Tag |
Content |
WERAM ID |
WERAM-Brr-0093 |
Ensembl Protein ID |
Bra018072.1-P |
Gene Name |
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Ensembl Information |
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Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-I |
5.00e-116 |
388.7 |
17 |
382 |
|
Organism |
Brassica rapa |
Domain Profile |
HDAC Class-I
class-1.txt 2 kvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenae......els.kelkkfnvge 90 +v+y+y++++ g++ + +++s th+L+ +y+l+++++iv+p+ a+ +++++fhs eyi +l + +pe + +++ ++l+ f+++e Bra018072.1-P 17 RVTYFYEPNI-----GDGSQRVSQQISTTHNLIRSYHLHNDMDIVRPSLAKDSDFVQFHSPEYIACLATLTPEYVDmankseSVAeTTLELFDLDE 107 7889999985.....67888999************************************************99887555544222357889***99 PP class-1.txt 91 .dcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrv 185 d+P f gl +yc+l++G+s+ aa+kLn++eadiainw+GG+h ak++ea Gf yvnD+vl+ilellk +krvlyidi hGD v+eafy+tdrv Bra018072.1-P 108 wDTPFFPGLIDYCRLYAGGSICAAAKLNRSEADIAINWSGGMHRAKRDEARGFGYVNDVVLGILELLKVFKRVLYIDIGYYHGDAVQEAFYKTDRV 203 9*********************************************************************************************** PP class-1.txt 186 mtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfv 281 mtvsfh Gd++d g+ekg yy++n Plk+g+dD s+ +++ +vi+k +e+++Pea+vlqcG DslagD lg+fnl+i+gh+ c+ ++ Bra018072.1-P 204 MTVSFHESV---VQCRGDITDNGVEKGEYYSLNAPLKNGLDDASFVNLLVPVIHKAMEVYQPEAIVLQCGPDSLAGDALGKFNLTIEGHGACLGYI 296 ******755...589********************************************************************************* PP class-1.txt 282 ksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313 +sfn+pl++lGG G+tl nvaRcw+yetav++ Bra018072.1-P 297 RSFNVPLMLLGGQGHTLGNVARCWCYETAVAV 328 *****************************986 PP class-1.txt 54 eellkfhseeyieflkkvepenaeels 80 + + + +++eyi +kk ++ ++++ Bra018072.1-P 356 NRMKNLNTDEYIAKIKKTLLNQLSQVI 382 567788888888888877766666554 PP
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Protein Sequence (Fasta) | MENAASLASG PDGKKRRVTY FYEPNIGDGS QRVSQQISTT HNLIRSYHLH NDMDIVRPSL 60 AKDSDFVQFH SPEYIACLAT LTPEYVDMAN KSESVAETTL ELFDLDEWDT PFFPGLIDYC 120 RLYAGGSICA AAKLNRSEAD IAINWSGGMH RAKRDEARGF GYVNDVVLGI LELLKVFKRV 180 LYIDIGYYHG DAVQEAFYKT DRVMTVSFHE SVVQCRGDIT DNGVEKGEYY SLNAPLKNGL 240 DDASFVNLLV PVIHKAMEVY QPEAIVLQCG PDSLAGDALG KFNLTIEGHG ACLGYIRSFN 300 VPLMLLGGQG HTLGNVARCW CYETAVAVGK VIDDDLDTNV SDACFAPGYQ LHIEPNRMKN 360 LNTDEYIAKI KKTLLNQLSQ VIHAPSVQFQ DTPPISQVTE ATVSTTHVDM DQNTRDITTD 420 FVALGNNVRM GRNGSVDLFH DV 442Protein Fasta Sequence
>Bra018072.1-P|Class-I|Brassica rapa MENAASLASGPDGKKRRVTYFYEPNIGDGSQRVSQQISTTHNLIRSYHLHNDMDIVRPSLAKDSDFVQFHSPEYIACLATLTPEYVDMANKSESVAETTLELFDLDEWDTPFFPGLIDYCRLYAGGSICAAAKLNRSEADIAINWSGGMHRAKRDEARGFGYVNDVVLGILELLKVFKRVLYIDIGYYHGDAVQEAFYKTDRVMTVSFHESVVQCRGDITDNGVEKGEYYSLNAPLKNGLDDASFVNLLVPVIHKAMEVYQPEAIVLQCGPDSLAGDALGKFNLTIEGHGACLGYIRSFNVPLMLLGGQGHTLGNVARCWCYETAVAVGKVIDDDLDTNVSDACFAPGYQLHIEPNRMKNLNTDEYIAKIKKTLLNQLSQVIHAPSVQFQDTPPISQVTEATVSTTHVDMDQNTRDITTDFVALGNNVRMGRNGSVDLFHDV
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Nucleotide Sequence (Fasta) | ATGGAGAATG CGGCGAGCTT GGCTTCGGGT CCCGACGGAA AGAAACGGCG CGTGACCTAC 60 TTCTACGAGC CAAACATCGG CGACGGCAGT CAACGGGTAT CCCAACAGAT CAGTACGACT 120 CACAACCTCA TCCGCAGCTA TCACCTCCAC AATGACATGG ATATCGTCCG CCCTAGCCTT 180 GCCAAAGATT CAGATTTCGT TCAGTTTCAC TCGCCGGAGT ACATAGCATG CCTCGCTACT 240 CTCACGCCGG AGTATGTCGA CATGGCTAAT AAGTCAGAAA GCGTAGCCGA AACTACCCTC 300 GAGCTCTTCG ACTTAGACGA GTGGGACACC CCTTTCTTCC CTGGCCTCAT CGATTATTGC 360 CGTCTCTACG CCGGTGGTTC TATTTGCGCC GCCGCGAAAC TGAACCGAAG CGAAGCTGAT 420 ATCGCCATCA ATTGGTCCGG CGGGATGCAC CGCGCCAAGA GAGATGAGGC TCGTGGCTTT 480 GGCTACGTCA ACGACGTTGT TCTTGGGATC CTCGAGTTGC TCAAAGTCTT CAAGCGAGTT 540 CTCTACATAG ATATTGGGTA TTACCATGGG GATGCAGTAC AAGAAGCGTT CTACAAAACT 600 GATAGAGTTA TGACTGTTTC TTTCCACGAG TCTGTGGTCC AATGCAGAGG AGACATAACA 660 GACAACGGGG TAGAAAAGGG AGAATACTAT TCTCTAAATG CTCCGCTGAA GAATGGTTTG 720 GACGATGCAA GTTTCGTCAA TTTATTGGTA CCTGTCATCC ACAAGGCTAT GGAGGTTTAT 780 CAGCCGGAAG CAATTGTTCT TCAGTGTGGG CCTGATTCAC TAGCTGGTGA CGCGTTGGGT 840 AAATTCAACT TGACTATCGA GGGTCATGGT GCTTGTCTCG GGTACATAAG ATCATTTAAT 900 GTTCCTCTCA TGCTCTTGGG TGGTCAAGGT CACACTCTTG GAAATGTTGC ACGTTGCTGG 960 TGCTATGAGA CAGCAGTTGC GGTTGGAAAA GTAATTGACG ACGATCTCGA TACCAATGTC 1020 TCCGATGCGT GTTTTGCCCC AGGTTATCAA CTTCATATTG AGCCGAACCG CATGAAGAAT 1080 TTAAACACAG ACGAATATAT TGCAAAAATA AAGAAGACAT TACTAAACCA ACTTTCGCAA 1140 GTGATACACG CACCTAGTGT GCAGTTTCAA GACACTCCAC CAATCAGTCA AGTTACAGAA 1200 GCAACTGTCT CGACTACTCA CGTCGACATG GACCAGAACA CAAGAGACAT CACCACTGAT 1260 TTCGTGGCAC TTGGTAACAA TGTCCGAATG GGAAGAAATG GAAGTGTCGA TCTATTTCAT 1320 GACGTGTGA
Nucleotide Fasta Sequence
>Bra018072.1-P|Class-I|Brassica rapa ATGGAGAATGCGGCGAGCTTGGCTTCGGGTCCCGACGGAAAGAAACGGCGCGTGACCTACTTCTACGAGCCAAACATCGGCGACGGCAGTCAACGGGTATCCCAACAGATCAGTACGACTCACAACCTCATCCGCAGCTATCACCTCCACAATGACATGGATATCGTCCGCCCTAGCCTTGCCAAAGATTCAGATTTCGTTCAGTTTCACTCGCCGGAGTACATAGCATGCCTCGCTACTCTCACGCCGGAGTATGTCGACATGGCTAATAAGTCAGAAAGCGTAGCCGAAACTACCCTCGAGCTCTTCGACTTAGACGAGTGGGACACCCCTTTCTTCCCTGGCCTCATCGATTATTGCCGTCTCTACGCCGGTGGTTCTATTTGCGCCGCCGCGAAACTGAACCGAAGCGAAGCTGATATCGCCATCAATTGGTCCGGCGGGATGCACCGCGCCAAGAGAGATGAGGCTCGTGGCTTTGGCTACGTCAACGACGTTGTTCTTGGGATCCTCGAGTTGCTCAAAGTCTTCAAGCGAGTTCTCTACATAGATATTGGGTATTACCATGGGGATGCAGTACAAGAAGCGTTCTACAAAACTGATAGAGTTATGACTGTTTCTTTCCACGAGTCTGTGGTCCAATGCAGAGGAGACATAACAGACAACGGGGTAGAAAAGGGAGAATACTATTCTCTAAATGCTCCGCTGAAGAATGGTTTGGACGATGCAAGTTTCGTCAATTTATTGGTACCTGTCATCCACAAGGCTATGGAGGTTTATCAGCCGGAAGCAATTGTTCTTCAGTGTGGGCCTGATTCACTAGCTGGTGACGCGTTGGGTAAATTCAACTTGACTATCGAGGGTCATGGTGCTTGTCTCGGGTACATAAGATCATTTAATGTTCCTCTCATGCTCTTGGGTGGTCAAGGTCACACTCTTGGAAATGTTGCACGTTGCTGGTGCTATGAGACAGCAGTTGCGGTTGGAAAAGTAATTGACGACGATCTCGATACCAATGTCTCCGATGCGTGTTTTGCCCCAGGTTATCAACTTCATATTGAGCCGAACCGCATGAAGAATTTAAACACAGACGAATATATTGCAAAAATAAAGAAGACATTACTAAACCAACTTTCGCAAGTGATACACGCACCTAGTGTGCAGTTTCAAGACACTCCACCAATCAGTCAAGTTACAGAAGCAACTGTCTCGACTACTCACGTCGACATGGACCAGAACACAAGAGACATCACCACTGATTTCGTGGCACTTGGTAACAATGTCCGAATGGGAAGAAATGGAAGTGTCGATCTATTTCATGACGTGTGA
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Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |