| Tag |
Content |
| WERAM ID |
WERAM-Caf-0116 |
| Ensembl Protein ID |
ENSCAFP00000015619.3 |
| Gene Name |
HDAC1 |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
8.10e-175 |
581.1 |
9 |
321 |
|
| Organism |
Canis familiaris |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvg 89
+kv+y+yd dvg+y+ygq+hpmkp+r+++th+L+lnygl++k+ei++p+ka+aee++k+hs++yi+fl++++p+n++e+sk++++fnvg
ENSCAFP00000015619.3 9 RKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVG 97
589************************************************************************************** PP
class-1.txt 90 edcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveea 178
edcPvfdglfe+cql+tG+s+++a kLnk+++dia+nwaGGlhhakkseasGfcyvnDivlailellk+h+rvlyidid+hhGDgveea
ENSCAFP00000015619.3 98 EDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186
***************************************************************************************** PP
class-1.txt 179 fyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgef 267
fyttdrvmtvsfhkyge +fPgtGdl+d+ga+kgkyyavn+Pl+dgidDesye+ifk+v+skv+e+f+P+avvlqcG+Dsl+gDrlg+f
ENSCAFP00000015619.3 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCF 274
*****************.*********************************************************************** PP
class-1.txt 268 nlsik.ghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
nl+ik gha+cv+fvksfnlp+l+lGGGGYt+rnvaRcwtyetav+l
ENSCAFP00000015619.3 275 NLTIKeGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVAL 321
***9669*************************************987 PP
|
Protein Sequence
(Fasta) | MAQTQGTRRK VCYYYDGDVG NYYYGQGHPM KPHRIRMTHN LLLNYGLYRK MEIYRPHKAN 60
AEEMTKYHSD DYIKFLRSIR PDNMSEYSKQ MQRFNVGEDC PVFDGLFEFC QLSTGGSVAS 120
AVKLNKQQTD IAVNWAGGLH HAKKSEASGF CYVNDIVLAI LELLKYHQRV LYIDIDIHHG 180
DGVEEAFYTT DRVMTVSFHK YGEYFPGTGD LRDIGAGKGK YYAVNYPLRD GIDDESYEAI 240
FKPVMSKVME MFQPSAVVLQ CGSDSLSGDR LGCFNLTIKE GHAKCVEFVK SFNLPMLMLG 300
GGGYTIRNVA RCWTYETAVA LDTEIPNELP YNDYFEYFGP DFKLHISPSN MTNQNTNEYL 360
EKIKQRLFEN LRMLPHAPGV QMQVIPEDAI PEESGDEDEE DPDKRISICS SDKRIACEEE 420
FSDSDEEGEG GRKNSSNFKK AKRVKTEDEK EKDPEEKKEV TEEEKTKEEK QEAKGVKEEV 480
KLA 483Protein Fasta Sequence
>ENSCAFP00000015619.3|Class-I|Canis familiaris
MAQTQGTRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKEGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQVIPEDAIPEESGDEDEEDPDKRISICSSDKRIACEEEFSDSDEEGEGGRKNSSNFKKAKRVKTEDEKEKDPEEKKEVTEEEKTKEEKQEAKGVKEEVKLA |
Nucleotide Sequence
(Fasta) | ATGGCGCAGA CTCAGGGCAC CAGGAGGAAA GTCTGTTACT ACTACGACGG GGATGTTGGA 60
AATTACTATT ATGGACAAGG CCACCCAATG AAGCCTCACC GAATCCGTAT GACTCACAAT 120
TTGCTACTTA ACTATGGTCT CTACCGAAAA ATGGAAATCT ATCGCCCTCA CAAAGCCAAT 180
GCCGAGGAGA TGACCAAGTA CCACAGTGAT GACTACATTA AATTCTTGCG CTCCATCCGC 240
CCAGATAACA TGTCCGAGTA CAGTAAGCAG ATGCAGAGAT TCAACGTCGG TGAGGACTGT 300
CCAGTATTTG ATGGCCTGTT TGAATTCTGT CAGTTATCTA CTGGTGGCTC TGTGGCGAGT 360
