WERAM Information

Tag Content
WERAM ID WERAM-Orc-0030
Ensembl Protein ID ENSOCUP00000003186.2
Gene Name HDAC1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSOCUG00000003674.2 ENSOCUT00000003675.2 ENSOCUP00000003186.2
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 1.10e-176 586.9 9 320
Organism Oryctolagus cuniculus
Domain Profile
  HDAC Class-I
           class-1.txt   1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvg 89 
                           +kv+y+yd dvg+y+ygq+hpmkp+r+++th+L+lnygl++k+ei++p+ka+aee++k+hs++yi+fl++++p+n++e+sk++++fnvg
  ENSOCUP00000003186.2   9 RKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVG 97 
                           589************************************************************************************** PP
           class-1.txt  90 edcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveea 178
                           edcPvfdglfe+cql+tG+s+++a kLnk+++dia+nwaGGlhhakkseasGfcyvnDivlailellk+h+rvlyidid+hhGDgveea
  ENSOCUP00000003186.2  98 EDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186
                           ***************************************************************************************** PP
           class-1.txt 179 fyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgef 267
                           fyttdrvmtvsfhkyge +fPgtGdl+d+ga+kgkyyavn+Pl+dgidDesye+ifk+v+skv+e+f+P+avvlqcG+Dsl+gDrlg+f
  ENSOCUP00000003186.2 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCF 274
                           *****************.*********************************************************************** PP
           class-1.txt 268 nlsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
                           nl+ikgha+cv+fvksfnlp+l+lGGGGYt+rnvaRcwtyetav+l
  ENSOCUP00000003186.2 275 NLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVAL 320
                           *******************************************987 PP
Protein Sequence
(Fasta)		MAQTQGTRRK VCYYYDGDVG NYYYGQGHPM KPHRIRMTHN LLLNYGLYRK MEIYRPHKAN 60
AEEMTKYHSD DYIKFLRSIR PDNMSEYSKQ MQRFNVGEDC PVFDGLFEFC QLSTGGSVAS 120
AVKLNKQQTD IAVNWAGGLH HAKKSEASGF CYVNDIVLAI LELLKYHQRV LYIDIDIHHG 180
DGVEEAFYTT DRVMTVSFHK YGEYFPGTGD LRDIGAGKGK YYAVNYPLRD GIDDESYEAI 240
FKPVMSKVME MFQPSAVVLQ CGSDSLSGDR LGCFNLTIKG HAKCVEFVKS FNLPMLMLGG 300
GGYTIRNVAR CWTYETAVAL DTEIPNELPY NDYFEYFGPD FKLHISPSNM TNQNTNEYLE 360
KIKQRLFENL RMLPHAPGVQ MQAIPEDAIP EESGDEDEED PDKRISICSS DKRIACEEEF 420
SDSDEEGEGG RKNSSNFKKA KRVKTEDEKD KDAEEKKEVA EEEKTKEEKP EAKGVKEEVK 480
LA 482
Nucleotide Sequence
(Fasta)		ATGGCGCAGA CTCAGGGCAC CAGGAGGAAA GTCTGTTACT ACTACGACGG TGATGTTGGG 60
AATTACTACT ATGGACAAGG CCATCCAATG AAGCCTCACC GGATCCGCAT GACTCACAAC 120
TTGCTGCTCA ACTATGGTCT CTACCGGAAA ATGGAAATCT ATCGCCCTCA CAAAGCCAAT 180
GCTGAGGAGA TGACCAAGTA CCACAGTGAC GACTACATTA AGTTCTTGCG CTCCATTCGT 240
CCGGATAACA TGTCCGAGTA CAGCAAGCAG ATGCAGCGAT TCAACGTTGG TGAGGACTGT 300
CCAGTATTTG ATGGCCTGTT TGAATTTTGT CAGTTGTCTA CTGGTGGCTC TGTAGCAAGT 360
GCTGTGAAAC TTAATAAGCA GCAGACGGAC ATCGCTGTGA ATTGGGCTGG GGGCCTGCAC 420
CATGCAAAGA AGTCCGAGGC ATCTGGCTTC TGTTACGTCA ATGATATCGT CTTGGCCATC 480
CTGGAACTGC TAAAGTATCA CCAGAGGGTG CTGTATATTG ACATTGATAT TCACCACGGC 540
GATGGCGTGG AAGAGGCCTT CTATACCACA GACCGGGTCA TGACCGTGTC CTTTCATAAG 600
TATGGAGAGT ACTTCCCAGG AACTGGGGAC CTACGGGATA TTGGGGCTGG CAAAGGCAAA 660
TATTATGCTG TTAACTACCC GCTCCGAGAT GGGATTGACG ACGAGTCCTA TGAAGCCATT 720
TTCAAGCCGG TCATGTCCAA AGTGATGGAG ATGTTCCAGC CTAGCGCCGT GGTCTTACAG 780
TGTGGCTCAG ACTCCCTGTC TGGGGATCGG CTGGGTTGCT TCAATCTGAC CATCAAAGGG 840
CACGCCAAGT GTGTGGAATT TGTCAAGAGC TTCAACCTGC CCATGCTGAT GCTGGGAGGA 900
GGCGGTTACA CCATCCGCAA TGTCGCCCGG TGCTGGACAT ACGAAACCGC CGTGGCCCTG 960
GACACAGAGA TCCCTAATGA GCTTCCATAC AATGACTACT TCGAATACTT TGGGCCAGAT 1020
TTCAAGCTTC ACATCAGTCC TTCCAATATG ACGAACCAGA ACACTAATGA GTATCTGGAA 1080
AAGATCAAAC AGCGGCTGTT CGAGAACCTG AGGATGCTGC CGCACGCGCC TGGGGTCCAA 1140
ATGCAGGCGA TTCCTGAGGA TGCCATCCCG GAGGAGAGTG GCGATGAGGA TGAAGAAGAC 1200
CCTGACAAGC GCATCTCGAT CTGTTCCTCT GACAAACGAA TTGCCTGTGA GGAGGAGTTT 1260
TCCGACTCCG ATGAGGAGGG AGAGGGCGGG CGCAAGAATT CTTCCAACTT CAAGAAAGCC 1320
AAGAGAGTCA AAACAGAAGA TGAAAAAGAC AAAGATGCTG AAGAGAAGAA AGAAGTCGCA 1380
GAAGAGGAGA AAACCAAGGA GGAGAAGCCA GAAGCCAAAG GGGTCAAAGA GGAGGTCAAG 1440
CTGGCCTGAG CAGACTTCTC CAGATCTGGC TCCTGGCCAG CTTTCCCACC TTTCTCCCTT 1500
AACCCCTCAA GATTTTATAT TTTCTATTTC TGTGTATTTA TATAAAAATA TATTAAATAT 1560
AAATATCCCT GAGGACTAGA CAAGAACCAA GGCCCTGAGG CCAGGGTAGC CAAGCTGGGT 1620
AAACTCATAG CCGCTGCCCT GCCAGCCATC CCTCCCCAGT TCGATTTTAA ACCACGAAGG 1680
GCTCCAGGTG TGGGTAGAAG GGAGCTACAA GACACGCCGG GGTGTGTCCC TAGCAGGTAT 1740
GGAAAGGTGC CCCCTGTTGA CCATTCTAGG AGGGTAGGGG TGGCTGGGTC TTCAGGGACT 1800
TCCTGTTCTT TCCAGCCCCT AAGGTAACGT TAGCCATTTT 1841
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Otg-0072 ENSOGAP00000005101.2 Otolemur garnettii 99 0.0 832
WERAM-Hos-0092 ENSP00000362649.3 Homo sapiens 99 0.0 832
WERAM-Gog-0132 ENSGGOP00000011454.2 Gorilla gorilla 99 0.0 832
WERAM-Nol-0026 ENSNLEP00000003167.1 Nomascus leucogenys 99 0.0 831
WERAM-Mum-0093 ENSMUSP00000099657.4 Mus musculus 99 0.0 831
WERAM-Ptv-0152 ENSPVAP00000012567.1 Pteropus vampyrus 98 0.0 830
WERAM-Ova-0221 ENSOARP00000022517.1 Ovis aries 99 0.0 830
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 99 0.0 830
WERAM-Ran-0062 ENSRNOP00000012854.5 Rattus norvegicus 99 0.0 830
WERAM-Cap-0092 ENSCPOP00000006985.2 Cavia porcellus 99 0.0 828
WERAM-Mup-0173 ENSMPUP00000015122.1 Mustela putorius furo 99 0.0 828
WERAM-Poa-0013 ENSPPYP00000001838.2 Pongo abelii 98 0.0 827
WERAM-Caf-0116 ENSCAFP00000015619.3 Canis familiaris 99 0.0 825
WERAM-Ocp-0006 ENSOPRP00000000780.1 Ochotona princeps 99 0.0 825
WERAM-Myl-0152 ENSMLUP00000012593.2 Myotis lucifugus 99 0.0 820
WERAM-Loa-0056 ENSLAFP00000004079.2 Loxodonta africana 98 0.0 819
WERAM-Dan-0175 ENSDNOP00000033349.1 Dasypus novemcinctus 99 0.0 819
WERAM-Aim-0087 ENSAMEP00000008076.1 Ailuropoda melanoleuca 98 0.0 817
WERAM-Chs-0011 ENSCSAP00000016960.1 Chlorocebus sabaeus 99 0.0 815
WERAM-Pat-0210 ENSPTRP00000060659.1 Pan troglodytes 99 0.0 814
WERAM-Eqc-0125 ENSECAP00000014039.1 Equus caballus 98 0.0 810
WERAM-Fec-0127 ENSFCAP00000011581.3 Felis catus 99 0.0 808
WERAM-Sus-0201 ENSSSCP00000023024.1 Sus scrofa 98 0.0 806
WERAM-Gaga-0034 ENSGALP00000005212.3 Gallus gallus 96 0.0 805
WERAM-Tag-0022 ENSTGUP00000001473.1 Taeniopygia guttata 95 0.0 803
WERAM-Anc-0033 ENSACAP00000004062.3 Anolis carolinensis 95 0.0 801
WERAM-Anp-0136 ENSAPLP00000014652.1 Anas platyrhynchos 96 0.0 790
WERAM-Meg-0047 ENSMGAP00000004521.2 Meleagris gallopavo 96 0.0 787
WERAM-Fia-0005 ENSFALP00000000658.1 Ficedula albicollis 95 0.0 784
WERAM-Pes-0020 ENSPSIP00000004435.1 Pelodiscus sinensis 94 0.0 780
WERAM-Mod-0160 ENSMODP00000021783.2 Monodelphis domestica 96 0.0 775
WERAM-Xet-0037 ENSXETP00000011480.3 Xenopus tropicalis 93 0.0 771
WERAM-Leo-0014 ENSLOCP00000002993.1 Lepisosteus oculatus 93 0.0 771
WERAM-Tar-0062 ENSTRUP00000012875.1 Takifugu rubripes 93 0.0 762
WERAM-Gam-0211 ENSGMOP00000020496.1 Gadus morhua 92 0.0 759
WERAM-Dar-0035 ENSDARP00000051798.4 Danio rerio 92 0.0 758
WERAM-Orn-0090 ENSONIP00000010308.1 Oreochromis niloticus 92 0.0 758
WERAM-Gaa-0072 ENSGACP00000009568.1 Gasterosteus aculeatus 92 0.0 756
WERAM-Mam-0083 ENSMMUP00000013015.2 Macaca mulatta 99 0.0 756
WERAM-Tut-0018 ENSTTRP00000001520.1 Tursiops truncatus 99 0.0 755
WERAM-Orla-0192 ENSORLP00000021872.1 Oryzias latipes 93 0.0 753
WERAM-Xim-0229 ENSXMAP00000019038.1 Xiphophorus maculatus 91 0.0 751
WERAM-Pof-0034 ENSPFOP00000002952.2 Poecilia formosa 91 0.0 751
WERAM-Asm-0120 ENSAMXP00000012237.1 Astyanax mexicanus 91 0.0 748
WERAM-Ten-0200 ENSTNIP00000020022.1 Tetraodon nigroviridis 93 0.0 746
WERAM-Paa-0030 ENSPANP00000015145.1 Papio anubis 90 0.0 739
WERAM-Ict-0111 ENSSTOP00000011457.2 Ictidomys tridecemlineatus 90 0.0 739
WERAM-Prc-0059 ENSPCAP00000005589.1 Procavia capensis 92 0.0 738
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 90 0.0 736
WERAM-Ere-0068 ENSEEUP00000005465.1 Erinaceus europaeus 91 0.0 736
WERAM-Sah-0134 ENSSHAP00000014467.1 Sarcophilus harrisii 91 0.0 736
WERAM-Caj-0052 ENSCJAP00000008409.2 Callithrix jacchus 91 0.0 731
WERAM-Ora-0034 ENSOANP00000005760.2 Ornithorhynchus anatinus 91 0.0 728
WERAM-Tas-0085 ENSTSYP00000008588.1 Tarsius syrichta 89 0.0 717
WERAM-Drm-0018 FBpp0073173 Drosophila melanogaster 82 0.0 707
WERAM-Cii-0014 ENSCINP00000005410.3 Ciona intestinalis 89 0.0 705
WERAM-Dio-0132 ENSDORP00000012520.1 Dipodomys ordii 84 0.0 669
WERAM-Mae-0030 ENSMEUP00000002192.1 Macropus eugenii 86 0.0 662
WERAM-Mim-0092 ENSMICP00000008598.1 Microcebus murinus 87 0.0 659
WERAM-Vip-0012 ENSVPAP00000001394.1 Vicugna pacos 81 0.0 657
WERAM-Tub-0143 ENSTBEP00000015305.1 Tupaia belangeri 90 0.0 637
WERAM-Pem-0096 ENSPMAP00000010023.1 Petromyzon marinus 81 0.0 631
WERAM-Cae-0005 C53A5.3 Caenorhabditis elegans 71 1e-166 583
WERAM-Soa-0003 ENSSARP00000000316.1 Sorex araneus 80 4e-165 578
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 69 8e-165 577
WERAM-Asc-0037 CADACLAP00008612 Aspergillus clavatus 69 3e-163 572
WERAM-Asfu-0015 CADAFUAP00003503 Aspergillus fumigatus 69 6e-163 571
WERAM-Asni-0020 CADANGAP00005938 Aspergillus niger 68 1e-162 570
WERAM-Asn-0024 CADANIAP00005952 Aspergillus nidulans 68 1e-162 570
WERAM-Brd-0020 BRADI1G37290.1 Brachypodium distachyon 69 3e-162 569
WERAM-Chh-0084 ENSCHOP00000009394.1 Choloepus hoffmanni 73 3e-162 569
WERAM-Coi-0024 EAS33504 Coccidioides immitis 68 4e-162 568
WERAM-Tra-0318 Traes_7DL_578CF3F0D.2 Triticum aestivum 69 6e-162 568
WERAM-Php-0088 PP1S351_29V6.1 Physcomitrella patens 68 1e-161 566
WERAM-Map-0015 MAPG_05105T0 Magnaporthe poae 69 1e-159 560
WERAM-Gag-0026 GGTG_08607T0 Gaeumannomyces graminis 69 2e-159 559
WERAM-Osl-0002 ABO94711 Ostreococcus lucimarinus 69 2e-159 559
WERAM-Sem-0128 EFJ38890 Selaginella moellendorffii 68 4e-159 558
WERAM-Scs-0023 EDO03342 Sclerotinia sclerotiorum 67 4e-159 558
WERAM-Ved-0020 EGY15146 Verticillium dahliae 67 1e-158 557
WERAM-Hov-0001 MLOC_10109.1 Hordeum vulgare 69 4e-158 555
WERAM-Prp-0060 EMJ10303 Prunus persica 68 7e-158 554
WERAM-Amt-0072 ERN20455 Amborella trichopoda 67 1e-157 553
WERAM-Viv-0108 VIT_17s0000g09070.t01 Vitis vinifera 67 1e-157 553
WERAM-Trv-0003 EHK19072 Trichoderma virens 68 1e-157 553
WERAM-Tum-0029 CAZ85499 Tuber melanosporum 68 2e-157 553
WERAM-Mao-0017 MGG_05857T0 Magnaporthe oryzae 68 6e-157 551
WERAM-Orb-0066 OBART06G19560.1 Oryza barthii 69 9e-157 550
WERAM-Ori-0039 BGIOSGA012324-PA Oryza indica 69 1e-156 550
WERAM-Ors-0059 OS06T0583400-01 Oryza sativa 69 1e-156 550
WERAM-Orr-0068 ORUFI06G20660.1 Oryza rufipogon 69 1e-156 550
WERAM-Glm-0046 GLYMA05G02540.1 Glycine max 67 2e-156 549
WERAM-Orgl-0064 OGLUM06G20570.1 Oryza glumaepatula 69 2e-156 549
WERAM-Orp-0064 OPUNC06G17670.1 Oryza punctata 69 2e-156 549
WERAM-Orbr-0074 OB06G27130.1 Oryza brachyantha 69 2e-156 549
WERAM-Trr-0017 EGR48353 Trichoderma reesei 68 4e-156 548
WERAM-Zyt-0024 Mycgr3P51809 Zymoseptoria tritici 67 1e-155 546
WERAM-Caa-0018 KGT69072 Candida albicans 65 1e-155 546
WERAM-Thc-0029 EOY20838 Theobroma cacao 66 1e-155 546
WERAM-Met-0084 KEH36404 Medicago truncatula 69 2e-155 546
WERAM-Sob-0135 Sb10g022820.1 Sorghum bicolor 69 2e-155 546
WERAM-Sei-0026 Si006243m Setaria italica 69 3e-155 545
WERAM-Brr-0180 Bra035858.1-P Brassica rapa 66 3e-155 545
WERAM-Orm-0063 OMERI06G19730.1 Oryza meridionalis 69 5e-155 545
WERAM-Kop-0004 CAY67954 Komagataella pastoris 66 6e-155 544
WERAM-Bro-0169 Bo9g017510.1 Brassica oleracea 66 8e-155 544
WERAM-Zem-0056 GRMZM2G081474_P01 Zea mays 69 8e-155 544
WERAM-Kll-0018 CAG99124 Kluyveromyces lactis 66 9e-155 544
WERAM-Orni-0065 ONIVA06G23170.1 Oryza nivara 69 9e-155 544
WERAM-Yal-0022 CAG79885 Yarrowia lipolytica 66 1e-154 543
WERAM-Pot-0149 POPTR_0015s09400.1 Populus trichocarpa 66 3e-154 542
WERAM-Cag-0003 CAG57932 Candida glabrata 66 4e-154 541
WERAM-Sot-0088 PGSC0003DMT400076252 Solanum tuberosum 69 6e-154 541
WERAM-Asg-0034 AAS54885 Ashbya gossypii 65 8e-154 541
WERAM-Aet-0051 EMT16627 Aegilops tauschii 68 1e-153 540
WERAM-Sol-0120 Solyc09g091440.2.1 Solanum lycopersicum 68 1e-153 540
WERAM-Lep-0066 LPERR06G16070.1 Leersia perrieri 69 2e-153 539
WERAM-Art-0148 AT5G63110.1 Arabidopsis thaliana 66 2e-153 539
WERAM-Ast-0010 CADATEAP00004306 Aspergillus terreus 66 2e-153 539
WERAM-Arl-0113 fgenesh2_kg.8__ 2309__ AT5G63110.1 Arabidopsis lyrata 66 2e-153 539
WERAM-Chg-0005 EAQ93036 Chaetomium globosum 62 2e-153 539
WERAM-Sac-0039 YNL330C Saccharomyces cerevisiae 65 2e-151 533
WERAM-Phn-0005 SNOT_00508 Phaeosphaeria nodorum 67 3e-151 532
WERAM-Pyt-0025 EFQ89270 Pyrenophora teres 64 1e-150 530
WERAM-Lem-0026 CBX91288 Leptosphaeria maculans 67 2e-150 529
WERAM-Scp-0033 SPBC36.05c.1:pep Schizosaccharomyces pombe 65 4e-150 528
WERAM-Lac-0087 ENSLACP00000011092.1 Latimeria chalumnae 64 4e-150 528
WERAM-Pytr-0033 EDU43668 Pyrenophora triticirepentis 66 1e-149 527
WERAM-Spr-0005 CBQ70764 Sporisorium reilianum 62 4e-149 525
Created Date 25-Jun-2016