Tag |
Content |
WERAM ID |
WERAM-Brr-0094 |
Ensembl Protein ID |
Bra018073.1-P |
Gene Name |
|
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-I |
1.40e-117 |
393.8 |
14 |
318 |
|
Organism |
Brassica rapa |
Domain Profile |
HDAC Class-I
class-1.txt 2 kvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvge.dcPvfd 96 +v+y+y+++ +g+++ ++++ th+L+ +y l + ++i++p+ a+ ++++kfhs eyi+fl++v+ ++ + ++k+fn++ d+Pvf+ Bra018073.1-P 14 RVSYFYEPT-----IGVGNGRESQQIRTTHNLIGSYYLPRYMDIIRPRAAQPSDFTKFHSPEYISFLSSVTRRLKSATDPSFKRFNLDAwDSPVFS 104 688888888.....578999999*****************************************************************88****** PP class-1.txt 97 glfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvmtvsfhk 192 glfeyc+l++G+s+ aa+kLn++eadiainw+GG+h ak ++a Gf yvnD+vl+ilellk +krvlyidi hhG+ v+eaf++tdrvmt+sfh+ Bra018073.1-P 105 GLFEYCRLYAGGSICAAEKLNRHEADIAINWSGGMHRAKIDKACGFGYVNDVVLGILELLKVFKRVLYIDIGYHHGEAVQEAFHKTDRVMTLSFHN 200 ************************************************************************************************ PP class-1.txt 193 ygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksfnlpl 288 g+ Gd++d+g++kg yy++n Plk+g+dD s++++f ++i k +e+++Pea+vl cG Dsl+gD lg+fnl++kgh+ c+ ++++fn+pl Bra018073.1-P 201 SGD---QRRGDITDYGVGKGEYYSLNAPLKNGLDDASFTTLFVPIIGKAMEVYQPEAIVLLCGPDSLSGDALGKFNLTVKGHGACLGYIRTFNVPL 293 ***...799*************************************************************************************** PP class-1.txt 289 lvlGGGGYtlrnvaRcwtyetavvl 313 ++lGG G+tl nvaRcw+yet++++ Bra018073.1-P 294 MLLGGQGHTLGNVARCWCYETGIAV 318 **********************986 PP
|
Protein Sequence (Fasta) | MASLASGPDG TKRRVSYFYE PTIGVGNGRE SQQIRTTHNL IGSYYLPRYM DIIRPRAAQP 60 SDFTKFHSPE YISFLSSVTR RLKSATDPSF KRFNLDAWDS PVFSGLFEYC RLYAGGSICA 120 AEKLNRHEAD IAINWSGGMH RAKIDKACGF GYVNDVVLGI LELLKVFKRV LYIDIGYHHG 180 EAVQEAFHKT DRVMTLSFHN SGDQRRGDIT DYGVGKGEYY SLNAPLKNGL DDASFTTLFV 240 PIIGKAMEVY QPEAIVLLCG PDSLSGDALG KFNLTVKGHG ACLGYIRTFN VPLMLLGGQG 300 HTLGNVARCW CYETGIAVGK ELNDDCPMIA DDDCFAPDYK LHIEPNHMEN LNTDGDIEKI 360 KKTLLKQLSQ VIHAPSVQFQ DTPPISQVTE EAEEDMETR 399Protein Fasta Sequence
>Bra018073.1-P|Class-I|Brassica rapa MASLASGPDGTKRRVSYFYEPTIGVGNGRESQQIRTTHNLIGSYYLPRYMDIIRPRAAQPSDFTKFHSPEYISFLSSVTRRLKSATDPSFKRFNLDAWDSPVFSGLFEYCRLYAGGSICAAEKLNRHEADIAINWSGGMHRAKIDKACGFGYVNDVVLGILELLKVFKRVLYIDIGYHHGEAVQEAFHKTDRVMTLSFHNSGDQRRGDITDYGVGKGEYYSLNAPLKNGLDDASFTTLFVPIIGKAMEVYQPEAIVLLCGPDSLSGDALGKFNLTVKGHGACLGYIRTFNVPLMLLGGQGHTLGNVARCWCYETGIAVGKELNDDCPMIADDDCFAPDYKLHIEPNHMENLNTDGDIEKIKKTLLKQLSQVIHAPSVQFQDTPPISQVTEEAEEDMETR
|
