Tag |
Content |
WERAM ID |
WERAM-Cap-0062 |
Ensembl Protein ID |
ENSCPOP00000004924.2 |
Gene Name |
HDAC9 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
9.00e-145 |
481.8 |
48 |
973 |
HDAC |
Class-I |
7.70e-32 |
111.1 |
48 |
942 |
|
Organism |
Cavia porcellus |
Domain Profile |
HDAC Class-II
class-2.txt 32 ailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeele 83 + l +q+++ ++k + +++ ++++e+l+ H++++ e+++ +++l + + ENSCPOP00000004924.2 48 QELLLIQQQQQIQKQLLIAEFQKQHENLTRQHQAQLQEHIKLQQELLAIKQQ 99 4445566666666667777777777777777766666666555543333222 PP class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeeles...... 84 +g+ yd+ mlkhq++++n+++hpE+++Riq+i+srlqe+gll+k+e++++rka++ee+qlvHse+h l++t+ +l+ ++l+ ENSCPOP00000004924.2 632 TGIAYDPLMLKHQCICGNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQLVHSEHHSLLYGTS-PLDGQKLDPrillgd 719 789*********************************************************************9.*************** PP class-2.txt 85 .............ltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqkl 160 l+vdsd+i++e +s+ aar+avG+v+el++kv++gelkngfavvRPPGHHaees+amGFC+fn+va++ak+l+++l ENSCPOP00000004924.2 720 dsqkffsslpcggLGVDSDTIWNELHSSGAARMAVGCVIELASKVASGELKNGFAVVRPPGHHAEESAAMGFCFFNSVAITAKYLRDQL 808 ***************************************************************************************** PP class-2.txt 161 kvkkilivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawnggl...mgdaeylaafrevvl 246 +++kilivD+DvHhGnGtq++fy dp++ly+SlHRyd+g+ffp gsga++evg+g geg+n+N+aw+ggl mgd eyl afr+vv+ ENSCPOP00000004924.2 809 NISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFP--GSGAPNEVGTGLGEGYNINIAWTGGLdppMGDVEYLEAFRTVVM 895 *******************************************..******************************************** PP class-2.txt 247 piakeFkPdlvlvsaGfDaaeg..dplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322 p+akeF+P++vlvsaGfDa eg plgg++vtakc+++ltkql++l +grvvl+lEGG++l+ai++a+ea+v+aLlg ENSCPOP00000004924.2 896 PVAKEFDPNMVLVSAGFDALEGhtPPLGGYKVTAKCFGHLTKQLMTLVDGRVVLALEGGHDLTAICDASEACVNALLG 973 **********************9889**************************************************96 PP
HDAC Class-I
class-1.txt 18 qkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhse 62 q+ ++++ ++ ++L+++ +++ ++++ ++a+ +e +k ++e ENSCPOP00000004924.2 48 QELLLIQQQQQIQKQLLIAEFQKQHENLTRQHQAQLQEHIKLQQE 92 444444555555555555544555555555566665555555443 PP class-1.txt 19 khpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenae............elskelkkfnvgedc.Pv 94 +hp r++ + + + + gl +k e+++ +kas ee++ +hse++ + ++ + ++ ++ ++l ++g d+ + ENSCPOP00000004924.2 652 THPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQLVHSEHHSLLYGTSPLDGQKldprillgddsqKFFSSLPCGGLGVDSdTI 740 56666667777777777777777777777777777777777776654443333333333445544444333333333333455555236 PP class-1.txt 95 fdglfey..cqlitGasleaakkLnkkead..iainwaGGlhhakkseasGfcyvnDivlailellk..khkrvlyididlhhGDgvee 177 ++l++ +++ G +e a+k+ ++e + a+ G hha s a Gfc+ n + ++ l+ + +++l +d+d+hhG+g ++ ENSCPOP00000004924.2 741 WNELHSSgaARMAVGCVIELASKVASGELKngFAVVRPPG-HHAEESAAMGFCFFNSVAITAKYLRDqlNISKILIVDLDVHHGNGTQQ 828 6777764225677899999999999887661245554444.************************9944567***************** PP class-1.txt 178 afyttdrvmtvsfhkyge.effPgtGdlsdvgaekgkyyavnvPlkdgid....DesyekifksviskvieafePeavvlqcGaDslag 261 afy+ ++ +s+h+y+e +ffPg+G ++vg++ g y +n+ + g+d D +y + f++v+ +v + f+P++v++ G D+l g ENSCPOP00000004924.2 829 AFYADPSILYISLHRYDEgNFFPGSGAPNEVGTGLGEGYNINIAWTGGLDppmgDVEYLEAFRTVVMPVAKEFDPNMVLVSAGFDALEG 917 ****************8746***********************998887655559********************************97 PP class-1.txt 262 D..rlgefnlsikghaecvkfvksf 284 +lg ++++ k +++ k + + ENSCPOP00000004924.2 918 HtpPLGGYKVTAKCFGHLTKQLMTL 942 6337*********999987765554 PP
|
Protein Sequence (Fasta) | MHSMISSVDV KSEVPVGLEP ISPLDLRTDL RMMMPVVDPV VREKQLQQEL LLIQQQQQIQ 60 KQLLIAEFQK QHENLTRQHQ AQLQEHIKLQ QELLAIKQQQ ELLEKEQKLE QQRQEQEVER 120 HRREQQLPPL RGKDRGRERK RHRVSKPEAS KNSLLSKSAT KDTPTNGKNH SVSRHPKLWY 180 TAAHHTSLDQ SSPPLSGTSP SYKYTLPGTQ DAKDDFPLRK TASEPNLKVR SRLKQKVAER 240 RSSPLLRRKD GNVVTSFKKR MFEVTESSVS SSSPGSGPSS PNNGPTGNVT ENETSVLPPT 300 PHAEQLVSQQ RILIHEDSMN LLSLYTSPSL PNITLGLPAG SSQLNASNSL KEKQKCETQT 360 LRQGVPLPGQ YGGSIPTSSS HPHVTLEGKP NSSHQALLQH LLLKEQMRQQ KLLVAGGVPL 420 HPQSPLATKE RISPGIRGTH KLPRHRPLNR TQSAPLPQST LAQLVIQQQH QQFLEKQKQY 480 QQQIHMNKLL SKSIEQLKQP GRHLEEAEEE LQGDQAMQED RAPSSDNSTR SDSSACVDDT 540 LGQVGAVKVK EEPVDSDEDA QVQEMESGEQ AAFMQQVIGK DLAPGFVIKS PEPSAGSADP 600 EKPRLLSRTR SSPAAAILPR PTDRPRQPCS ATGIAYDPLM LKHQCICGNS TTHPEHAGRI 660 QSIWSRLQET GLLNKCERIQ GRKASLEEIQ LVHSEHHSLL YGTSPLDGQK LDPRILLGDD 720 SQKFFSSLPC GGLGVDSDTI WNELHSSGAA RMAVGCVIEL ASKVASGELK NGFAVVRPPG 780 HHAEESAAMG FCFFNSVAIT AKYLRDQLNI SKILIVDLDV HHGNGTQQAF YADPSILYIS 840 LHRYDEGNFF PGSGAPNEVG TGLGEGYNIN IAWTGGLDPP MGDVEYLEAF RTVVMPVAKE 900 FDPNMVLVSA GFDALEGHTP PLGGYKVTAK CFGHLTKQLM TLVDGRVVLA LEGGHDLTAI 960 CDASEACVNA LLGNE 975Protein Fasta Sequence
>ENSCPOP00000004924.2|Class-I|Cavia porcellus MHSMISSVDVKSEVPVGLEPISPLDLRTDLRMMMPVVDPVVREKQLQQELLLIQQQQQIQKQLLIAEFQKQHENLTRQHQAQLQEHIKLQQELLAIKQQQELLEKEQKLEQQRQEQEVERHRREQQLPPLRGKDRGRERKRHRVSKPEASKNSLLSKSATKDTPTNGKNHSVSRHPKLWYTAAHHTSLDQSSPPLSGTSPSYKYTLPGTQDAKDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLLRRKDGNVVTSFKKRMFEVTESSVSSSSPGSGPSSPNNGPTGNVTENETSVLPPTPHAEQLVSQQRILIHEDSMNLLSLYTSPSLPNITLGLPAGSSQLNASNSLKEKQKCETQTLRQGVPLPGQYGGSIPTSSSHPHVTLEGKPNSSHQALLQHLLLKEQMRQQKLLVAGGVPLHPQSPLATKERISPGIRGTHKLPRHRPLNRTQSAPLPQSTLAQLVIQQQHQQFLEKQKQYQQQIHMNKLLSKSIEQLKQPGRHLEEAEEELQGDQAMQEDRAPSSDNSTRSDSSACVDDTLGQVGAVKVKEEPVDSDEDAQVQEMESGEQAAFMQQVIGKDLAPGFVIKSPEPSAGSADPEKPRLLSRTRSSPAAAILPRPTDRPRQPCSATGIAYDPLMLKHQCICGNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQLVHSEHHSLLYGTSPLDGQKLDPRILLGDDSQKFFSSLPCGGLGVDSDTIWNELHSSGAARMAVGCVIELASKVASGELKNGFAVVRPPGHHAEESAAMGFCFFNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGSGAPNEVGTGLGEGYNINIAWTGGLDPPMGDVEYLEAFRTVVMPVAKEFDPNMVLVSAGFDALEGHTPPLGGYKVTAKCFGHLTKQLMTLVDGRVVLALEGGHDLTAICDASEACVNALLGNE
|
Nucleotide Sequence (Fasta) | ATGCACAGTA TGATCAGCTC AGTGGATGTG AAGTCAGAGG TTCCTGTGGG CCTGGAGCCC 60 ATCTCACCCC TAGACTTAAG GACAGACCTC AGGATGATGA TGCCAGTAGT GGACCCTGTC 120 GTCCGTGAGA AGCAGCTGCA GCAAGAGTTA CTTCTTATCC AGCAGCAGCA ACAAATCCAG 180 AAGCAGCTCC TGATAGCAGA GTTTCAGAAA CAGCACGAGA ACTTGACACG GCAGCACCAG 240 GCTCAGCTTC AGGAGCACAT CAAGTTGCAA CAGGAACTTC TAGCCATAAA ACAGCAACAA 300 GAACTCCTAG AAAAGGAGCA GAAGCTGGAG CAGCAGAGGC AAGAACAGGA AGTGGAGAGG 360 CATCGTAGAG AACAGCAGCT CCCTCCTCTC AGAGGCAAAG ACAGAGGACG AGAACGTAAG 420 AGGCACCGGG TAAGTAAGCC AGAAGCCTCC AAGAATTCCT TATTGAGTAA ATCAGCAACA 480 AAAGACACTC CAACTAATGG AAAAAATCAT TCCGTGAGCC GGCATCCCAA GCTCTGGTAC 540 ACGGCTGCCC ACCACACATC ATTGGATCAA AGCTCTCCAC CCCTTAGTGG AACATCTCCA 600 TCCTACAAAT ATACATTACC AGGAACCCAA GATGCCAAGG ATGATTTCCC TCTTCGAAAA 660 ACTGCCTCTG AGCCCAACTT GAAGGTGCGG TCCAGGTTAA AACAGAAAGT GGCAGAGAGG 720 AGAAGCAGCC CCTTACTCAG GCGGAAGGAT GGAAATGTTG TCACTTCATT CAAGAAGCGA 780 ATGTTTGAGG TGACAGAATC CTCAGTCAGC AGCAGTTCTC CAGGGTCTGG TCCCAGTTCA 840 CCAAACAATG GACCGACTGG AAATGTTACT GAAAATGAGA CTTCGGTTTT GCCCCCTACT 900 CCTCATGCTG AGCAACTGGT TTCACAGCAA CGCATTCTAA TTCATGAAGA TTCCATGAAC 960 CTGCTAAGTC TTTATACCTC TCCTTCTTTA CCCAACATTA CTTTGGGACT CCCAGCAGGG 1020 TCATCCCAGC TCAATGCTTC AAATTCTCTC AAAGAAAAGC AGAAGTGTGA GACACAGACA 1080 CTCAGGCAAG GTGTTCCCCT GCCTGGGCAG TACGGGGGCA GCATCCCAAC GTCTTCAAGC 1140 CATCCTCATG TGACTTTAGA GGGAAAGCCC AACAGCAGCC ACCAAGCTCT CCTGCAGCAT 1200 TTATTACTGA AAGAACAAAT GCGACAACAA AAGCTTCTTG TGGCCGGTGG AGTTCCTTTA 1260 CACCCGCAGT CTCCCTTGGC AACAAAAGAG AGAATTTCGC CGGGGATTAG AGGTACCCAC 1320 AAGTTGCCCC GTCACAGACC CCTGAATCGA ACCCAGTCTG CACCTTTGCC TCAAAGCACT 1380 TTGGCTCAGT TGGTCATTCA ACAGCAACAC CAGCAGTTCT TGGAGAAGCA GAAACAATAC 1440 CAGCAGCAGA TTCACATGAA CAAACTGCTT TCGAAATCTA TTGAACAACT GAAGCAACCG 1500 GGCAGGCACC TTGAGGAAGC AGAGGAAGAA CTTCAGGGGG ACCAGGCGAT GCAGGAAGAC 1560 AGAGCGCCCT CTAGTGACAA CAGCACTAGG AGCGACAGCA GTGCTTGTGT GGATGACACT 1620 CTGGGACAAG TTGGGGCTGT GAAGGTCAAG GAAGAACCAG TGGACAGTGA TGAAGATGCT 1680 CAGGTCCAGG AAATGGAATC TGGGGAGCAG GCTGCTTTTA TGCAACAGGT AATAGGCAAA 1740 GATTTAGCTC CAGGATTTGT AATTAAATCC CCGGAGCCCT CGGCGGGCTC GGCCGACCCG 1800 GAGAAGCCCC GGCTGCTCTC GCGGACGCGC TCCTCCCCTG CGGCCGCCAT CTTGCCCCGG 1860 CCCACGGACC GCCCCCGCCA GCCCTGCTCG GCAACCGGAA TTGCCTATGA CCCACTAATG 1920 CTGAAACACC AGTGCATCTG TGGCAATTCT ACCACCCACC CCGAGCATGC TGGACGAATA 1980 CAGAGCATCT GGTCACGGCT GCAAGAAACT GGGCTGCTAA ATAAATGTGA GCGAATTCAA 2040 GGTCGAAAAG CCAGCCTAGA GGAAATACAG CTTGTTCATT CTGAACATCA CTCACTGTTG 2100 TATGGCACCA GTCCCCTGGA TGGACAGAAG TTGGACCCCA GGATCCTCCT AGGTGATGAC 2160 TCTCAAAAGT TCTTTTCCTC ATTACCTTGT GGTGGACTTG GGGTGGACAG TGACACCATT 2220 TGGAATGAGC TGCACTCGTC CGGTGCTGCA CGCATGGCTG TTGGCTGTGT CATCGAGCTG 2280 GCTTCCAAAG TGGCCTCAGG AGAGCTGAAG AATGGATTCG CTGTTGTGAG GCCTCCAGGT 2340 CATCACGCTG AAGAATCCGC AGCCATGGGG TTCTGCTTTT TTAATTCAGT TGCAATTACC 2400 GCCAAATACT TGCGAGACCA ACTAAATATA AGCAAGATAT TGATTGTAGA TCTGGATGTT 2460 CACCATGGAA ACGGTACACA GCAGGCCTTT TATGCTGACC CCAGCATCCT GTATATTTCA 2520 CTCCATCGCT ATGATGAAGG GAACTTTTTC CCTGGCAGTG GAGCCCCAAA TGAGGTTGGC 2580 ACAGGCCTTG GAGAAGGATA TAATATAAAT ATTGCCTGGA CGGGTGGCCT TGATCCCCCT 2640 ATGGGAGATG TTGAGTACCT CGAAGCTTTC AGGACTGTTG TGATGCCTGT GGCCAAAGAG 2700 TTTGATCCAA ACATGGTCCT GGTTTCCGCT GGGTTTGATG CATTAGAAGG CCACACCCCT 2760 CCTCTAGGGG GGTACAAAGT GACAGCCAAA TGCTTTGGTC ATTTGACGAA GCAACTGATG 2820 ACACTGGTTG ATGGACGTGT GGTGTTAGCT TTAGAAGGAG GACATGATCT CACAGCGATT 2880 TGTGATGCCT CAGAAGCCTG TGTCAATGCC CTTCTAGGAA ATGAG
2926Nucleotide Fasta Sequence
>ENSCPOP00000004924.2|Class-I|Cavia porcellus ATGCACAGTATGATCAGCTCAGTGGATGTGAAGTCAGAGGTTCCTGTGGGCCTGGAGCCCATCTCACCCCTAGACTTAAGGACAGACCTCAGGATGATGATGCCAGTAGTGGACCCTGTCGTCCGTGAGAAGCAGCTGCAGCAAGAGTTACTTCTTATCCAGCAGCAGCAACAAATCCAGAAGCAGCTCCTGATAGCAGAGTTTCAGAAACAGCACGAGAACTTGACACGGCAGCACCAGGCTCAGCTTCAGGAGCACATCAAGTTGCAACAGGAACTTCTAGCCATAAAACAGCAACAAGAACTCCTAGAAAAGGAGCAGAAGCTGGAGCAGCAGAGGCAAGAACAGGAAGTGGAGAGGCATCGTAGAGAACAGCAGCTCCCTCCTCTCAGAGGCAAAGACAGAGGACGAGAACGTAAGAGGCACCGGGTAAGTAAGCCAGAAGCCTCCAAGAATTCCTTATTGAGTAAATCAGCAACAAAAGACACTCCAACTAATGGAAAAAATCATTCCGTGAGCCGGCATCCCAAGCTCTGGTACACGGCTGCCCACCACACATCATTGGATCAAAGCTCTCCACCCCTTAGTGGAACATCTCCATCCTACAAATATACATTACCAGGAACCCAAGATGCCAAGGATGATTTCCCTCTTCGAAAAACTGCCTCTGAGCCCAACTTGAAGGTGCGGTCCAGGTTAAAACAGAAAGTGGCAGAGAGGAGAAGCAGCCCCTTACTCAGGCGGAAGGATGGAAATGTTGTCACTTCATTCAAGAAGCGAATGTTTGAGGTGACAGAATCCTCAGTCAGCAGCAGTTCTCCAGGGTCTGGTCCCAGTTCACCAAACAATGGACCGACTGGAAATGTTACTGAAAATGAGACTTCGGTTTTGCCCCCTACTCCTCATGCTGAGCAACTGGTTTCACAGCAACGCATTCTAATTCATGAAGATTCCATGAACCTGCTAAGTCTTTATACCTCTCCTTCTTTACCCAACATTACTTTGGGACTCCCAGCAGGGTCATCCCAGCTCAATGCTTCAAATTCTCTCAAAGAAAAGCAGAAGTGTGAGACACAGACACTCAGGCAAGGTGTTCCCCTGCCTGGGCAGTACGGGGGCAGCATCCCAACGTCTTCAAGCCATCCTCATGTGACTTTAGAGGGAAAGCCCAACAGCAGCCACCAAGCTCTCCTGCAGCATTTATTACTGAAAGAACAAATGCGACAACAAAAGCTTCTTGTGGCCGGTGGAGTTCCTTTACACCCGCAGTCTCCCTTGGCAACAAAAGAGAGAATTTCGCCGGGGATTAGAGGTACCCACAAGTTGCCCCGTCACAGACCCCTGAATCGAACCCAGTCTGCACCTTTGCCTCAAAGCACTTTGGCTCAGTTGGTCATTCAACAGCAACACCAGCAGTTCTTGGAGAAGCAGAAACAATACCAGCAGCAGATTCACATGAACAAACTGCTTTCGAAATCTATTGAACAACTGAAGCAACCGGGCAGGCACCTTGAGGAAGCAGAGGAAGAACTTCAGGGGGACCAGGCGATGCAGGAAGACAGAGCGCCCTCTAGTGACAACAGCACTAGGAGCGACAGCAGTGCTTGTGTGGATGACACTCTGGGACAAGTTGGGGCTGTGAAGGTCAAGGAAGAACCAGTGGACAGTGATGAAGATGCTCAGGTCCAGGAAATGGAATCTGGGGAGCAGGCTGCTTTTATGCAACAGGTAATAGGCAAAGATTTAGCTCCAGGATTTGTAATTAAATCCCCGGAGCCCTCGGCGGGCTCGGCCGACCCGGAGAAGCCCCGGCTGCTCTCGCGGACGCGCTCCTCCCCTGCGGCCGCCATCTTGCCCCGGCCCACGGACCGCCCCCGCCAGCCCTGCTCGGCAACCGGAATTGCCTATGACCCACTAATGCTGAAACACCAGTGCATCTGTGGCAATTCTACCACCCACCCCGAGCATGCTGGACGAATACAGAGCATCTGGTCACGGCTGCAAGAAACTGGGCTGCTAAATAAATGTGAGCGAATTCAAGGTCGAAAAGCCAGCCTAGAGGAAATACAGCTTGTTCATTCTGAACATCACTCACTGTTGTATGGCACCAGTCCCCTGGATGGACAGAAGTTGGACCCCAGGATCCTCCTAGGTGATGACTCTCAAAAGTTCTTTTCCTCATTACCTTGTGGTGGACTTGGGGTGGACAGTGACACCATTTGGAATGAGCTGCACTCGTCCGGTGCTGCACGCATGGCTGTTGGCTGTGTCATCGAGCTGGCTTCCAAAGTGGCCTCAGGAGAGCTGAAGAATGGATTCGCTGTTGTGAGGCCTCCAGGTCATCACGCTGAAGAATCCGCAGCCATGGGGTTCTGCTTTTTTAATTCAGTTGCAATTACCGCCAAATACTTGCGAGACCAACTAAATATAAGCAAGATATTGATTGTAGATCTGGATGTTCACCATGGAAACGGTACACAGCAGGCCTTTTATGCTGACCCCAGCATCCTGTATATTTCACTCCATCGCTATGATGAAGGGAACTTTTTCCCTGGCAGTGGAGCCCCAAATGAGGTTGGCACAGGCCTTGGAGAAGGATATAATATAAATATTGCCTGGACGGGTGGCCTTGATCCCCCTATGGGAGATGTTGAGTACCTCGAAGCTTTCAGGACTGTTGTGATGCCTGTGGCCAAAGAGTTTGATCCAAACATGGTCCTGGTTTCCGCTGGGTTTGATGCATTAGAAGGCCACACCCCTCCTCTAGGGGGGTACAAAGTGACAGCCAAATGCTTTGGTCATTTGACGAAGCAACTGATGACACTGGTTGATGGACGTGTGGTGTTAGCTTTAGAAGGAGGACATGATCTCACAGCGATTTGTGATGCCTCAGAAGCCTGTGTCAATGCCCTTCTAGGAAATGAG
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |