WERAM Information

Tag Content
WERAM ID WERAM-Bot-0118
Ensembl Protein ID ENSBTAP00000016877.5
Gene Name HDAC1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSBTAG00000012698.5 ENSBTAT00000016877.5 ENSBTAP00000016877.5
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 1.20e-176 586.9 9 320
Organism Bos taurus
Domain Profile
  HDAC Class-I
           class-1.txt   1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvg 89 
                           +kv+y+yd dvg+y+ygq+hpmkp+r+++th+L+lnygl++k+ei++p+ka+aee++k+hs++yi+fl++++p+n++e+sk++++fnvg
  ENSBTAP00000016877.5   9 RKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVG 97 
                           589************************************************************************************** PP
           class-1.txt  90 edcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveea 178
                           edcPvfdglfe+cql+tG+s+++a kLnk+++dia+nwaGGlhhakkseasGfcyvnDivlailellk+h+rvlyidid+hhGDgveea
  ENSBTAP00000016877.5  98 EDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186
                           ***************************************************************************************** PP
           class-1.txt 179 fyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgef 267
                           fyttdrvmtvsfhkyge +fPgtGdl+d+ga+kgkyyavn+Pl+dgidDesye+ifk+v+skv+e+f+P+avvlqcG+Dsl+gDrlg+f
  ENSBTAP00000016877.5 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCF 274
                           *****************.*********************************************************************** PP
           class-1.txt 268 nlsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
                           nl+ikgha+cv+fvksfnlp+l+lGGGGYt+rnvaRcwtyetav+l
  ENSBTAP00000016877.5 275 NLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVAL 320
                           *******************************************987 PP
Protein Sequence
(Fasta)		MAQTQGTKRK VCYYYDGDVG NYYYGQGHPM KPHRIRMTHN LLLNYGLYRK MEIYRPHKAN 60
AEEMTKYHSD DYIKFLRSIR PDNMSEYSKQ MQRFNVGEDC PVFDGLFEFC QLSTGGSVAS 120
AVKLNKQQTD IAVNWAGGLH HAKKSEASGF CYVNDIVLAI LELLKYHQRV LYIDIDIHHG 180
DGVEEAFYTT DRVMTVSFHK YGEYFPGTGD LRDIGAGKGK YYAVNYPLRD GIDDESYEAI 240
FKPVMSKVME MFQPSAVVLQ CGSDSLSGDR LGCFNLTIKG HAKCVEFVKS FNLPMLMLGG 300
GGYTIRNVAR CWTYETAVAL DTEIPNELPY NDYFEYFGPD FKLHISPSNM TNQNTNEYLE 360
KIKQRLFENL RMLPHAPGVQ MQAIPEDAIP EESGDEDEED PDKRISICSS DKRIACEEEF 420
SDSDEEGEGG RKNSSNFKKA KRVKTEDEKE KDPEEKKEVT EEEKTKEEKQ EAKGVKEEVK 480
LA 482
Nucleotide Sequence
(Fasta)		GGACCGATTG ACGGGAGGGA CGGGAGGCGA GCAAGATGGC GCAGACTCAG GGCACCAAGA 60
GGAAAGTCTG TTACTATTAC GACGGGGATG TTGGAAATTA CTATTATGGA CAAGGCCACC 120
CAATGAAGCC TCACCGAATC CGCATGACTC ATAATTTACT CCTTAACTAT GGTCTCTACC 180
GGAAGATGGA AATCTATCGC CCTCACAAAG CCAATGCTGA GGAGATGACC AAGTACCACA 240
GTGATGACTA CATTAAATTC TTACGCTCCA TCCGCCCAGA TAACATGTCC GAGTACAGCA 300
AGCAGATGCA GAGATTCAAC GTCGGTGAGG ACTGTCCCGT ATTTGATGGC CTGTTTGAGT 360
TCTGTCAGCT GTCTACTGGT GGCTCTGTGG CAAGTGCTGT GAAACTTAAT AAGCAGCAGA 420
CGGACATCGC TGTGAATTGG GCTGGGGGCC TACACCATGC AAAGAAGTCC GAGGCATCTG 480
GCTTCTGTTA CGTCAATGAT ATCGTCTTGG CCATCCTGGA ACTGCTAAAG TATCACCAGA 540
GGGTGCTGTA TATTGACATT GATATTCACC ACGGCGATGG CGTGGAAGAG GCCTTCTATA 600
CCACAGACCG AGTCATGACT GTGTCCTTTC ATAAATATGG AGAGTACTTC CCAGGAACTG 660
GGGACCTACG GGATATTGGA GCTGGCAAAG GCAAGTATTA TGCTGTTAAC TACCCTCTCC 720
GAGATGGGAT TGACGACGAG TCCTATGAGG CCATTTTCAA GCCGGTCATG TCCAAAGTAA 780
TGGAGATGTT CCAGCCCAGT GCAGTTGTCT TGCAGTGTGG CTCTGACTCC TTGTCTGGGG 840
ATCGGTTAGG TTGCTTCAAT CTGACCATCA AAGGGCATGC CAAGTGTGTG GAATTTGTGA 900
AGAGCTTCAA CCTGCCTATG CTGATGCTGG GAGGAGGTGG CTACACCATT CGTAATGTCG 960
CCCGGTGCTG GACATATGAA ACAGCTGTGG CCCTGGACAC GGAGATCCCT AATGAGCTTC 1020
CATACAACGA CTACTTCGAA TACTTTGGAC CAGATTTCAA ACTTCATATC AGTCCTTCCA 1080
ATATGACTAA CCAGAACACT AATGAGTACC TGGAAAAGAT CAAACAGCGG CTGTTCGAGA 1140
ACCTAAGAAT GCTGCCCCAC GCGCCTGGGG TCCAGATGCA GGCCATCCCC GAGGACGCCA 1200
TTCCAGAGGA GAGTGGTGAT GAGGATGAAG AAGACCCTGA CAAGCGCATC TCAATCTGTT 1260
CCTCGGACAA ACGAATTGCC TGTGAGGAAG AGTTCTCCGA CTCTGACGAG GAGGGAGAAG 1320
GCGGGCGCAA GAACTCTTCC AACTTCAAGA AAGCCAAGAG AGTCAAAACA GAGGATGAGA 1380
AAGAGAAAGA TCCAGAAGAG AAGAAAGAAG TCACAGAAGA GGAGAAAACC AAGGAAGAGA 1440
AGCAAGAAGC CAAAGGGGTC AAGGAAGAGG TCAAGTTGGC CTGAAGAGAC CTCTCCAGTT 1500
CTGGCTTCTT GCCAAATCCC TACCTTTATC CCACAACCCT TCAGATTTTA TATTTTCTAT 1560
TTCTCTGTGT ATTTATATAA AAATATATTA AATATAAATA TCCCCAGGGA CTAGACAGGA 1620
ACCAGGGCCC TGAGGTCAGG GCACACATTA CTTTTCTAGT AGCTGCCTTG CAACCCGTCC 1680
CTCCCAAACT CTTGAACCCT AATGGGTACT GGGTAAAAGG GATCCACTTA AGCAGCCATA 1740
GGACAAAATC TTGAAGTGCC TGCTTCATAG CTTTGAAAAG GTGCCCTTGC TGAGCATTTG 1800
AGAAGGGGTG GCTGGGTCTT CAGGGACTCC CTGTTGTGTT TAGGCTCTTA AGGTAACATC 1860
AGCCATTTTT AGATTGGTTC TGTTCTCATG CCTGCCCTCT CTCTGTCTTT CCCCCAGTTC 1920
TGCAGGTGAA GATTGGTAGT CTAGTTTCCA TTTTGAGATA CTATATTTCA TTTTTGTGAG 1980
AATCTTTGTA ATAAAATGGT ACATTTC 2008
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Mum-0093 ENSMUSP00000099657.4 Mus musculus 100 0.0 834
WERAM-Ova-0221 ENSOARP00000022517.1 Ovis aries 100 0.0 834
WERAM-Hos-0092 ENSP00000362649.3 Homo sapiens 99 0.0 833
WERAM-Gog-0132 ENSGGOP00000011454.2 Gorilla gorilla 99 0.0 833
WERAM-Ran-0062 ENSRNOP00000012854.5 Rattus norvegicus 100 0.0 833
WERAM-Otg-0072 ENSOGAP00000005101.2 Otolemur garnettii 100 0.0 833
WERAM-Orc-0030 ENSOCUP00000003186.2 Oryctolagus cuniculus 99 0.0 832
WERAM-Nol-0026 ENSNLEP00000003167.1 Nomascus leucogenys 99 0.0 832
WERAM-Ptv-0152 ENSPVAP00000012567.1 Pteropus vampyrus 99 0.0 831
WERAM-Cap-0092 ENSCPOP00000006985.2 Cavia porcellus 99 0.0 830
WERAM-Mup-0173 ENSMPUP00000015122.1 Mustela putorius furo 99 0.0 829
WERAM-Ocp-0006 ENSOPRP00000000780.1 Ochotona princeps 100 0.0 828
WERAM-Poa-0013 ENSPPYP00000001838.2 Pongo abelii 99 0.0 827
WERAM-Caf-0116 ENSCAFP00000015619.3 Canis familiaris 99 0.0 826
WERAM-Loa-0056 ENSLAFP00000004079.2 Loxodonta africana 98 0.0 822
WERAM-Myl-0152 ENSMLUP00000012593.2 Myotis lucifugus 99 0.0 820
WERAM-Dan-0175 ENSDNOP00000033349.1 Dasypus novemcinctus 99 0.0 820
WERAM-Aim-0087 ENSAMEP00000008076.1 Ailuropoda melanoleuca 99 0.0 818
WERAM-Chs-0011 ENSCSAP00000016960.1 Chlorocebus sabaeus 100 0.0 818
WERAM-Pat-0210 ENSPTRP00000060659.1 Pan troglodytes 100 0.0 816
WERAM-Eqc-0125 ENSECAP00000014039.1 Equus caballus 99 0.0 812
WERAM-Fec-0127 ENSFCAP00000011581.3 Felis catus 100 0.0 810
WERAM-Sus-0201 ENSSSCP00000023024.1 Sus scrofa 99 0.0 808
WERAM-Gaga-0034 ENSGALP00000005212.3 Gallus gallus 96 0.0 808
WERAM-Tag-0022 ENSTGUP00000001473.1 Taeniopygia guttata 95 0.0 805
WERAM-Anc-0033 ENSACAP00000004062.3 Anolis carolinensis 95 0.0 803
WERAM-Anp-0136 ENSAPLP00000014652.1 Anas platyrhynchos 96 0.0 792
WERAM-Meg-0047 ENSMGAP00000004521.2 Meleagris gallopavo 96 0.0 787
WERAM-Fia-0005 ENSFALP00000000658.1 Ficedula albicollis 95 0.0 786
WERAM-Pes-0020 ENSPSIP00000004435.1 Pelodiscus sinensis 92 0.0 783
WERAM-Mod-0160 ENSMODP00000021783.2 Monodelphis domestica 94 0.0 777
WERAM-Xet-0037 ENSXETP00000011480.3 Xenopus tropicalis 94 0.0 774
WERAM-Leo-0014 ENSLOCP00000002993.1 Lepisosteus oculatus 94 0.0 773
WERAM-Tar-0062 ENSTRUP00000012875.1 Takifugu rubripes 93 0.0 763
WERAM-Dar-0035 ENSDARP00000051798.4 Danio rerio 92 0.0 761
WERAM-Gam-0211 ENSGMOP00000020496.1 Gadus morhua 92 0.0 760
WERAM-Mam-0083 ENSMMUP00000013015.2 Macaca mulatta 100 0.0 759
WERAM-Orn-0090 ENSONIP00000010308.1 Oreochromis niloticus 93 0.0 758
WERAM-Gaa-0072 ENSGACP00000009568.1 Gasterosteus aculeatus 93 0.0 758
WERAM-Tut-0018 ENSTTRP00000001520.1 Tursiops truncatus 100 0.0 757
WERAM-Orla-0151 ENSORLP00000017757.1 Oryzias latipes 91 0.0 754
WERAM-Xim-0229 ENSXMAP00000019038.1 Xiphophorus maculatus 91 0.0 753
WERAM-Pof-0034 ENSPFOP00000002952.2 Poecilia formosa 91 0.0 753
WERAM-Asm-0120 ENSAMXP00000012237.1 Astyanax mexicanus 91 0.0 750
WERAM-Ten-0200 ENSTNIP00000020022.1 Tetraodon nigroviridis 93 0.0 747
WERAM-Paa-0030 ENSPANP00000015145.1 Papio anubis 90 0.0 741
WERAM-Ict-0111 ENSSTOP00000011457.2 Ictidomys tridecemlineatus 90 0.0 740
WERAM-Prc-0059 ENSPCAP00000005589.1 Procavia capensis 92 0.0 740
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 90 0.0 738
WERAM-Ere-0068 ENSEEUP00000005465.1 Erinaceus europaeus 91 0.0 736
WERAM-Sah-0134 ENSSHAP00000014467.1 Sarcophilus harrisii 91 0.0 736
WERAM-Caj-0052 ENSCJAP00000008409.2 Callithrix jacchus 91 0.0 731
WERAM-Ora-0034 ENSOANP00000005760.2 Ornithorhynchus anatinus 91 0.0 729
WERAM-Tas-0085 ENSTSYP00000008588.1 Tarsius syrichta 89 0.0 717
WERAM-Drm-0018 FBpp0073173 Drosophila melanogaster 82 0.0 709
WERAM-Cii-0014 ENSCINP00000005410.3 Ciona intestinalis 89 0.0 705
WERAM-Dio-0132 ENSDORP00000012520.1 Dipodomys ordii 84 0.0 669
WERAM-Mae-0030 ENSMEUP00000002192.1 Macropus eugenii 86 0.0 664
WERAM-Vip-0012 ENSVPAP00000001394.1 Vicugna pacos 81 0.0 658
WERAM-Mim-0092 ENSMICP00000008598.1 Microcebus murinus 87 0.0 657
WERAM-Tub-0143 ENSTBEP00000015305.1 Tupaia belangeri 90 0.0 636
WERAM-Pem-0096 ENSPMAP00000010023.1 Petromyzon marinus 81 0.0 632
WERAM-Cae-0005 C53A5.3 Caenorhabditis elegans 71 1e-166 583
WERAM-Soa-0003 ENSSARP00000000316.1 Sorex araneus 80 3e-165 578
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 69 8e-165 577
WERAM-Asc-0037 CADACLAP00008612 Aspergillus clavatus 69 2e-163 572
WERAM-Asfu-0015 CADAFUAP00003503 Aspergillus fumigatus 69 5e-163 571
WERAM-Asni-0020 CADANGAP00005938 Aspergillus niger 68 1e-162 570
WERAM-Brd-0020 BRADI1G37290.1 Brachypodium distachyon 70 1e-162 570
WERAM-Asn-0024 CADANIAP00005952 Aspergillus nidulans 68 1e-162 570
WERAM-Chh-0084 ENSCHOP00000009394.1 Choloepus hoffmanni 73 2e-162 569
WERAM-Tra-0318 Traes_7DL_578CF3F0D.2 Triticum aestivum 70 2e-162 569
WERAM-Coi-0024 EAS33504 Coccidioides immitis 68 4e-162 568
WERAM-Php-0088 PP1S351_29V6.1 Physcomitrella patens 68 5e-162 568
WERAM-Map-0015 MAPG_05105T0 Magnaporthe poae 69 9e-160 560
WERAM-Sem-0128 EFJ38890 Selaginella moellendorffii 68 1e-159 560
WERAM-Osl-0002 ABO94711 Ostreococcus lucimarinus 69 2e-159 560
WERAM-Gag-0026 GGTG_08607T0 Gaeumannomyces graminis 69 2e-159 559
WERAM-Scs-0023 EDO03342 Sclerotinia sclerotiorum 67 3e-159 558
WERAM-Ved-0020 EGY15146 Verticillium dahliae 67 8e-159 557
WERAM-Hov-0001 MLOC_10109.1 Hordeum vulgare 69 3e-158 555
WERAM-Amt-0072 ERN20455 Amborella trichopoda 67 6e-158 554
WERAM-Prp-0060 EMJ10303 Prunus persica 68 7e-158 554
WERAM-Viv-0108 VIT_17s0000g09070.t01 Vitis vinifera 68 8e-158 554
WERAM-Trv-0003 EHK19072 Trichoderma virens 68 1e-157 553
WERAM-Tum-0029 CAZ85499 Tuber melanosporum 68 2e-157 553
WERAM-Ori-0039 BGIOSGA012324-PA Oryza indica 69 2e-157 552
WERAM-Orb-0066 OBART06G19560.1 Oryza barthii 69 4e-157 551
WERAM-Ors-0059 OS06T0583400-01 Oryza sativa 69 4e-157 551
WERAM-Orr-0068 ORUFI06G20660.1 Oryza rufipogon 69 7e-157 551
WERAM-Mao-0017 MGG_05857T0 Magnaporthe oryzae 68 7e-157 551
WERAM-Orgl-0064 OGLUM06G20570.1 Oryza glumaepatula 69 8e-157 550
WERAM-Orp-0064 OPUNC06G17670.1 Oryza punctata 70 1e-156 550
WERAM-Orbr-0074 OB06G27130.1 Oryza brachyantha 69 1e-156 550
WERAM-Glm-0046 GLYMA05G02540.1 Glycine max 67 2e-156 549
WERAM-Trr-0017 EGR48353 Trichoderma reesei 68 4e-156 548
WERAM-Met-0084 KEH36404 Medicago truncatula 70 6e-156 548
WERAM-Thc-0029 EOY20838 Theobroma cacao 66 7e-156 547
WERAM-Caa-0018 KGT69072 Candida albicans 65 1e-155 547
WERAM-Sob-0135 Sb10g022820.1 Sorghum bicolor 70 1e-155 547
WERAM-Sei-0026 Si006243m Setaria italica 69 1e-155 546
WERAM-Zyt-0024 Mycgr3P51809 Zymoseptoria tritici 67 1e-155 546
WERAM-Brr-0180 Bra035858.1-P Brassica rapa 66 2e-155 546
WERAM-Zem-0056 GRMZM2G081474_P01 Zea mays 69 3e-155 546
WERAM-Orm-0063 OMERI06G19730.1 Oryza meridionalis 69 3e-155 545
WERAM-Bro-0169 Bo9g017510.1 Brassica oleracea 66 4e-155 545
WERAM-Kop-0004 CAY67954 Komagataella pastoris 66 6e-155 544
WERAM-Kll-0018 CAG99124 Kluyveromyces lactis 66 8e-155 544
WERAM-Orni-0065 ONIVA06G23170.1 Oryza nivara 69 8e-155 544
WERAM-Yal-0022 CAG79885 Yarrowia lipolytica 66 1e-154 543
WERAM-Pot-0131 POPTR_0012s08570.1 Populus trichocarpa 66 2e-154 543
WERAM-Sot-0088 PGSC0003DMT400076252 Solanum tuberosum 69 3e-154 542
WERAM-Cag-0003 CAG57932 Candida glabrata 66 4e-154 541
WERAM-Aet-0051 EMT16627 Aegilops tauschii 68 7e-154 541
WERAM-Sol-0120 Solyc09g091440.2.1 Solanum lycopersicum 68 7e-154 541
WERAM-Arl-0113 fgenesh2_kg.8__ 2309__ AT5G63110.1 Arabidopsis lyrata 66 7e-154 541
WERAM-Asg-0034 AAS54885 Ashbya gossypii 65 7e-154 541
WERAM-Art-0148 AT5G63110.1 Arabidopsis thaliana 66 8e-154 540
WERAM-Lep-0066 LPERR06G16070.1 Leersia perrieri 69 1e-153 540
WERAM-Chg-0005 EAQ93036 Chaetomium globosum 62 2e-153 539
WERAM-Ast-0010 CADATEAP00004306 Aspergillus terreus 66 2e-153 539
WERAM-Sac-0039 YNL330C Saccharomyces cerevisiae 65 1e-151 533
WERAM-Phn-0005 SNOT_00508 Phaeosphaeria nodorum 67 3e-151 532
WERAM-Pyt-0025 EFQ89270 Pyrenophora teres 64 1e-150 530
WERAM-Lem-0026 CBX91288 Leptosphaeria maculans 67 2e-150 529
WERAM-Scp-0033 SPBC36.05c.1:pep Schizosaccharomyces pombe 65 3e-150 528
WERAM-Lac-0087 ENSLACP00000011092.1 Latimeria chalumnae 64 5e-150 528
WERAM-Pytr-0033 EDU43668 Pyrenophora triticirepentis 66 7e-150 527
WERAM-Spr-0005 CBQ70764 Sporisorium reilianum 62 3e-149 525
Created Date 25-Jun-2016