Tag |
Content |
WERAM ID |
WERAM-Ori-0039 |
Ensembl Protein ID |
BGIOSGA012324-PA |
Gene Name |
OsI_10942 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-I |
1.60e-163 |
544.6 |
22 |
332 |
|
Organism |
Oryza indica |
Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcP 93 ++v+y+yd +vg+y+ygq+hpmkp+r+++th L+ +ygl +++++kp+ a+ ++l++fh+++y+ fl++v+pe++++ ++ lk+fnvgedcP BGIOSGA012324-PA 22 RRVCYFYDAEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLDQMQVLKPHPARDRDLCRFHADDYVAFLRSVTPETQQDQIRALKRFNVGEDCP 114 589****************************************************************************************** PP class-1.txt 94 vfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvm 186 vfdgl+++cq+++G+s+ +a kLn++ diainwaGGlhhakk+easGfcyvnDivlailellk+h+rvly+did+hhGDgveeafyttdrvm BGIOSGA012324-PA 115 VFDGLYSFCQTYAGGSVGGAVKLNHG-HDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKYHQRVLYVDIDIHHGDGVEEAFYTTDRVM 206 ***********************997.59**************************************************************** PP class-1.txt 187 tvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvk 279 tvsfhk+g+ +fPgtGd++d+g+ kgkyy++nvPl+dgidDesy+++fk+++ kv+e+f+P avvlqcGaDsl+gDrlg+fnlsi+ghaecv+ BGIOSGA012324-PA 207 TVSFHKFGD-YFPGTGDIRDIGHSKGKYYSLNVPLDDGIDDESYQSLFKPIMGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVR 298 *********.*********************************************************************************** PP class-1.txt 280 fvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313 f++sfn+pll+lGGGGYt+rnvaRcw+yet+v+l BGIOSGA012324-PA 299 FMRSFNVPLLLLGGGGYTIRNVARCWCYETGVAL 332 *******************************986 PP
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Protein Sequence (Fasta) | MDASAGGGGN SLPTAGADGA KRRVCYFYDA EVGNYYYGQG HPMKPHRIRM THALLAHYGL 60 LDQMQVLKPH PARDRDLCRF HADDYVAFLR SVTPETQQDQ IRALKRFNVG EDCPVFDGLY 120 SFCQTYAGGS VGGAVKLNHG HDIAINWAGG LHHAKKCEAS GFCYVNDIVL AILELLKYHQ 180 RVLYVDIDIH HGDGVEEAFY TTDRVMTVSF HKFGDYFPGT GDIRDIGHSK GKYYSLNVPL 240 DDGIDDESYQ SLFKPIMGKV MEVFRPGAVV LQCGADSLSG DRLGCFNLSI RGHAECVRFM 300 RSFNVPLLLL GGGGYTIRNV ARCWCYETGV ALGHELTDKM PPNEYFEYFG PDYTLHVAPS 360 NMENKNTRQQ LDDIRSRLLD NLSKLRHAPS VQFQERPPEA ELPEQDEDQE DPDERHHADS 420 DVEMDDVKPL DDSGRRSSIQ NVRVKRESAE TDAADQLLWL MCAQSHCDET IKGTIKTVLQ 480 VQQASFDDKY LGLPTPLGRM KAGRFQALKE RFEKRLSEWC EKNLSMGGKE VLIKSVLQAL 540 PTYVMSVFRL PASLCEEYMQ LIRKFWWGED QNNRKVHWIS WQQLIKPKGQ GGIGFRDLKL 600 FNQALLARQA WRLIQYPSSL CAQVLKAKYF PSGDLIDTAF PVDSSETWKG IMHGLELLKK 660 GLIWRISDGS KVKIWRDNWI PREHNLKVIG RKTRSRLKWV SDLLLPDRQQ WNEELVRNMF 720 YPPDAEGILR IQLPHSPGED IVAWHYDKSG IFTVRSAYKV ALDALLRSDN TGESSSAPNG 780 ERTLWKNIWN TQVPQKVRIF AWRLARDCLA TQAKKKRRNI VKSPVCEICG KCEEDGFHAT 840 VACTKARALR SEMRIYWNLP LEEIFVQNGP DWLLLLLQQA DPHTRAETLL LLWRAWYLRN 900 NVVHGNGQAS VKGSVLFLQT YAEVLLTSQQ KPDDPKGKGI AGVVGPSAKC AARPRRVGQR 960 T 961Protein Fasta Sequence
>BGIOSGA012324-PA|Class-I|Oryza indica MDASAGGGGNSLPTAGADGAKRRVCYFYDAEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLDQMQVLKPHPARDRDLCRFHADDYVAFLRSVTPETQQDQIRALKRFNVGEDCPVFDGLYSFCQTYAGGSVGGAVKLNHGHDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKYHQRVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGHSKGKYYSLNVPLDDGIDDESYQSLFKPIMGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVRFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGHELTDKMPPNEYFEYFGPDYTLHVAPSNMENKNTRQQLDDIRSRLLDNLSKLRHAPSVQFQERPPEAELPEQDEDQEDPDERHHADSDVEMDDVKPLDDSGRRSSIQNVRVKRESAETDAADQLLWLMCAQSHCDETIKGTIKTVLQVQQASFDDKYLGLPTPLGRMKAGRFQALKERFEKRLSEWCEKNLSMGGKEVLIKSVLQALPTYVMSVFRLPASLCEEYMQLIRKFWWGEDQNNRKVHWISWQQLIKPKGQGGIGFRDLKLFNQALLARQAWRLIQYPSSLCAQVLKAKYFPSGDLIDTAFPVDSSETWKGIMHGLELLKKGLIWRISDGSKVKIWRDNWIPREHNLKVIGRKTRSRLKWVSDLLLPDRQQWNEELVRNMFYPPDAEGILRIQLPHSPGEDIVAWHYDKSGIFTVRSAYKVALDALLRSDNTGESSSAPNGERTLWKNIWNTQVPQKVRIFAWRLARDCLATQAKKKRRNIVKSPVCEICGKCEEDGFHATVACTKARALRSEMRIYWNLPLEEIFVQNGPDWLLLLLQQADPHTRAETLLLLWRAWYLRNNVVHGNGQASVKGSVLFLQTYAEVLLTSQQKPDDPKGKGIAGVVGPSAKCAARPRRVGQRT
|
Nucleotide Sequence (Fasta) | ATGGACGCCT CCGCCGGAGG CGGGGGGAAC TCGCTGCCGA CGGCGGGGGC CGACGGGGCC 60 AAGCGGCGGG TGTGCTACTT CTACGACGCG GAGGTGGGGA ACTACTACTA CGGGCAGGGG 120 CACCCGATGA AGCCCCACCG CATCCGGATG ACCCACGCGC TGCTCGCCCA CTACGGCCTC 180 CTCGACCAGA TGCAGGTGCT CAAGCCCCAC CCGGCGCGCG ACCGCGACCT CTGCCGCTTC 240 CACGCCGACG ACTACGTCGC CTTCCTCCGC TCCGTCACGC CGGAGACCCA GCAGGACCAG 300 ATCCGGGCGC TCAAGCGCTT CAACGTCGGC GAGGACTGCC CCGTCTTCGA CGGCCTCTAC 360 AGCTTCTGCC AGACCTACGC CGGGGGATCC GTCGGCGGCG CCGTCAAGCT CAACCACGGC 420 CACGACATCG CCATCAACTG GGCCGGCGGC CTCCACCACG CCAAGAAGTG CGAGGCCTCC 480 GGCTTCTGCT ACGTCAACGA CATCGTCCTC GCCATCCTCG AGCTCCTCAA ATACCACCAG 540 CGTGTTCTCT ATGTGGACAT CGATATCCAC CATGGGGATG GTGTGGAGGA GGCGTTTTAC 600 ACGACGGACA GGGTGATGAC GGTCTCGTTC CACAAGTTTG GGGATTATTT CCCGGGGACC 660 GGGGACATTC GCGATATTGG GCACTCAAAG GGGAAGTATT ACTCTCTGAA TGTCCCGTTG 720 GACGACGGTA TTGACGATGA GAGCTACCAG TCGTTGTTCA AGCCGATCAT GGGGAAGGTG 780 ATGGAGGTTT TTCGCCCTGG CGCGGTGGTG CTCCAGTGTG GTGCGGACTC TCTGTCAGGT 840 GATCGGTTGG GTTGCTTCAA CCTATCGATC AGGGGCCACG CGGAATGTGT GAGATTCATG 900 AGGTCCTTCA ACGTCCCGCT GTTGCTGCTT GGTGGTGGTG GGTATACCAT AAGAAATGTT 960 GCACGGTGTT GGTGCTATGA GACAGGAGTT GCACTTGGTC ATGAGCTCAC CGACAAGATG 1020 CCTCCAAATG AGTATTTTGA GTACTTTGGT CCAGATTATA CACTTCATGT TGCACCAAGT 1080 AACATGGAGA ACAAAAACAC ACGCCAGCAA TTGGATGATA TAAGATCAAG ACTTCTTGAT 1140 AATCTTTCAA AACTTCGACA TGCTCCTAGC GTCCAATTTC AAGAGCGACC CCCTGAGGCT 1200 GAGCTACCTG AGCAAGATGA AGACCAAGAG GATCCTGATG AAAGGCATCA TGCTGATTCT 1260 GATGTGGAAA TGGATGATGT CAAACCTTTG GATGACTCAG GAAGGAGGAG CAGTATTCAG 1320 AATGTGAGAG TTAAGAGAGA GTCTGCTGAA ACAGATGCTG CAGATCAGTT GTTATGGTTA 1380 ATGTGTGCTC AAAGCCACTG TGATGAGACC ATAAAGGGGA CCATTAAAAC AGTCCTGCAA 1440 GTCCAACAAG CCTCTTTTGA TGACAAGTAT CTGGGATTAC CCACCCCATT GGGAAGGATG 1500 AAAGCAGGAA GGTTTCAGGC CTTGAAAGAG AGATTTGAAA AACGTCTGTC AGAATGGTGT 1560 GAGAAAAACC TGTCTATGGG AGGAAAAGAA GTTCTCATCA AATCAGTGCT GCAGGCGCTG 1620 CCTACGTATG TAATGAGTGT GTTTCGGCTT CCAGCAAGTC TTTGTGAGGA ATATATGCAA 1680 CTCATAAGAA AATTCTGGTG GGGAGAGGAT CAGAACAACC GGAAGGTTCA CTGGATTTCT 1740 TGGCAACAGT TGATTAAACC GAAAGGCCAG GGAGGGATTG GTTTCAGGGA TTTGAAACTT 1800 TTTAATCAAG CCCTTCTCGC ACGCCAAGCC TGGAGGCTGA TTCAGTATCC GTCAAGTCTG 1860 TGTGCCCAAG TTCTTAAAGC CAAATACTTT CCGAGTGGGG ATTTAATTGA CACTGCTTTC 1920 CCTGTTGATT CGTCTGAAAC TTGGAAAGGA ATAATGCATG GGCTGGAGTT GCTAAAAAAG 1980 GGTCTAATCT GGCGTATTAG TGATGGCAGT AAAGTGAAAA TTTGGAGAGA TAATTGGATT 2040 CCTAGGGAGC ATAACCTGAA AGTTATTGGT CGAAAAACTC GTTCCAGACT GAAGTGGGTT 2100 TCTGACCTGC TATTGCCGGA CCGCCAACAG TGGAATGAGG AGCTAGTGCG AAACATGTTT 2160 TACCCCCCTG ATGCGGAGGG GATCCTTCGG ATTCAGCTCC CGCATAGCCC CGGGGAGGAT 2220 ATTGTGGCCT GGCACTATGA CAAGTCGGGA ATCTTCACTG TTAGGAGTGC TTACAAGGTA 2280 GCTTTGGATG CACTTCTGCG ATCCGACAAT ACTGGAGAGT CCAGTTCAGC GCCGAACGGC 2340 GAAAGAACGT TATGGAAGAA TATTTGGAAT ACCCAGGTTC CACAGAAAGT TCGTATCTTT 2400 GCGTGGAGGT TAGCACGGGA TTGTCTAGCC ACACAAGCTA AGAAGAAACG CAGAAACATT 2460 GTAAAATCCC CTGTTTGTGA GATATGTGGA AAATGCGAAG AAGATGGATT CCACGCGACG 2520 GTGGCCTGTA CTAAAGCCCG AGCTCTACGA TCTGAAATGC GCATTTACTG GAATCTGCCC 2580 CTGGAAGAGA TTTTCGTTCA GAATGGGCCT GATTGGCTGC TACTTCTACT GCAACAAGCT 2640 GACCCCCACA CTAGAGCAGA AACCCTCTTA TTGCTGTGGA GGGCCTGGTA CCTACGAAAT 2700 AATGTTGTTC ATGGTAATGG ACAAGCTTCA GTCAAGGGCT CAGTGCTTTT TCTTCAGACT 2760 TATGCTGAGG TACTGCTTAC CTCCCAGCAG AAACCTGATG ATCCAAAAGG AAAGGGGATA 2820 GCTGGGGTAG TAGGACCTTC AGCTAAATGT GCAGCTCGCC CTAGAAGGGT TGGTCAAAGA 2880 ACCTAG
2887Nucleotide Fasta Sequence
>BGIOSGA012324-PA|Class-I|Oryza indica ATGGACGCCTCCGCCGGAGGCGGGGGGAACTCGCTGCCGACGGCGGGGGCCGACGGGGCCAAGCGGCGGGTGTGCTACTTCTACGACGCGGAGGTGGGGAACTACTACTACGGGCAGGGGCACCCGATGAAGCCCCACCGCATCCGGATGACCCACGCGCTGCTCGCCCACTACGGCCTCCTCGACCAGATGCAGGTGCTCAAGCCCCACCCGGCGCGCGACCGCGACCTCTGCCGCTTCCACGCCGACGACTACGTCGCCTTCCTCCGCTCCGTCACGCCGGAGACCCAGCAGGACCAGATCCGGGCGCTCAAGCGCTTCAACGTCGGCGAGGACTGCCCCGTCTTCGACGGCCTCTACAGCTTCTGCCAGACCTACGCCGGGGGATCCGTCGGCGGCGCCGTCAAGCTCAACCACGGCCACGACATCGCCATCAACTGGGCCGGCGGCCTCCACCACGCCAAGAAGTGCGAGGCCTCCGGCTTCTGCTACGTCAACGACATCGTCCTCGCCATCCTCGAGCTCCTCAAATACCACCAGCGTGTTCTCTATGTGGACATCGATATCCACCATGGGGATGGTGTGGAGGAGGCGTTTTACACGACGGACAGGGTGATGACGGTCTCGTTCCACAAGTTTGGGGATTATTTCCCGGGGACCGGGGACATTCGCGATATTGGGCACTCAAAGGGGAAGTATTACTCTCTGAATGTCCCGTTGGACGACGGTATTGACGATGAGAGCTACCAGTCGTTGTTCAAGCCGATCATGGGGAAGGTGATGGAGGTTTTTCGCCCTGGCGCGGTGGTGCTCCAGTGTGGTGCGGACTCTCTGTCAGGTGATCGGTTGGGTTGCTTCAACCTATCGATCAGGGGCCACGCGGAATGTGTGAGATTCATGAGGTCCTTCAACGTCCCGCTGTTGCTGCTTGGTGGTGGTGGGTATACCATAAGAAATGTTGCACGGTGTTGGTGCTATGAGACAGGAGTTGCACTTGGTCATGAGCTCACCGACAAGATGCCTCCAAATGAGTATTTTGAGTACTTTGGTCCAGATTATACACTTCATGTTGCACCAAGTAACATGGAGAACAAAAACACACGCCAGCAATTGGATGATATAAGATCAAGACTTCTTGATAATCTTTCAAAACTTCGACATGCTCCTAGCGTCCAATTTCAAGAGCGACCCCCTGAGGCTGAGCTACCTGAGCAAGATGAAGACCAAGAGGATCCTGATGAAAGGCATCATGCTGATTCTGATGTGGAAATGGATGATGTCAAACCTTTGGATGACTCAGGAAGGAGGAGCAGTATTCAGAATGTGAGAGTTAAGAGAGAGTCTGCTGAAACAGATGCTGCAGATCAGTTGTTATGGTTAATGTGTGCTCAAAGCCACTGTGATGAGACCATAAAGGGGACCATTAAAACAGTCCTGCAAGTCCAACAAGCCTCTTTTGATGACAAGTATCTGGGATTACCCACCCCATTGGGAAGGATGAAAGCAGGAAGGTTTCAGGCCTTGAAAGAGAGATTTGAAAAACGTCTGTCAGAATGGTGTGAGAAAAACCTGTCTATGGGAGGAAAAGAAGTTCTCATCAAATCAGTGCTGCAGGCGCTGCCTACGTATGTAATGAGTGTGTTTCGGCTTCCAGCAAGTCTTTGTGAGGAATATATGCAACTCATAAGAAAATTCTGGTGGGGAGAGGATCAGAACAACCGGAAGGTTCACTGGATTTCTTGGCAACAGTTGATTAAACCGAAAGGCCAGGGAGGGATTGGTTTCAGGGATTTGAAACTTTTTAATCAAGCCCTTCTCGCACGCCAAGCCTGGAGGCTGATTCAGTATCCGTCAAGTCTGTGTGCCCAAGTTCTTAAAGCCAAATACTTTCCGAGTGGGGATTTAATTGACACTGCTTTCCCTGTTGATTCGTCTGAAACTTGGAAAGGAATAATGCATGGGCTGGAGTTGCTAAAAAAGGGTCTAATCTGGCGTATTAGTGATGGCAGTAAAGTGAAAATTTGGAGAGATAATTGGATTCCTAGGGAGCATAACCTGAAAGTTATTGGTCGAAAAACTCGTTCCAGACTGAAGTGGGTTTCTGACCTGCTATTGCCGGACCGCCAACAGTGGAATGAGGAGCTAGTGCGAAACATGTTTTACCCCCCTGATGCGGAGGGGATCCTTCGGATTCAGCTCCCGCATAGCCCCGGGGAGGATATTGTGGCCTGGCACTATGACAAGTCGGGAATCTTCACTGTTAGGAGTGCTTACAAGGTAGCTTTGGATGCACTTCTGCGATCCGACAATACTGGAGAGTCCAGTTCAGCGCCGAACGGCGAAAGAACGTTATGGAAGAATATTTGGAATACCCAGGTTCCACAGAAAGTTCGTATCTTTGCGTGGAGGTTAGCACGGGATTGTCTAGCCACACAAGCTAAGAAGAAACGCAGAAACATTGTAAAATCCCCTGTTTGTGAGATATGTGGAAAATGCGAAGAAGATGGATTCCACGCGACGGTGGCCTGTACTAAAGCCCGAGCTCTACGATCTGAAATGCGCATTTACTGGAATCTGCCCCTGGAAGAGATTTTCGTTCAGAATGGGCCTGATTGGCTGCTACTTCTACTGCAACAAGCTGACCCCCACACTAGAGCAGAAACCCTCTTATTGCTGTGGAGGGCCTGGTACCTACGAAATAATGTTGTTCATGGTAATGGACAAGCTTCAGTCAAGGGCTCAGTGCTTTTTCTTCAGACTTATGCTGAGGTACTGCTTACCTCCCAGCAGAAACCTGATGATCCAAAAGGAAAGGGGATAGCTGGGGTAGTAGGACCTTCAGCTAAATGTGCAGCTCGCCCTAGAAGGGTTGGTCAAAGAACCTAG
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |