGATGAAAAAGAAAAAGATCCCGAGGAGAAAAAAGAAGTCACAGAAGAGGAGAAAACCAAGGAGGAGAAGCCAGAAGCCAAAGGGGTCAAAGAAGAGGTCAAGATGGCCTGA
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