GCTGTGAAAT TGAATAAGCA GCAGACAGAC ATCGCTGTGA ATTGGGCCGG GGGGCTGCAC 420
CATGCAAAGA AGTCTGAGGC ATCTGGCTTC TGTTACGTCA ATGATATCGT CTTGGCCATC 480
CTGGAACTGC TAAAGTATCA CCAGAGGGTG CTGTATATTG ACATTGATAT TCACCACGGC 540
GATGGCGTGG AAGAGGCCTT CTATACCACA GACCGGGTCA TGACTGTGTC CTTTCATAAA 600
TACGGAGAGT ACTTCCCAGG AACTGGGGAC CTACGGGATA TTGGGGCTGG CAAAGGCAAG 660
TATTATGCTG TTAACTACCC GCTCCGAGAT GGGATCGATG ACGAGTCCTA TGAGGCCATT 720
TTCAAGCCGG TCATGTCCAA AGTGATGGAG ATGTTCCAGC CCAGTGCGGT GGTCTTACAG 780
TGTGGCTCTG ACTCCCTGTC TGGGGATCGG TTAGGTTGCT TCAATCTCAC GATCAAAGAA 840
GGGCACGCCA AGTGTGTGGA GTTTGTGAAG AGCTTCAACC TGCCTATGCT GATGCTGGGA 900
GGAGGCGGCT ACACCATCCG TAATGTGGCC CGCTGCTGGA CATATGAAAC AGCTGTGGCC 960
CTGGACACGG AAATCCCGAA TGAGCTTCCG TACAATGACT ACTTTGAATA CTTTGGACCA 1020
GATTTCAAAC TTCACATCAG TCCTTCCAAT ATGACCAACC AGAATACCAA TGAATACCTG 1080
GAGAAGATCA AACAGCGACT GTTTGAGAAC CTGAGAATGC TGCCCCACGC ACCTGGGGTC 1140
CAAATGCAGG TGATTCCTGA GGATGCCATT CCAGAGGAGA GTGGCGACGA GGACGAAGAA 1200
GACCCTGACA AGCGCATCTC TATCTGTTCA TCTGACAAAC GAATTGCCTG TGAGGAAGAG 1260
TTCTCGGACT CTGATGAGGA GGGAGAAGGT GGTCGTAAGA ACTCTTCCAA CTTCAAAAAA 1320
GCCAAGAGAG TCAAAACTGA GGACGAAAAA GAGAAAGACC CAGAAGAGAA GAAAGAAGTC 1380
ACAGAAGAGG AGAAAACCAA GGAGGAGAAG CAAGAAGCCA AAGGGGTCAA GGAGGAGGTC 1440
AAGTTGGCCT GA
1453Nucleotide Fasta Sequence
>ENSCAFP00000015619.3|Class-I|Canis familiaris
ATGGCGCAGACTCAGGGCACCAGGAGGAAAGTCTGTTACTACTACGACGGGGATGTTGGAAATTACTATTATGGACAAGGCCACCCAATGAAGCCTCACCGAATCCGTATGACTCACAATTTGCTACTTAACTATGGTCTCTACCGAAAAATGGAAATCTATCGCCCTCACAAAGCCAATGCCGAGGAGATGACCAAGTACCACAGTGATGACTACATTAAATTCTTGCGCTCCATCCGCCCAGATAACATGTCCGAGTACAGTAAGCAGATGCAGAGATTCAACGTCGGTGAGGACTGTCCAGTATTTGATGGCCTGTTTGAATTCTGTCAGTTATCTACTGGTGGCTCTGTGGCGAGTGCTGTGAAATTGAATAAGCAGCAGACAGACATCGCTGTGAATTGGGCCGGGGGGCTGCACCATGCAAAGAAGTCTGAGGCATCTGGCTTCTGTTACGTCAATGATATCGTCTTGGCCATCCTGGAACTGCTAAAGTATCACCAGAGGGTGCTGTATATTGACATTGATATTCACCACGGCGATGGCGTGGAAGAGGCCTTCTATACCACAGACCGGGTCATGACTGTGTCCTTTCATAAATACGGAGAGTACTTCCCAGGAACTGGGGACCTACGGGATATTGGGGCTGGCAAAGGCAAGTATTATGCTGTTAACTACCCGCTCCGAGATGGGATCGATGACGAGTCCTATGAGGCCATTTTCAAGCCGGTCATGTCCAAAGTGATGGAGATGTTCCAGCCCAGTGCGGTGGTCTTACAGTGTGGCTCTGACTCCCTGTCTGGGGATCGGTTAGGTTGCTTCAATCTCACGATCAAAGAAGGGCACGCCAAGTGTGTGGAGTTTGTGAAGAGCTTCAACCTGCCTATGCTGATGCTGGGAGGAGGCGGCTACACCATCCGTAATGTGGCCCGCTGCTGGACATATGAAACAGCTGTGGCCCTGGACACGGAAATCCCGAATGAGCTTCCGTACAATGACTACTTTGAATACTTTGGACCAGATTTCAAACTTCACATCAGTCCTTCCAATATGACCAACCAGAATACCAATGAATACCTGGAGAAGATCAAACAGCGACTGTTTGAGAACCTGAGAATGCTGCCCCACGCACCTGGGGTCCAAATGCAGGTGATTCCTGAGGATGCCATTCCAGAGGAGAGTGGCGACGAGGACGAAGAAGACCCTGACAAGCGCATCTCTATCTGTTCATCTGACAAACGAATTGCCTGTGAGGAAGAGTTCTCGGACTCTGATGAGGAGGGAGAAGGTGGTCGTAAGAACTCTTCCAACTTCAAAAAAGCCAAGAGAGTCAAAACTGAGGACGAAAAAGAGAAAGACCCAGAAGAGAAGAAAGAAGTCACAGAAGAGGAGAAAACCAAGGAGGAGAAGCAAGAAGCCAAAGGGGTCAAGGAGGAGGTCAAGTTGGCCTGA
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
