| Tag |
Content |
| WERAM ID |
WERAM-Brd-0020 |
| Ensembl Protein ID |
BRADI1G37290.1 |
| Gene Name |
BRADI1G37290.1 |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
3.20e-164 |
546.6 |
22 |
332 |
|
| Organism |
Brachypodium distachyon |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvf 95
++v+y+yd++vg+y+ygq+hpmkp+r+++th L+ +ygl +++++kp+ a+ ++l++fh+++y++fl++v+pe++++ ++ lk+fnvgedcPvf
BRADI1G37290.1 22 RRVCYFYDSEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLDEMQVLKPHPARDRDLCRFHADDYVSFLRSVTPETQQDQIRALKRFNVGEDCPVF 116
589******************************************************************************************** PP
class-1.txt 96 dglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvmtvsf 190
dgl+++cq+++G+s+ +a kLn++ diainwaGGlhhakk+easGfcyvnDivlailellk+h+rvly+did+hhGDgveeafyttdrvmtvsf
BRADI1G37290.1 117 DGLYSFCQTYAGGSVGGAVKLNHG-HDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKYHQRVLYVDIDIHHGDGVEEAFYTTDRVMTVSF 210
*********************997.59******************************************************************** PP
class-1.txt 191 hkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksfn 285
hk+g+ +fPgtGd++dvg+ kgkyy++nvPl+dgidDesy+++fk+++ kv+e+f+P avvlqcGaDsl+gDrlg+fnlsikghaecv+f++sfn
BRADI1G37290.1 211 HKFGD-YFPGTGDIRDVGHSKGKYYSLNVPLDDGIDDESYQSLFKPIMGKVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRFMRSFN 304
*****.***************************************************************************************** PP
class-1.txt 286 lpllvlGGGGYtlrnvaRcwtyetavvl 313
+p+l+lGGGGYt+rnvaRcw+yet+v+l
BRADI1G37290.1 305 VPVLLLGGGGYTIRNVARCWCYETGVAL 332
*************************986 PP
|
Protein Sequence
(Fasta) | MDVSAGGGGN SLPTTGADGS KRRVCYFYDS EVGNYYYGQG HPMKPHRIRM THALLAHYGL 60
LDEMQVLKPH PARDRDLCRF HADDYVSFLR SVTPETQQDQ IRALKRFNVG EDCPVFDGLY 120
SFCQTYAGGS VGGAVKLNHG HDIAINWAGG LHHAKKCEAS GFCYVNDIVL AILELLKYHQ 180
RVLYVDIDIH HGDGVEEAFY TTDRVMTVSF HKFGDYFPGT GDIRDVGHSK GKYYSLNVPL 240
DDGIDDESYQ SLFKPIMGKV MEIFRPGAVV LQCGADSLSG DRLGCFNLSI KGHAECVRFM 300
RSFNVPVLLL GGGGYTIRNV ARCWCYETGV ALGHELTDKM PLNEYYEYFG PDYTLHVAPS 360
NMENKNTNRQ LDEIRSRLLD NLTKLRHAPS VQFQERPPEA ELPEQDEDQE NPDERHHADS 420
DVEMNDAKPL EDTGRRSSIQ SVRVKRESAE TESTDQDGSV VVAVEHARGT EPPVTDGVGS 480
SKQTPPIDAS SMAIDEPGAV RLEPESSNKL QEHPAMHQNS L 521Protein Fasta Sequence
>BRADI1G37290.1|Class-I|Brachypodium distachyon
MDVSAGGGGNSLPTTGADGSKRRVCYFYDSEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLDEMQVLKPHPARDRDLCRFHADDYVSFLRSVTPETQQDQIRALKRFNVGEDCPVFDGLYSFCQTYAGGSVGGAVKLNHGHDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKYHQRVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDVGHSKGKYYSLNVPLDDGIDDESYQSLFKPIMGKVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRFMRSFNVPVLLLGGGGYTIRNVARCWCYETGVALGHELTDKMPLNEYYEYFGPDYTLHVAPSNMENKNTNRQLDEIRSRLLDNLTKLRHAPSVQFQERPPEAELPEQDEDQENPDERHHADSDVEMNDAKPLEDTGRRSSIQSVRVKRESAETESTDQDGSVVVAVEHARGTEPPVTDGVGSSKQTPPIDASSMAIDEPGAVRLEPESSNKLQEHPAMHQNSL |
Nucleotide Sequence
(Fasta) | ATGGACGTCT CGGCCGGCGG CGGCGGCAAC TCCCTGCCCA CCACCGGCGC GGATGGCTCG 60
AAGCGCCGCG TCTGCTACTT CTACGACTCG GAGGTCGGCA ACTACTACTA CGGCCAGGGC 120
CACCCGATGA AGCCGCACCG CATCCGCATG ACCCACGCGC TGCTCGCCCA CTACGGCCTC 180
CTCGACGAGA TGCAGGTGCT CAAGCCGCAC CCCGCCCGCG ACCGGGACCT CTGCCGCTTC 240
CACGCCGACG ACTACGTCTC CTTCCTCCGC TCCGTCACCC CCGAGACGCA GCAGGACCAG 300
ATCCGCGCGC TCAAGCGATT CAACGTCGGC GAGGACTGCC CCGTCTTCGA CGGGCTCTAC 360
AGCTTCTGCC AGACCTACGC CGGCGGCTCC GTCGGCGGCG CCGTCAAGCT CAACCACGGC 420
CACGACATCG CCATCAACTG GGCCGGCGGC CTCCACCACG CCAAAAAGTG CGAGGCCTCC 480
GGCTTCTGCT ACGTCAACGA CATCGTCCTC GCTATCCTCG AGCTCCTCAA ATACCACCAG 540
CGTGTTCTCT ACGTCGATAT TGATATCCAC CATGGGGATG GCGTGGAGGA GGCGTTTTAC 600
ACGACCGACA GGGTGATGAC AGTCTCATTC CACAAATTTG GGGATTATTT CCCAGGGACA 660
GGCGACATTC GTGATGTTGG GCACTCCAAG GGGAAGTATT ATTCCTTGAA TGTCCCATTG 720
GATGACGGCA TAGATGATGA GAGTTACCAA TCGTTGTTCA AGCCAATCAT GGGCAAGGTT 780
ATGGAGATTT TCCGTCCTGG TGCGGTGGTG CTCCAGTGTG GAGCAGATTC CTTGTCAGGT 840
GACAGGTTGG GCTGCTTCAA CCTATCCATT AAGGGGCATG CTGAGTGTGT GAGATTCATG 900
AGGTCCTTTA ATGTTCCGGT TTTGCTGCTT GGTGGTGGTG GATATACCAT AAGAAATGTT 960
GCACGATGTT GGTGCTATGA GACAGGAGTC GCACTTGGTC ATGAGCTCAC TGACAAGATG 1020
CCGCTAAATG AGTATTATGA GTATTTCGGT CCAGATTATA CTCTTCATGT TGCACCAAGT 1080
AACATGGAGA ACAAAAACAC AAACCGGCAA TTGGATGAAA TAAGATCAAG ACTTCTTGAT 1140
AATCTTACAA AACTCCGACA TGCCCCTAGT GTACAGTTTC AAGAGCGACC TCCTGAGGCC 1200
GAGTTACCTG AGCAAGACGA AGATCAAGAG AATCCTGATG AAAGGCATCA TGCTGATTCT 1260
GATGTGGAAA TGAATGATGC CAAGCCTCTG GAGGACACTG GAAGGAGGAG CAGTATTCAG 1320
AGTGTGAGAG TTAAGAGAGA ATCTGCTGAA ACTGAGTCGA CAGATCAGGA TGGTAGTGTA 1380
GTAGTAGCTG TGGAACATGC AAGGGGCACA GAGCCACCTG TCACCGATGG AGTTGGCTCC 1440
TCTAAACAAA CCCCTCCTAT TGATGCAAGT TCGATGGCCA TAGACGAGCC GGGTGCTGTG 1500
AGGCTTGAAC CAGAGAGCTC AAACAAGTTA CAGGAACATC CTGCAATGCA TCAAAACAGT 1560
CTCTAAGCTG AGGCAGAGAG TTCAAGCAAT CTGCTGCACT AGGTTATCTA CCAGAATCCA 1620
AGATGATCTC TGTACCTTGG GAACTGGTGG TGCTTTGCAC AATGCTAAAT CTGTGATTTC 1680
TACATAGATG ATGGTTGACT TATCAGTGCC ATTCTTGAGC ATTAATTTAA CTCTGGCTGC 1740
TGTAGAGCAA TCGATGCAGT AATGCAGTAC AATTCAACGC TTACCGAGGA AGATGAAGTT 1800
TTGGCGCATC TTACTTAGAA AAATGTATAG GTAGGCGAGG CTTTGTTTTG GTGGGGGCTG 1860
TCTTCTCATG TAGTATGACA GAAGGGTGAT CTTGTAGTTG GTTAGGAGGA TTACTGCTAG 1920
CTGTGTTTTC AGTGCAAGTC TGTTTCACTG AAAATATTGT ATTCAGAATG CAAGTCCATT 1980
GGGGTATTGT GTGTTACTCA GCTATTTCTG TTCTTACAGT CTAATTTCAC AATGTAAGTC 2040
CATTGGGGTA TTGTGTGTTA CTCAGCTATT TCTGTTCTTA TAGTCTAATT TCACAATGCA 2100
AGTCCATTGG GGTATTGTGT GTT
2124Nucleotide Fasta Sequence
>BRADI1G37290.1|Class-I|Brachypodium distachyon
ATGGACGTCTCGGCCGGCGGCGGCGGCAACTCCCTGCCCACCACCGGCGCGGATGGCTCGAAGCGCCGCGTCTGCTACTTCTACGACTCGGAGGTCGGCAACTACTACTACGGCCAGGGCCACCCGATGAAGCCGCACCGCATCCGCATGACCCACGCGCTGCTCGCCCACTACGGCCTCCTCGACGAGATGCAGGTGCTCAAGCCGCACCCCGCCCGCGACCGGGACCTCTGCCGCTTCCACGCCGACGACTACGTCTCCTTCCTCCGCTCCGTCACCCCCGAGACGCAGCAGGACCAGATCCGCGCGCTCAAGCGATTCAACGTCGGCGAGGACTGCCCCGTCTTCGACGGGCTCTACAGCTTCTGCCAGACCTACGCCGGCGGCTCCGTCGGCGGCGCCGTCAAGCTCAACCACGGCCACGACATCGCCATCAACTGGGCCGGCGGCCTCCACCACGCCAAAAAGTGCGAGGCCTCCGGCTTCTGCTACGTCAACGACATCGTCCTCGCTATCCTCGAGCTCCTCAAATACCACCAGCGTGTTCTCTACGTCGATATTGATATCCACCATGGGGATGGCGTGGAGGAGGCGTTTTACACGACCGACAGGGTGATGACAGTCTCATTCCACAAATTTGGGGATTATTTCCCAGGGACAGGCGACATTCGTGATGTTGGGCACTCCAAGGGGAAGTATTATTCCTTGAATGTCCCATTGGATGACGGCATAGATGATGAGAGTTACCAATCGTTGTTCAAGCCAATCATGGGCAAGGTTATGGAGATTTTCCGTCCTGGTGCGGTGGTGCTCCAGTGTGGAGCAGATTCCTTGTCAGGTGACAGGTTGGGCTGCTTCAACCTATCCATTAAGGGGCATGCTGAGTGTGTGAGATTCATGAGGTCCTTTAATGTTCCGGTTTTGCTGCTTGGTGGTGGTGGATATACCATAAGAAATGTTGCACGATGTTGGTGCTATGAGACAGGAGTCGCACTTGGTCATGAGCTCACTGACAAGATGCCGCTAAATGAGTATTATGAGTATTTCGGTCCAGATTATACTCTTCATGTTGCACCAAGTAACATGGAGAACAAAAACACAAACCGGCAATTGGATGAAATAAGATCAAGACTTCTTGATAATCTTACAAAACTCCGACATGCCCCTAGTGTACAGTTTCAAGAGCGACCTCCTGAGGCCGAGTTACCTGAGCAAGACGAAGATCAAGAGAATCCTGATGAAAGGCATCATGCTGATTCTGATGTGGAAATGAATGATGCCAAGCCTCTGGAGGACACTGGAAGGAGGAGCAGTATTCAGAGTGTGAGAGTTAAGAGAGAATCTGCTGAAACTGAGTCGACAGATCAGGATGGTAGTGTAGTAGTAGCTGTGGAACATGCAAGGGGCACAGAGCCACCTGTCACCGATGGAGTTGGCTCCTCTAAACAAACCCCTCCTATTGATGCAAGTTCGATGGCCATAGACGAGCCGGGTGCTGTGAGGCTTGAACCAGAGAGCTCAAACAAGTTACAGGAACATCCTGCAATGCATCAAAACAGTCTCTAAGCTGAGGCAGAGAGTTCAAGCAATCTGCTGCACTAGGTTATCTACCAGAATCCAAGATGATCTCTGTACCTTGGGAACTGGTGGTGCTTTGCACAATGCTAAATCTGTGATTTCTACATAGATGATGGTTGACTTATCAGTGCCATTCTTGAGCATTAATTTAACTCTGGCTGCTGTAGAGCAATCGATGCAGTAATGCAGTACAATTCAACGCTTACCGAGGAAGATGAAGTTTTGGCGCATCTTACTTAGAAAAATGTATAGGTAGGCGAGGCTTTGTTTTGGTGGGGGCTGTCTTCTCATGTAGTATGACAGAAGGGTGATCTTGTAGTTGGTTAGGAGGATTACTGCTAGCTGTGTTTTCAGTGCAAGTCTGTTTCACTGAAAATATTGTATTCAGAATGCAAGTCCATTGGGGTATTGTGTGTTACTCAGCTATTTCTGTTCTTACAGTCTAATTTCACAATGTAAGTCCATTGGGGTATTGTGTGTTACTCAGCTATTTCTGTTCTTATAGTCTAATTTCACAATGCAAGTCCATTGGGGTATTGTGTGTT
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
