WERAM Information


Tag Content
WERAM ID WERAM-Brr-0094
Ensembl Protein ID Bra018073.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra018073 Bra018073.1 Bra018073.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 1.40e-117 393.8 14 318
Organism Brassica rapa
Domain Profile
  HDAC Class-I

    class-1.txt   2 kvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvge.dcPvfd 96 
+v+y+y+++ +g+++ ++++ th+L+ +y l + ++i++p+ a+ ++++kfhs eyi+fl++v+ ++ + ++k+fn++ d+Pvf+
Bra018073.1-P 14 RVSYFYEPT-----IGVGNGRESQQIRTTHNLIGSYYLPRYMDIIRPRAAQPSDFTKFHSPEYISFLSSVTRRLKSATDPSFKRFNLDAwDSPVFS 104
688888888.....578999999*****************************************************************88****** PP
class-1.txt 97 glfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvmtvsfhk 192
glfeyc+l++G+s+ aa+kLn++eadiainw+GG+h ak ++a Gf yvnD+vl+ilellk +krvlyidi hhG+ v+eaf++tdrvmt+sfh+
Bra018073.1-P 105 GLFEYCRLYAGGSICAAEKLNRHEADIAINWSGGMHRAKIDKACGFGYVNDVVLGILELLKVFKRVLYIDIGYHHGEAVQEAFHKTDRVMTLSFHN 200
************************************************************************************************ PP
class-1.txt 193 ygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksfnlpl 288
g+ Gd++d+g++kg yy++n Plk+g+dD s++++f ++i k +e+++Pea+vl cG Dsl+gD lg+fnl++kgh+ c+ ++++fn+pl
Bra018073.1-P 201 SGD---QRRGDITDYGVGKGEYYSLNAPLKNGLDDASFTTLFVPIIGKAMEVYQPEAIVLLCGPDSLSGDALGKFNLTVKGHGACLGYIRTFNVPL 293
***...799*************************************************************************************** PP
class-1.txt 289 lvlGGGGYtlrnvaRcwtyetavvl 313
++lGG G+tl nvaRcw+yet++++
Bra018073.1-P 294 MLLGGQGHTLGNVARCWCYETGIAV 318
**********************986 PP

Protein Sequence
(Fasta)
MASLASGPDG TKRRVSYFYE PTIGVGNGRE SQQIRTTHNL IGSYYLPRYM DIIRPRAAQP 60
SDFTKFHSPE YISFLSSVTR RLKSATDPSF KRFNLDAWDS PVFSGLFEYC RLYAGGSICA 120
AEKLNRHEAD IAINWSGGMH RAKIDKACGF GYVNDVVLGI LELLKVFKRV LYIDIGYHHG 180
EAVQEAFHKT DRVMTLSFHN SGDQRRGDIT DYGVGKGEYY SLNAPLKNGL DDASFTTLFV 240
PIIGKAMEVY QPEAIVLLCG PDSLSGDALG KFNLTVKGHG ACLGYIRTFN VPLMLLGGQG 300
HTLGNVARCW CYETGIAVGK ELNDDCPMIA DDDCFAPDYK LHIEPNHMEN LNTDGDIEKI 360
KKTLLKQLSQ VIHAPSVQFQ DTPPISQVTE EAEEDMETR 399
Nucleotide Sequence
(Fasta)
ATGGCGAGCT TGGCTTCGGG TCCCGACGGA ACGAAACGGC GCGTGAGCTA CTTCTACGAG 60
CCAACGATCG GAGTTGGAAA TGGACGAGAA TCCCAACAGA TCCGTACGAC TCACAACCTC 120
ATCGGCAGCT ATTACCTCCC CCGCTACATG GATATCATCC GCCCTCGCGC TGCCCAGCCT 180
TCAGATTTCA CTAAATTCCA CTCGCCGGAG TACATATCAT TCCTCAGCTC AGTCACTCGC 240
CGGTTGAAAT CCGCGACGGA TCCTTCCTTC AAGCGCTTCA ACTTAGACGC GTGGGACTCC 300
CCTGTCTTCA GTGGCCTCTT CGAATATTGC CGTCTCTACG CCGGTGGTTC TATTTGCGCC 360
GCCGAGAAAC TGAACCGACA CGAAGCTGAT ATCGCCATCA ATTGGTCCGG CGGGATGCAC 420
CGTGCCAAGA TAGATAAGGC TTGTGGCTTT GGCTACGTCA ACGACGTTGT TCTTGGGATC 480
CTCGAGTTGC TTAAGGTCTT CAAGCGAGTA CTCTACATAG ATATTGGCTA TCACCATGGG 540
GAAGCAGTAC AAGAAGCATT CCACAAAACT GATAGAGTTA TGACTCTTTC TTTCCACAAC 600
TCTGGGGACC AAAGAAGAGG AGATATAACG GACTACGGGG TAGGAAAGGG AGAATACTAT 660
TCTCTAAATG CACCACTGAA GAATGGTCTG GACGATGCAA GTTTCACCAC TTTATTTGTA 720
CCTATTATCG GCAAGGCTAT GGAGGTTTAT CAACCAGAAG CAATTGTTCT TCTGTGCGGC 780
CCTGATTCAT TATCTGGTGA TGCGTTGGGT AAATTCAACT TGACTGTCAA GGGTCATGGT 840
GCTTGTCTCG GGTACATAAG AACATTTAAT GTTCCTCTCA TGCTCTTGGG TGGTCAAGGT 900
CACACTCTTG GAAATGTTGC ACGTTGCTGG TGCTATGAGA CAGGTATTGC GGTTGGAAAA 960
GAACTCAACG ACGATTGCCC TATGATTGCG GACGACGATT GTTTTGCCCC AGATTATAAA 1020
CTTCATATCG AGCCAAACCA CATGGAGAAT TTAAACACAG ACGGAGATAT TGAAAAAATA 1080
AAGAAGACAT TACTAAAGCA ACTTTCGCAA GTGATACACG CACCTAGTGT GCAGTTTCAA 1140
GACACTCCAC CAATCAGTCA AGTTACAGAA GAAGCGGAAG AGGACATGGA GACGAGATAA 1200
1201
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0150 Bo8g076780.1 Brassica oleracea 90 0.0 744
WERAM-Art-0132 AT5G35600.1 Arabidopsis thaliana 64 9e-146 513
WERAM-Arl-0113 fgenesh2_kg.8__ 2309__ AT5G63110.1 Arabidopsis lyrata 61 2e-137 486
WERAM-Thc-0029 EOY20838 Theobroma cacao 59 9e-133 470
WERAM-Viv-0108 VIT_17s0000g09070.t01 Vitis vinifera 58 6e-130 461
WERAM-Glm-0046 GLYMA05G02540.1 Glycine max 58 1e-129 460
WERAM-Pot-0149 POPTR_0015s09400.1 Populus trichocarpa 58 3e-129 459
WERAM-Sol-0082 Solyc06g071680.2.1 Solanum lycopersicum 58 3e-128 455
WERAM-Met-0068 AES71453 Medicago truncatula 57 8e-128 454
WERAM-Prp-0060 EMJ10303 Prunus persica 57 1e-125 447
WERAM-Sot-0054 PGSC0003DMT400046818 Solanum tuberosum 54 2e-123 439
WERAM-Amt-0082 ERN02510 Amborella trichopoda 56 3e-123 439
WERAM-Php-0050 PP1S223_52V6.1 Physcomitrella patens 52 7e-122 434
WERAM-Brd-0077 BRADI3G22370.1 Brachypodium distachyon 53 2e-120 429
WERAM-Orr-0094 ORUFI08G12880.1 Oryza rufipogon 53 4e-120 428
WERAM-Ors-0081 OS08T0344100-01 Oryza sativa 52 8e-120 427
WERAM-Orp-0087 OPUNC08G10650.1 Oryza punctata 52 8e-120 427
WERAM-Orm-0085 OMERI08G09730.1 Oryza meridionalis 52 8e-120 427
WERAM-Ori-0098 BGIOSGA028498-PA Oryza indica 52 8e-120 427
WERAM-Orgl-0088 OGLUM08G12440.1 Oryza glumaepatula 52 8e-120 427
WERAM-Org-0090 ORGLA08G0103000.1 Oryza glaberrima 52 8e-120 427
WERAM-Sei-0051 Si013709m Setaria italica 52 1e-118 424
WERAM-Sob-0102 Sb07g018230.1 Sorghum bicolor 53 1e-118 424
WERAM-Zem-0077 GRMZM2G136067_P01 Zea mays 52 2e-118 423
WERAM-Tra-0274 Traes_6DS_08E9A4EDB.1 Triticum aestivum 52 3e-118 422
WERAM-Orbr-0098 OB08G20020.1 Oryza brachyantha 51 4e-118 422
WERAM-Hov-0020 MLOC_17056.1 Hordeum vulgare 52 5e-118 421
WERAM-Aet-0051 EMT16627 Aegilops tauschii 54 3e-114 409
WERAM-Orb-0066 OBART06G19560.1 Oryza barthii 52 2e-113 406
WERAM-Sem-0132 EFJ35052 Selaginella moellendorffii 52 1e-112 404
WERAM-Tag-0022 ENSTGUP00000001473.1 Taeniopygia guttata 51 4e-112 402
WERAM-Gaga-0034 ENSGALP00000005212.3 Gallus gallus 51 4e-112 402
WERAM-Loa-0056 ENSLAFP00000004079.2 Loxodonta africana 51 5e-112 401
WERAM-Ptv-0152 ENSPVAP00000012567.1 Pteropus vampyrus 50 1e-111 400
WERAM-Ran-0062 ENSRNOP00000012854.5 Rattus norvegicus 50 2e-111 400
WERAM-Mum-0093 ENSMUSP00000099657.4 Mus musculus 50 2e-111 399
WERAM-Ova-0221 ENSOARP00000022517.1 Ovis aries 50 2e-111 399
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 50 2e-111 399
WERAM-Ocp-0006 ENSOPRP00000000780.1 Ochotona princeps 50 2e-111 399
WERAM-Mup-0173 ENSMPUP00000015122.1 Mustela putorius furo 50 3e-111 399
WERAM-Orc-0030 ENSOCUP00000003186.2 Oryctolagus cuniculus 50 3e-111 399
WERAM-Hos-0092 ENSP00000362649.3 Homo sapiens 50 3e-111 399
WERAM-Gog-0132 ENSGGOP00000011454.2 Gorilla gorilla 50 3e-111 399
WERAM-Nol-0026 ENSNLEP00000003167.1 Nomascus leucogenys 50 4e-111 399
WERAM-Otg-0072 ENSOGAP00000005101.2 Otolemur garnettii 50 4e-111 398
WERAM-Cap-0092 ENSCPOP00000006985.2 Cavia porcellus 50 4e-111 398
WERAM-Cii-0014 ENSCINP00000005410.3 Ciona intestinalis 50 5e-111 398
WERAM-Anc-0033 ENSACAP00000004062.3 Anolis carolinensis 50 6e-111 398
WERAM-Drm-0018 FBpp0073173 Drosophila melanogaster 51 1e-110 397
WERAM-Myl-0152 ENSMLUP00000012593.2 Myotis lucifugus 50 7e-110 394
WERAM-Lep-0023 LPERR02G07360.1 Leersia perrieri 51 1e-109 394
WERAM-Poa-0013 ENSPPYP00000001838.2 Pongo abelii 49 1e-109 393
WERAM-Caf-0116 ENSCAFP00000015619.3 Canis familiaris 50 2e-109 393
WERAM-Dan-0175 ENSDNOP00000033349.1 Dasypus novemcinctus 50 2e-109 393
WERAM-Meg-0047 ENSMGAP00000004521.2 Meleagris gallopavo 51 3e-109 392
WERAM-Orni-0020 ONIVA02G09910.1 Oryza nivara 51 3e-109 392
WERAM-Pes-0020 ENSPSIP00000004435.1 Pelodiscus sinensis 50 1e-108 390
WERAM-Fia-0005 ENSFALP00000000658.1 Ficedula albicollis 52 1e-108 390
WERAM-Eqc-0125 ENSECAP00000014039.1 Equus caballus 51 1e-108 390
WERAM-Pat-0210 ENSPTRP00000060659.1 Pan troglodytes 50 1e-108 390
WERAM-Mua-0044 GSMUA_Achr2P06520_001 Musa acuminata 55 2e-108 390
WERAM-Chs-0011 ENSCSAP00000016960.1 Chlorocebus sabaeus 50 2e-108 390
WERAM-Aim-0087 ENSAMEP00000008076.1 Ailuropoda melanoleuca 50 3e-108 389
WERAM-Anp-0136 ENSAPLP00000014652.1 Anas platyrhynchos 52 4e-108 389
WERAM-Gaa-0093 ENSGACP00000012045.1 Gasterosteus aculeatus 51 1e-107 387
WERAM-Fec-0127 ENSFCAP00000011581.3 Felis catus 51 1e-107 387
WERAM-Tut-0167 ENSTTRP00000014262.1 Tursiops truncatus 49 1e-107 387
WERAM-Sus-0201 ENSSSCP00000023024.1 Sus scrofa 50 3e-107 386
WERAM-Orn-0087 ENSONIP00000009730.1 Oreochromis niloticus 51 3e-107 386
WERAM-Xim-0002 ENSXMAP00000000390.1 Xiphophorus maculatus 50 3e-107 385
WERAM-Tar-0085 ENSTRUP00000016627.1 Takifugu rubripes 50 4e-107 385
WERAM-Orla-0197 ENSORLP00000022529.1 Oryzias latipes 50 4e-107 385
WERAM-Pof-0067 ENSPFOP00000005770.2 Poecilia formosa 50 6e-107 384
WERAM-Ten-0109 ENSTNIP00000012136.1 Tetraodon nigroviridis 50 6e-107 384
WERAM-Xet-0037 ENSXETP00000011480.3 Xenopus tropicalis 51 1e-106 384
WERAM-Gam-0033 ENSGMOP00000003469.1 Gadus morhua 50 1e-106 383
WERAM-Asm-0120 ENSAMXP00000012237.1 Astyanax mexicanus 49 2e-106 383
WERAM-Dar-0035 ENSDARP00000051798.4 Danio rerio 49 2e-106 383
WERAM-Leo-0014 ENSLOCP00000002993.1 Lepisosteus oculatus 51 3e-106 382
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 50 3e-106 382
WERAM-Mod-0165 ENSMODP00000022264.3 Monodelphis domestica 50 5e-106 382
WERAM-Paa-0030 ENSPANP00000015145.1 Papio anubis 50 5e-106 381
WERAM-Ict-0111 ENSSTOP00000011457.2 Ictidomys tridecemlineatus 50 5e-106 381
WERAM-Osl-0002 ABO94711 Ostreococcus lucimarinus 49 2e-105 379
WERAM-Cae-0007 R06C1.1.2 Caenorhabditis elegans 50 4e-105 379
WERAM-Asn-0024 CADANIAP00005952 Aspergillus nidulans 46 1e-104 377
WERAM-Ere-0068 ENSEEUP00000005465.1 Erinaceus europaeus 51 5e-104 375
WERAM-Sah-0134 ENSSHAP00000014467.1 Sarcophilus harrisii 51 5e-104 375
WERAM-Scs-0023 EDO03342 Sclerotinia sclerotiorum 46 8e-104 374
WERAM-Coi-0024 EAS33504 Coccidioides immitis 47 9e-104 374
WERAM-Caj-0052 ENSCJAP00000008409.2 Callithrix jacchus 52 3e-103 372
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 47 3e-103 372
WERAM-Ved-0020 EGY15146 Verticillium dahliae 46 3e-103 372
WERAM-Asni-0020 CADANGAP00005938 Aspergillus niger 46 3e-103 372
WERAM-Ora-0034 ENSOANP00000005760.2 Ornithorhynchus anatinus 52 4e-103 372
WERAM-Asfu-0015 CADAFUAP00003503 Aspergillus fumigatus 47 9e-103 371
WERAM-Asc-0037 CADACLAP00008612 Aspergillus clavatus 46 2e-102 369
WERAM-Mam-0083 ENSMMUP00000013015.2 Macaca mulatta 52 7e-102 368
WERAM-Prc-0059 ENSPCAP00000005589.1 Procavia capensis 48 2e-101 366
WERAM-Tas-0085 ENSTSYP00000008588.1 Tarsius syrichta 50 4e-101 365
WERAM-Kll-0018 CAG99124 Kluyveromyces lactis 47 6e-101 365
WERAM-Cag-0003 CAG57932 Candida glabrata 46 1e-100 363
WERAM-Spr-0005 CBQ70764 Sporisorium reilianum 47 4e-100 362
WERAM-Asg-0034 AAS54885 Ashbya gossypii 46 2e-99 359
WERAM-Gag-0026 GGTG_08607T0 Gaeumannomyces graminis 45 3e-99 359
WERAM-Trr-0017 EGR48353 Trichoderma reesei 45 3e-99 359
Created Date 25-Jun-2016