| Tag |
Content |
| WERAM ID |
WERAM-Cap-0092 |
| Ensembl Protein ID |
ENSCPOP00000006985.2 |
| Gene Name |
HDAC1 |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
1.10e-176 |
586.9 |
9 |
320 |
|
| Organism |
Cavia porcellus |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvg 89
+kv+y+yd dvg+y+ygq+hpmkp+r+++th+L+lnygl++k+ei++p+ka+aee++k+hs++yi+fl++++p+n++e+sk++++fnvg
ENSCPOP00000006985.2 9 RKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVG 97
589************************************************************************************** PP
class-1.txt 90 edcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveea 178
edcPvfdglfe+cql+tG+s+++a kLnk+++dia+nwaGGlhhakkseasGfcyvnDivlailellk+h+rvlyidid+hhGDgveea
ENSCPOP00000006985.2 98 EDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186
***************************************************************************************** PP
class-1.txt 179 fyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgef 267
fyttdrvmtvsfhkyge +fPgtGdl+d+ga+kgkyyavn+Pl+dgidDesye+ifk+v+skv+e+f+P+avvlqcG+Dsl+gDrlg+f
ENSCPOP00000006985.2 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCF 274
*****************.*********************************************************************** PP
class-1.txt 268 nlsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
nl+ikgha+cv+fvksfnlp+l+lGGGGYt+rnvaRcwtyetav+l
ENSCPOP00000006985.2 275 NLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVAL 320
*******************************************987 PP
|
Protein Sequence
(Fasta) | MAQTQGTRRK VCYYYDGDVG NYYYGQGHPM KPHRIRMTHN LLLNYGLYRK MEIYRPHKAN 60
AEEMTKYHSD DYIKFLRSIR PDNMSEYSKQ MQRFNVGEDC PVFDGLFEFC QLSTGGSVAS 120
AVKLNKQQTD IAVNWAGGLH HAKKSEASGF CYVNDIVLAI LELLKYHQRV LYIDIDIHHG 180
DGVEEAFYTT DRVMTVSFHK YGEYFPGTGD LRDIGAGKGK YYAVNYPLRD GIDDESYEAI 240
FKPVMSKVME MFQPSAVVLQ CGSDSLSGDR LGCFNLTIKG HAKCVEFVKS FNLPMLMLGG 300
GGYTIRNVAR CWTYETAVAL DTEIPNELPY NDYFEYFGPD FKLHISPSNM TNQNTNEYLE 360
KIKQRLFENL RMLPHAPGVQ MQAIPEDAIP EESGDEDEED PDKRISICSS DKRIACEEEF 420
SDSDEEGEGG RKNSSNYKKA KRVKTEDEKE KDPEEKKEVT EEEKTKEEKP EAKGVKEEVK 480
L 481Protein Fasta Sequence
>ENSCPOP00000006985.2|Class-I|Cavia porcellus
MAQTQGTRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPEDAIPEESGDEDEEDPDKRISICSSDKRIACEEEFSDSDEEGEGGRKNSSNYKKAKRVKTEDEKEKDPEEKKEVTEEEKTKEEKPEAKGVKEEVKL |
Nucleotide Sequence
(Fasta) | ATGGCGCAGA CTCAGGGCAC AAGGAGGAAA GTCTGTTACT ACTACGACGG GGATGTTGGA 60
AATTACTATT ATGGACAAGG CCATCCAATG AAGCCTCACC GAATCCGCAT GACTCACAAT 120
TTGCTGCTCA ACTATGGTCT CTACCGAAAG ATGGAAATCT ATCGCCCTCA CAAAGCCAAT 180
GCTGAGGAGA TGACCAAGTA CCACAGTGAT GACTACATTA AATTCTTACG CTCCATCCGT 240
CCAGATAACA TGTCTGAGTA CAGCAAGCAG ATGCAGAGAT TCAACGTTGG TGAGGACTGT 300
CCAGTGTTTG ATGGCCTGTT TGAGTTCTGT CAGTTGTCCA CTGGTGGCTC TGTGGCAAGT 360
GCCGTGAAAC TCAATAAGCA GCAGACGGAC ATCGCTGTGA ATTGGGCTGG GGGACTGCAC 420
CACGCAAAGA AGTCCGAGGC ATCTGGCTTC TGTTACGTCA ATGATATCGT CCTGGCCATC 480
CTGGAACTGC TAAAGTATCA CCAGAGAGTG CTGTATATTG ACATTGATAT TCACCACGGC 540
GATGGCGTGG AAGAGGCCTT CTATACCACC GACCGGGTCA TGACCGTGTC CTTTCATAAA 600
TATGGAGAGT ACTTCCCAGG AACTGGGGAC CTACGGGATA TCGGGGCTGG CAAGGGCAAG 660
TATTATGCTG TTAACTACCC ACTCCGAGAT GGAATTGATG ACGAGTCTTA TGAGGCCATT 720
TTTAAGCCGG TGATGTCGAA AGTAATGGAA ATGTTCCAGC CTAGTGCCGT GGTCTTACAG 780
TGTGGCTCAG ACTCCCTCTC TGGGGATCGG CTGGGTTGCT TCAATCTGAC CATCAAAGGG 840
CATGCCAAGT GTGTGGAATT TGTCAAAAGC TTCAACTTGC CTATGCTGAT GCTGGGAGGT 900
GGTGGTTATA CCATTCGTAA TGTTGCCCGG TGCTGGACGT ACGAAACCGC TGTGGCTCTA 960
GACACCGAGA TCCCTAACGA ACTTCCATAC AATGACTACT TCGAATACTT CGGACCGGAT 1020
TTCAAGCTTC ACATCAGCCC TTCCAATATG ACTAACCAGA ACACTAACGA GTACCTGGAG 1080
AAGATCAAAC AGCGGCTCTT TGAGAACCTG AGAATGCTGC CCCATGCACC TGGGGTCCAA 1140
ATGCAGGCAA TTCCGGAGGA CGCCATTCCT GAGGAGAGTG GTGATGAGGA TGAAGAAGAC 1200
CCTGACAAGC GCATCTCAAT CTGTTCCTCT GACAAACGGA TTGCCTGTGA GGAAGAGTTC 1260
TCTGACTCGG ATGAAGAAGG AGAAGGTGGC CGCAAGAACT CTTCCAACTA CAAGAAAGCC 1320
AAAAGAGTCA AAACAGAAGA TGAGAAAGAG AAAGATCCAG AAGAGAAGAA AGAGGTGACA 1380
GAAGAGGAAA AAACCAAGGA GGAGAAGCCA GAAGCCAAAG GGGTCAAAGA GGAGGTCAAG 1440
TTG
1444Nucleotide Fasta Sequence
>ENSCPOP00000006985.2|Class-I|Cavia porcellus
ATGGCGCAGACTCAGGGCACAAGGAGGAAAGTCTGTTACTACTACGACGGGGATGTTGGAAATTACTATTATGGACAAGGCCATCCAATGAAGCCTCACCGAATCCGCATGACTCACAATTTGCTGCTCAACTATGGTCTCTACCGAAAGATGGAAATCTATCGCCCTCACAAAGCCAATGCTGAGGAGATGACCAAGTACCACAGTGATGACTACATTAAATTCTTACGCTCCATCCGTCCAGATAACATGTCTGAGTACAGCAAGCAGATGCAGAGATTCAACGTTGGTGAGGACTGTCCAGTGTTTGATGGCCTGTTTGAGTTCTGTCAGTTGTCCACTGGTGGCTCTGTGGCAAGTGCCGTGAAACTCAATAAGCAGCAGACGGACATCGCTGTGAATTGGGCTGGGGGACTGCACCACGCAAAGAAGTCCGAGGCATCTGGCTTCTGTTACGTCAATGATATCGTCCTGGCCATCCTGGAACTGCTAAAGTATCACCAGAGAGTGCTGTATATTGACATTGATATTCACCACGGCGATGGCGTGGAAGAGGCCTTCTATACCACCGACCGGGTCATGACCGTGTCCTTTCATAAATATGGAGAGTACTTCCCAGGAACTGGGGACCTACGGGATATCGGGGCTGGCAAGGGCAAGTATTATGCTGTTAACTACCCACTCCGAGATGGAATTGATGACGAGTCTTATGAGGCCATTTTTAAGCCGGTGATGTCGAAAGTAATGGAAATGTTCCAGCCTAGTGCCGTGGTCTTACAGTGTGGCTCAGACTCCCTCTCTGGGGATCGGCTGGGTTGCTTCAATCTGACCATCAAAGGGCATGCCAAGTGTGTGGAATTTGTCAAAAGCTTCAACTTGCCTATGCTGATGCTGGGAGGTGGTGGTTATACCATTCGTAATGTTGCCCGGTGCTGGACGTACGAAACCGCTGTGGCTCTAGACACCGAGATCCCTAACGAACTTCCATACAATGACTACTTCGAATACTTCGGACCGGATTTCAAGCTTCACATCAGCCCTTCCAATATGACTAACCAGAACACTAACGAGTACCTGGAGAAGATCAAACAGCGGCTCTTTGAGAACCTGAGAATGCTGCCCCATGCACCTGGGGTCCAAATGCAGGCAATTCCGGAGGACGCCATTCCTGAGGAGAGTGGTGATGAGGATGAAGAAGACCCTGACAAGCGCATCTCAATCTGTTCCTCTGACAAACGGATTGCCTGTGAGGAAGAGTTCTCTGACTCGGATGAAGAAGGAGAAGGTGGCCGCAAGAACTCTTCCAACTACAAGAAAGCCAAAAGAGTCAAAACAGAAGATGAGAAAGAGAAAGATCCAGAAGAGAAGAAAGAGGTGACAGAAGAGGAAAAAACCAAGGAGGAGAAGCCAGAAGCCAAAGGGGTCAAAGAGGAGGTCAAGTTG
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