Nucleotide Sequence (Fasta) | ATGGCGAGCT TGGCTTCGGG TCCCGACGGA ACGAAACGGC GCGTGAGCTA CTTCTACGAG 60 CCAACGATCG GAGTTGGAAA TGGACGAGAA TCCCAACAGA TCCGTACGAC TCACAACCTC 120 ATCGGCAGCT ATTACCTCCC CCGCTACATG GATATCATCC GCCCTCGCGC TGCCCAGCCT 180 TCAGATTTCA CTAAATTCCA CTCGCCGGAG TACATATCAT TCCTCAGCTC AGTCACTCGC 240 CGGTTGAAAT CCGCGACGGA TCCTTCCTTC AAGCGCTTCA ACTTAGACGC GTGGGACTCC 300 CCTGTCTTCA GTGGCCTCTT CGAATATTGC CGTCTCTACG CCGGTGGTTC TATTTGCGCC 360 GCCGAGAAAC TGAACCGACA CGAAGCTGAT ATCGCCATCA ATTGGTCCGG CGGGATGCAC 420 CGTGCCAAGA TAGATAAGGC TTGTGGCTTT GGCTACGTCA ACGACGTTGT TCTTGGGATC 480 CTCGAGTTGC TTAAGGTCTT CAAGCGAGTA CTCTACATAG ATATTGGCTA TCACCATGGG 540 GAAGCAGTAC AAGAAGCATT CCACAAAACT GATAGAGTTA TGACTCTTTC TTTCCACAAC 600 TCTGGGGACC AAAGAAGAGG AGATATAACG GACTACGGGG TAGGAAAGGG AGAATACTAT 660 TCTCTAAATG CACCACTGAA GAATGGTCTG GACGATGCAA GTTTCACCAC TTTATTTGTA 720 CCTATTATCG GCAAGGCTAT GGAGGTTTAT CAACCAGAAG CAATTGTTCT TCTGTGCGGC 780 CCTGATTCAT TATCTGGTGA TGCGTTGGGT AAATTCAACT TGACTGTCAA GGGTCATGGT 840 GCTTGTCTCG GGTACATAAG AACATTTAAT GTTCCTCTCA TGCTCTTGGG TGGTCAAGGT 900 CACACTCTTG GAAATGTTGC ACGTTGCTGG TGCTATGAGA CAGGTATTGC GGTTGGAAAA 960 GAACTCAACG ACGATTGCCC TATGATTGCG GACGACGATT GTTTTGCCCC AGATTATAAA 1020 CTTCATATCG AGCCAAACCA CATGGAGAAT TTAAACACAG ACGGAGATAT TGAAAAAATA 1080 AAGAAGACAT TACTAAAGCA ACTTTCGCAA GTGATACACG CACCTAGTGT GCAGTTTCAA 1140 GACACTCCAC CAATCAGTCA AGTTACAGAA GAAGCGGAAG AGGACATGGA GACGAGATAA 1200
1201Nucleotide Fasta Sequence
>Bra018073.1-P|Class-I|Brassica rapa ATGGCGAGCTTGGCTTCGGGTCCCGACGGAACGAAACGGCGCGTGAGCTACTTCTACGAGCCAACGATCGGAGTTGGAAATGGACGAGAATCCCAACAGATCCGTACGACTCACAACCTCATCGGCAGCTATTACCTCCCCCGCTACATGGATATCATCCGCCCTCGCGCTGCCCAGCCTTCAGATTTCACTAAATTCCACTCGCCGGAGTACATATCATTCCTCAGCTCAGTCACTCGCCGGTTGAAATCCGCGACGGATCCTTCCTTCAAGCGCTTCAACTTAGACGCGTGGGACTCCCCTGTCTTCAGTGGCCTCTTCGAATATTGCCGTCTCTACGCCGGTGGTTCTATTTGCGCCGCCGAGAAACTGAACCGACACGAAGCTGATATCGCCATCAATTGGTCCGGCGGGATGCACCGTGCCAAGATAGATAAGGCTTGTGGCTTTGGCTACGTCAACGACGTTGTTCTTGGGATCCTCGAGTTGCTTAAGGTCTTCAAGCGAGTACTCTACATAGATATTGGCTATCACCATGGGGAAGCAGTACAAGAAGCATTCCACAAAACTGATAGAGTTATGACTCTTTCTTTCCACAACTCTGGGGACCAAAGAAGAGGAGATATAACGGACTACGGGGTAGGAAAGGGAGAATACTATTCTCTAAATGCACCACTGAAGAATGGTCTGGACGATGCAAGTTTCACCACTTTATTTGTACCTATTATCGGCAAGGCTATGGAGGTTTATCAACCAGAAGCAATTGTTCTTCTGTGCGGCCCTGATTCATTATCTGGTGATGCGTTGGGTAAATTCAACTTGACTGTCAAGGGTCATGGTGCTTGTCTCGGGTACATAAGAACATTTAATGTTCCTCTCATGCTCTTGGGTGGTCAAGGTCACACTCTTGGAAATGTTGCACGTTGCTGGTGCTATGAGACAGGTATTGCGGTTGGAAAAGAACTCAACGACGATTGCCCTATGATTGCGGACGACGATTGTTTTGCCCCAGATTATAAACTTCATATCGAGCCAAACCACATGGAGAATTTAAACACAGACGGAGATATTGAAAAAATAAAGAAGACATTACTAAAGCAACTTTCGCAAGTGATACACGCACCTAGTGTGCAGTTTCAAGACACTCCACCAATCAGTCAAGTTACAGAAGAAGCGGAAGAGGACATGGAGACGAGATAA
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |