| Tag |
Content |
| WERAM ID |
WERAM-Bro-0151 |
| Ensembl Protein ID |
Bo8g076790.1 |
| Gene Name |
|
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
1.30e-115 |
387.8 |
17 |
327 |
|
| Organism |
Brassica oleracea |
| Domain Profile |
HDAC Class-I
class-1.txt 2 kvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenae......els.kelkkfnvge. 90
+v+y+y++ +g++ + ++++ th+L+ +y+l+++++i++p+ a+ +++++fhs eyi++l + +pe + +++ ++l+ f+++e
Bo8g076790.1 17 RVTYYYEPY-----IGDGSQRVSQQITTTHNLIRSYNLHNDMDIIRPSLAKDSDFVRFHSPEYITCLATLTPEYVDmankseNVAeTSLELFDLDEw 108
566666664.....688999999************************************************99887555544222357889***999 PP
class-1.txt 91 dcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvmt 187
d+P f gl +yc+l++G+s+ aa+kLn++eadi+inw+GG+h ak++ea Gf yvnD+vl+ilellk +krvlyidi hGD v+eafy+tdrvmt
Bo8g076790.1 109 DTPFFPGLIDYCRLYAGGSICAAAKLNRREADITINWSGGMHRAKRDEARGFGYVNDVVLGILELLKVFKRVLYIDIGYYHGDAVQEAFYKTDRVMT 205
************************************************************************************************* PP
class-1.txt 188 vsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksf 284
vsfh + Gd++d g+ekg yy++n Plk+g++D s+ +++ +vi+k +e+++Pea+vlqcG DslagD lg+fnl+ikgha c+++++sf
Bo8g076790.1 206 VSFHESV---VQSRGDITDNGVEKGEYYSLNAPLKNGLNDASFVNLLVPVIHKAMEVYQPEAIVLQCGPDSLAGDALGKFNLTIKGHAACLQYIRSF 299
****755...589************************************************************************************ PP
class-1.txt 285 nlpllvlGGGGYtlrnvaRcwtyetavv 312
n+pl++lGG G+tl nvaRcw+yetav
Bo8g076790.1 300 NVPLMLLGGQGHTLGNVARCWCYETAVS 327
*************************996 PP
|
Protein Sequence
(Fasta) | MENAASLASG TDGKKRRVTY YYEPYIGDGS QRVSQQITTT HNLIRSYNLH NDMDIIRPSL 60
AKDSDFVRFH SPEYITCLAT LTPEYVDMAN KSENVAETSL ELFDLDEWDT PFFPGLIDYC 120
RLYAGGSICA AAKLNRREAD ITINWSGGMH RAKRDEARGF GYVNDVVLGI LELLKVFKRV 180
LYIDIGYYHG DAVQEAFYKT DRVMTVSFHE SVVQSRGDIT DNGVEKGEYY SLNAPLKNGL 240
NDASFVNLLV PVIHKAMEVY QPEAIVLQCG PDSLAGDALG KFNLTIKGHA ACLQYIRSFN 300
VPLMLLGGQG HTLGNVARCW CYETAVSVGK EIDDDLDTNV SDACFAPGYQ LHIEPNRMKN 360
LNTDGYIAKI KKTLLNQLSQ VIHAPSVQFQ DTPPISQVTE AAEEDMETR 409Protein Fasta Sequence
>Bo8g076790.1|Class-I|Brassica oleracea
MENAASLASGTDGKKRRVTYYYEPYIGDGSQRVSQQITTTHNLIRSYNLHNDMDIIRPSLAKDSDFVRFHSPEYITCLATLTPEYVDMANKSENVAETSLELFDLDEWDTPFFPGLIDYCRLYAGGSICAAAKLNRREADITINWSGGMHRAKRDEARGFGYVNDVVLGILELLKVFKRVLYIDIGYYHGDAVQEAFYKTDRVMTVSFHESVVQSRGDITDNGVEKGEYYSLNAPLKNGLNDASFVNLLVPVIHKAMEVYQPEAIVLQCGPDSLAGDALGKFNLTIKGHAACLQYIRSFNVPLMLLGGQGHTLGNVARCWCYETAVSVGKEIDDDLDTNVSDACFAPGYQLHIEPNRMKNLNTDGYIAKIKKTLLNQLSQVIHAPSVQFQDTPPISQVTEAAEEDMETR |
Nucleotide Sequence
(Fasta) | ATGGAGAATG CGGCGAGCTT GGCTTCAGGT ACCGACGGAA AGAAACGGCG CGTGACCTAC 60
TACTACGAGC CATACATCGG CGACGGCAGT CAACGGGTAT CCCAACAGAT CACTACTACT 120
CACAACCTCA TCCGCAGCTA TAACCTCCAC AACGACATGG ATATCATCCG CCCTAGCCTT 180
GCCAAAGATT CAGATTTCGT TCGGTTTCAC TCGCCGGAGT ACATAACATG CCTCGCTACT 240
CTCACGCCGG AGTATGTCGA CATGGCTAAT AAGTCAGAAA ACGTAGCCGA AACTTCCTTG 300
GAGCTCTTCG ACTTAGACGA GTGGGACACC CCTTTCTTCC CTGGCCTCAT CGATTATTGC 360
CGTCTCTACG CTGGTGGTTC TATTTGCGCC GCCGCCAAGC TGAACCGACG CGAAGCTGAT 420
ATCACCATCA ATTGGTCCGG CGGGATGCAC CGTGCCAAGA GAGATGAGGC TCGTGGCTTT 480
GGCTACGTCA ATGACGTTGT TCTTGGGATC CTCGAGTTGC TCAAAGTCTT CAAGCGAGTT 540
CTCTACATAG ATATTGGGTA TTACCATGGG GATGCAGTAC AAGAAGCGTT CTACAAAACT 600
GATAGAGTTA TGACTGTTTC TTTCCACGAG TCTGTGGTCC AAAGCAGAGG AGACATAACA 660
GACAACGGGG TAGAAAAGGG AGAATACTAT TCTCTAAATG CTCCACTAAA GAATGGTTTG 720
AACGATGCAA GTTTCGTCAA TTTATTGGTA CCTGTTATCC ACAAGGCTAT GGAGGTTTAT 780
CAGCCGGAAG CAATTGTTCT TCAGTGTGGG CCTGATTCAC TAGCTGGTGA CGCGTTGGGT 840
AAATTCAACT TGACTATCAA GGGTCACGCT GCATGTCTCC AGTACATAAG ATCATTTAAC 900
GTTCCTCTCA TGCTCTTGGG TGGTCAAGGT CACACTCTTG GAAATGTTGC ACGTTGCTGG 960
TGCTATGAGA CAGCAGTTTC GGTTGGAAAA GAAATTGACG ACGATCTCGA TACCAATGTG 1020
TCCGATGCGT GTTTTGCCCC AGGTTATCAA CTTCATATTG AGCCAAACCG CATGAAGAAT 1080
TTAAACACAG ACGGATATAT CGCAAAAATA AAGAAGACAT TACTAAACCA ACTTTCGCAA 1140
GTGATACACG CACCTAGTGT GCAGTTTCAA GACACTCCAC CAATCAGTCA AGTTACAGAA 1200
GCAGCGGAAG AGGACATGGA GACGAGATAA
1231Nucleotide Fasta Sequence
>Bo8g076790.1|Class-I|Brassica oleracea
ATGGAGAATGCGGCGAGCTTGGCTTCAGGTACCGACGGAAAGAAACGGCGCGTGACCTACTACTACGAGCCATACATCGGCGACGGCAGTCAACGGGTATCCCAACAGATCACTACTACTCACAACCTCATCCGCAGCTATAACCTCCACAACGACATGGATATCATCCGCCCTAGCCTTGCCAAAGATTCAGATTTCGTTCGGTTTCACTCGCCGGAGTACATAACATGCCTCGCTACTCTCACGCCGGAGTATGTCGACATGGCTAATAAGTCAGAAAACGTAGCCGAAACTTCCTTGGAGCTCTTCGACTTAGACGAGTGGGACACCCCTTTCTTCCCTGGCCTCATCGATTATTGCCGTCTCTACGCTGGTGGTTCTATTTGCGCCGCCGCCAAGCTGAACCGACGCGAAGCTGATATCACCATCAATTGGTCCGGCGGGATGCACCGTGCCAAGAGAGATGAGGCTCGTGGCTTTGGCTACGTCAATGACGTTGTTCTTGGGATCCTCGAGTTGCTCAAAGTCTTCAAGCGAGTTCTCTACATAGATATTGGGTATTACCATGGGGATGCAGTACAAGAAGCGTTCTACAAAACTGATAGAGTTATGACTGTTTCTTTCCACGAGTCTGTGGTCCAAAGCAGAGGAGACATAACAGACAACGGGGTAGAAAAGGGAGAATACTATTCTCTAAATGCTCCACTAAAGAATGGTTTGAACGATGCAAGTTTCGTCAATTTATTGGTACCTGTTATCCACAAGGCTATGGAGGTTTATCAGCCGGAAGCAATTGTTCTTCAGTGTGGGCCTGATTCACTAGCTGGTGACGCGTTGGGTAAATTCAACTTGACTATCAAGGGTCACGCTGCATGTCTCCAGTACATAAGATCATTTAACGTTCCTCTCATGCTCTTGGGTGGTCAAGGTCACACTCTTGGAAATGTTGCACGTTGCTGGTGCTATGAGACAGCAGTTTCGGTTGGAAAAGAAATTGACGACGATCTCGATACCAATGTGTCCGATGCGTGTTTTGCCCCAGGTTATCAACTTCATATTGAGCCAAACCGCATGAAGAATTTAAACACAGACGGATATATCGCAAAAATAAAGAAGACATTACTAAACCAACTTTCGCAAGTGATACACGCACCTAGTGTGCAGTTTCAAGACACTCCACCAATCAGTCAAGTTACAGAAGCAGCGGAAGAGGACATGGAGACGAGATAA
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
