WERAM Information

Tag Content
WERAM ID WERAM-Arl-0142
Ensembl Protein ID scaffold_700814.1
Gene Name hda14
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
scaffold_700814.1 scaffold_700814.1 scaffold_700814.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 2.70e-96 323.3 68 386
HDAC Class-I 2.90e-28 100 93 354
Organism Arabidopsis lyrata
Domain Profile
  HDAC Class-II
        class-2.txt  13 hqaleenkekhpEkpeRiqailsrlqeaglle.....kleelka.rkatkeelqlvHseehvelletae.klekeelesltvdsdsiylesk 97 
                        ++al +nk++hpE+++R+ ai+++l++++l++     +++el++ ++at e++++vH++++v  le+a+ +++++ l  + + s+ +y++s+
  scaffold_700814.1  68 SAALGHNKKSHPECSARVPAIVNALEKNELTPkfrgsQVLELANfKTATIEDIANVHDKAYVFGLEKAMdEASDSGLI-FIEGSGPTYATST 158
                        4567789999**********************555555777777699*********************9667777766.899********** PP
        class-2.txt  98 sikaarlavGavlelvdkvlkgelkn.....gfavvRPPGHHaeestamGFClfnnvavaakllqqklkvkkilivDwDvHhGnGtqeifyk 184
                        +++ + +a+Ga + lvd+v++++ +      gfa++RPPGHHa ++ +mGFC+f nva+aa+++q ++ +k+++i+D+DvHhGnGt+++f +
  scaffold_700814.1 159 TFQDSLIAAGAGMALVDSVIAASRNSpdpptGFALIRPPGHHAVPKGPMGFCVFGNVAIAARHAQYTHGLKRVFIIDFDVHHGNGTNDAFSE 250
                        ********************99965588899************************************************************* PP
        class-2.txt 185 dpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaegdplgglsv 276
                        dp++++lS+H  ++gs +p  g+g+++++g+gkgeg+++N++++gg+ gd  + ++f+e+++p+a++FkPdl+lvsaG+Da+  dpl++l++
  scaffold_700814.1 251 DPDIFFLSTH--QDGS-YP--GTGKISDIGKGKGEGTTLNLPLPGGS-GDIAMGTVFEEIIVPCAQRFKPDLILVSAGYDAHVLDPLANLQF 336
                        **********..9***.78..8***********************99.******************************************** PP
        class-2.txt 277 takcyatltkqllkl....aggrvvlvlEGGynlkaiaeaveavvkaLlg 322
                        t+ +y +l++++++l    +ggr+v++lEGGynl++++++v+ +++aLlg
  scaffold_700814.1 337 TTGTYYSLARDIKQLakevCGGRCVFFLEGGYNLESLSSSVADSFRALLG 386
                        **************99999*****************************96 PP
  HDAC Class-I
        class-1.txt  29 ltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdg..lfeycqlitGasleaakkLnk 118
                        + +eL  ++  s+ le+ + k+a+ e+++++h ++y+  l+k   e +++         ++   P +     f+ + + +Ga ++ ++ ++ 
  scaffold_700814.1  93 EKNELTPKFRGSQVLELANFKTATIEDIANVHDKAYVFGLEKAMDEASDSGL-----IFIEGSGPTYATstTFQDSLIAAGAGMALVDSVIA 179
                        34667788888999999999*****************999988766655433.....45788888765511555567889998888887766 PP
        class-1.txt 119 kead.......iainwaGGlhhakkseasGfcyvnDivlailellk..khkrvlyididlhhGDgveeafyttdrvmtvsfhkygeeffPgt 201
                         +++        a+      hha  +   Gfc   ++ +a  + +    +krv  id+d+hhG+g ++af++   ++ +s h+ g   +Pgt
  scaffold_700814.1 180 ASRNspdpptgFALIRP-PGHHAVPKGPMGFCVFGNVAIAARHAQYthGLKRVFIIDFDVHHGNGTNDAFSEDPDIFFLSTHQDGS--YPGT 268
                        55541112211343333.3499*****************998766512679*******************************9998..9*** PP
        class-1.txt 202 GdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksfnlp 287
                        G++sd+g++kg   ++n+Pl  g  D  + ++f+++i +  ++f+P+ +++  G D+   D+l++ ++++ ++ +  + +k+   +
  scaffold_700814.1 269 GKISDIGKGKGEGTTLNLPLPGGSGDIAMGTVFEEIIVPCAQRFKPDLILVSAGYDAHVLDPLANLQFTTGTYYSLARDIKQLAKE 354
                        ********************************************************************998877766666665443 PP
Protein Sequence
(Fasta)		MALVVRPLFV PGSAGISGTR DICKKNQSRK YLLKPNGASV NCSFSTEKEP LLPSIQQLTD 60
ARLIYSVSAA LGHNKKSHPE CSARVPAIVN ALEKNELTPK FRGSQVLELA NFKTATIEDI 120
ANVHDKAYVF GLEKAMDEAS DSGLIFIEGS GPTYATSTTF QDSLIAAGAG MALVDSVIAA 180
SRNSPDPPTG FALIRPPGHH AVPKGPMGFC VFGNVAIAAR HAQYTHGLKR VFIIDFDVHH 240
GNGTNDAFSE DPDIFFLSTH QDGSYPGTGK ISDIGKGKGE GTTLNLPLPG GSGDIAMGTV 300
FEEIIVPCAQ RFKPDLILVS AGYDAHVLDP LANLQFTTGT YYSLARDIKQ LAKEVCGGRC 360
VFFLEGGYNL ESLSSSVADS FRALLGEESL ASEFDNPAYL YDEPMRKVRD AIDRAKSIHC 420
L 421
Nucleotide Sequence
(Fasta)		CTTGAGGGGA ACTCCTGTCC ATGGCGCTAG TTGTCCGACC ACTCTTTGTT CCTGGAAGTG 60
CTGGGATTTC TGGGACTAGA GACATATGCA AGAAAAATCA GTCGAGGAAG TATCTTTTGA 120
AACCCAATGG AGCTTCCGTT AATTGCTCAT TTAGTACAGA GAAGGAACCT CTCTTACCGT 180
CTATCCAGCA GTTAACCGAT GCTCGTCTCA TATATAGTGT ATCTGCAGCA TTGGGTCATA 240
ACAAGAAATC ACATCCAGAA TGCAGCGCAA GAGTTCCTGC CATTGTTAAT GCTCTTGAGA 300
AGAATGAGCT CACTCCTAAG TTCCGTGGCT CACAGGTTCT TGAACTCGCA AATTTCAAGA 360
CTGCAACTAT AGAAGACATT GCAAATGTTC ACGACAAGGC TTATGTCTTT GGCCTAGAGA 420
AGGCAATGGA TGAGGCTTCA GATTCGGGGC TAATATTCAT CGAAGGATCT GGACCAACAT 480
ATGCCACTTC AACGACATTC CAAGATTCAC TTATCGCAGC AGGAGCCGGA ATGGCTTTAG 540
TTGATTCAGT GATCGCAGCA TCCAGAAACA GCCCAGATCC ACCCACTGGT TTTGCATTGA 600
TTAGACCTCC TGGACACCAC GCCGTGCCAA AAGGTCCAAT GGGGTTCTGT GTTTTTGGTA 660
ATGTGGCAAT CGCAGCTCGT CACGCCCAAT ACACACATGG TCTGAAGCGC GTCTTCATAA 720
TTGACTTCGA TGTTCACCAC GGGAATGGCA CAAATGATGC ATTTTCTGAG GACCCTGATA 780
TATTCTTTTT GTCAACTCAT CAGGATGGAA GCTACCCTGG GACAGGGAAA ATCAGTGACA 840
TAGGTAAAGG AAAAGGTGAA GGTACCACTC TAAATTTACC TTTACCTGGA GGTTCTGGTG 900
ATATTGCAAT GGGAACTGTT TTTGAAGAAA TCATTGTTCC ATGTGCTCAA CGGTTTAAGC 960
CAGACCTTAT TCTTGTTTCT GCTGGGTATG ATGCTCATGT CCTGGATCCA CTAGCAAATC 1020
TACAATTCAC GACTGGAACA TACTACTCAT TGGCAAGAGA TATTAAACAG TTAGCGAAAG 1080
AAGTATGCGG AGGGCGGTGT GTGTTTTTCT TGGAAGGAGG ATACAATCTT GAATCGCTTT 1140
CATCATCTGT GGCAGACTCG TTTCGAGCAT TGCTCGGGGA AGAAAGCTTG GCATCAGAGT 1200
TTGATAACCC AGCTTACTTG TATGATGAAC CAATGCGAAA GGTGCGAGAT GCAATTGACA 1260
GAGCCAAAAG CATTCATTGC TTATAAGGAG GATTTGCTTG AGAGGT 1307
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Art-0110 AT4G33470.1 Arabidopsis thaliana 94 0.0 822
WERAM-Brr-0061 Bra011444.1-P Brassica rapa 88 0.0 749
WERAM-Bro-0004 Bo1g008110.1 Brassica oleracea 88 0.0 748
WERAM-Pot-0060 POPTR_0005s06520.1 Populus trichocarpa 75 6e-178 620
WERAM-Viv-0021 VIT_04s0044g01510.t01 Vitis vinifera 74 4e-174 608
WERAM-Met-0183 AET04758 Medicago truncatula 72 4e-172 601
WERAM-Glm-0050 GLYMA05G32600.1 Glycine max 72 4e-167 585
WERAM-Sob-0054 Sb03g038950.1 Sorghum bicolor 68 3e-164 575
WERAM-Mua-0145 GSMUA_AchrUn_randomP00520_001 Musa acuminata 71 1e-163 573
WERAM-Brd-0117 BRADI4G40960.1 Brachypodium distachyon 68 2e-162 569
WERAM-Prp-0071 EMJ12704 Prunus persica 77 6e-162 567
WERAM-Ors-0108 OS12T0182700-01 Oryza sativa 70 7e-162 567
WERAM-Orp-0110 OPUNC12G04860.1 Oryza punctata 70 8e-162 567
WERAM-Orb-0120 OBART12G04910.1 Oryza barthii 70 1e-161 566
WERAM-Org-0113 ORGLA12G0047100.1 Oryza glaberrima 70 3e-161 565
WERAM-Orni-0103 ONIVA09G16260.1 Oryza nivara 70 3e-161 565
WERAM-Ori-0128 BGIOSGA037104-PA Oryza indica 70 4e-161 565
WERAM-Orbr-0123 OB12G14780.1 Oryza brachyantha 66 4e-161 564
WERAM-Lep-0114 LPERR12G04530.1 Leersia perrieri 69 1e-160 563
WERAM-Sei-0036 Si010171m Setaria italica 68 1e-160 563
WERAM-Zem-0142 GRMZM2G456473_P01 Zea mays 71 2e-160 562
WERAM-Tra-0186 Traes_5AS_78CA97493.2 Triticum aestivum 68 1e-159 560
WERAM-Orr-0120 ORUFI12G05690.1 Oryza rufipogon 67 2e-158 556
WERAM-Orl-0008 KN538685.1_FGP052 Oryza longistaminata 67 6e-158 554
WERAM-Orgl-0115 OGLUM12G05720.1 Oryza glumaepatula 67 9e-158 553
WERAM-Php-0127 PP1S85_154V6.1 Physcomitrella patens 65 1e-157 553
WERAM-Orm-0105 OMERI12G03370.1 Oryza meridionalis 64 8e-156 547
WERAM-Amt-0065 ERN18144 Amborella trichopoda 68 3e-148 521
WERAM-Tru-0036 TRIUR3_18154-P1 Triticum urartu 64 4e-143 504
WERAM-Sem-0047 EFJ16002 Selaginella moellendorffii 62 1e-126 450
WERAM-Sol-0006 Solyc01g009110.2.1 Solanum lycopersicum 79 4e-124 442
WERAM-Thc-0007 EOX92582 Theobroma cacao 82 8e-121 431
WERAM-Osl-0036 ABP01312 Ostreococcus lucimarinus 53 2e-100 363
WERAM-Chr-0006 EDP01653 Chlamydomonas reinhardtii 52 1e-53 207
WERAM-Dar-0023 ENSDARP00000124246.1 Danio rerio 38 9e-50 195
WERAM-Caf-0004 ENSCAFP00000000979.4 Canis familiaris 35 2e-49 194
WERAM-Aim-0036 ENSAMEP00000002564.1 Ailuropoda melanoleuca 36 3e-49 193
WERAM-Tut-0141 ENSTTRP00000011664.1 Tursiops truncatus 38 8e-49 192
WERAM-Myl-0003 ENSMLUP00000000417.2 Myotis lucifugus 38 9e-49 191
WERAM-Eqc-0086 ENSECAP00000010704.1 Equus caballus 35 3e-48 189
WERAM-Bot-0106 ENSBTAP00000014602.4 Bos taurus 36 5e-48 189
WERAM-Mup-0023 ENSMPUP00000002307.1 Mustela putorius furo 36 6e-48 189
WERAM-Ere-0078 ENSEEUP00000006690.1 Erinaceus europaeus 34 9e-48 188
WERAM-Cap-0164 ENSCPOP00000013386.2 Cavia porcellus 36 2e-47 187
WERAM-Spr-0021 CBQ72644 Sporisorium reilianum 32 2e-47 187
WERAM-Mum-0213 ENSMUSP00000080832.5 Mus musculus 34 4e-47 186
WERAM-Gog-0159 ENSGGOP00000014095.2 Gorilla gorilla 35 8e-47 185
WERAM-Chs-0051 ENSCSAP00000001305.1 Chlorocebus sabaeus 36 9e-47 185
WERAM-Fec-0119 ENSFCAP00000011049.3 Felis catus 34 9e-47 185
WERAM-Hos-0058 ENSP00000216271.5 Homo sapiens 35 1e-46 184
WERAM-Pat-0122 ENSPTRP00000025053.4 Pan troglodytes 35 1e-46 184
WERAM-Sus-0012 ENSSSCP00000001039.2 Sus scrofa 36 1e-46 184
WERAM-Cae-0060 F41H10.6b Caenorhabditis elegans 37 1e-46 184
WERAM-Ict-0132 ENSSTOP00000013675.2 Ictidomys tridecemlineatus 34 2e-46 184
WERAM-Paa-0009 ENSPANP00000013655.1 Papio anubis 36 2e-46 183
WERAM-Nol-0005 ENSNLEP00000000692.2 Nomascus leucogenys 35 4e-46 182
WERAM-Otg-0149 ENSOGAP00000012689.2 Otolemur garnettii 38 1e-45 181
WERAM-Ten-0061 ENSTNIP00000000291.1 Tetraodon nigroviridis 33 1e-45 181
WERAM-Cag-0018 CAG60803 Candida glabrata 33 2e-45 180
WERAM-Xet-0073 ENSXETP00000023344.3 Xenopus tropicalis 33 3e-45 180
WERAM-Drm-0028 FBpp0290988 Drosophila melanogaster 35 3e-45 180
WERAM-Gaa-0079 ENSGACP00000010554.1 Gasterosteus aculeatus 35 3e-45 179
WERAM-Orn-0049 ENSONIP00000005635.1 Oreochromis niloticus 34 4e-45 179
WERAM-Sac-0037 YNL021W Saccharomyces cerevisiae 33 6e-45 179
WERAM-Tar-0145 ENSTRUP00000031264.1 Takifugu rubripes 33 6e-45 179
WERAM-Sah-0095 ENSSHAP00000011018.1 Sarcophilus harrisii 34 1e-44 178
WERAM-Mel-0037 EGG03660 Melampsora laricipopulina 34 1e-44 178
WERAM-Pof-0042 ENSPFOP00000003781.2 Poecilia formosa 33 1e-44 177
WERAM-Scj-0031 EEB08679 Schizosaccharomyces japonicus 37 1e-44 177
WERAM-Anc-0012 ENSACAP00000019114.1 Anolis carolinensis 35 2e-44 177
WERAM-Ora-0108 ENSOANP00000020481.2 Ornithorhynchus anatinus 34 2e-44 177
WERAM-Ran-0201 ENSRNOP00000063689.2 Rattus norvegicus 36 2e-44 177
WERAM-Mod-0081 ENSMODP00000012731.2 Monodelphis domestica 36 3e-44 176
WERAM-Ect-0100 ENSETEP00000011415.1 Echinops telfairi 39 3e-44 176
WERAM-Loa-0107 ENSLAFP00000009167.2 Loxodonta africana 34 5e-44 176
WERAM-Pug-0031 EFP89333 Puccinia graminis 32 7e-44 175
WERAM-Orc-0191 ENSOCUP00000020861.2 Oryctolagus cuniculus 34 9e-44 175
WERAM-Asn-0017 CADANIAP00004063 Aspergillus nidulans 34 1e-43 174
WERAM-Lac-0157 ENSLACP00000018610.1 Latimeria chalumnae 33 1e-43 174
WERAM-Xim-0154 ENSXMAP00000012744.1 Xiphophorus maculatus 36 1e-43 174
WERAM-Fia-0056 ENSFALP00000004005.1 Ficedula albicollis 34 1e-43 174
WERAM-Caa-0034 KGT64501 Candida albicans 33 2e-43 174
WERAM-Ova-0212 ENSOARP00000021243.1 Ovis aries 35 2e-43 174
WERAM-Leo-0130 ENSLOCP00000016135.1 Lepisosteus oculatus 33 2e-43 174
WERAM-Tag-0050 ENSTGUP00000003338.1 Taeniopygia guttata 34 3e-43 173
WERAM-Meg-0023 ENSMGAP00000001752.2 Meleagris gallopavo 34 3e-43 173
WERAM-Anp-0035 ENSAPLP00000004005.1 Anas platyrhynchos 34 3e-43 173
WERAM-Gaga-0049 ENSGALP00000033098.3 Gallus gallus 34 3e-43 173
WERAM-Mae-0029 ENSMEUP00000002095.1 Macropus eugenii 37 3e-43 173
WERAM-Pes-0174 ENSPSIP00000020522.1 Pelodiscus sinensis 34 4e-43 173
WERAM-Usm-0012 UM02102P0 Ustilago maydis 31 4e-43 173
WERAM-Prc-0036 ENSPCAP00000003334.1 Procavia capensis 34 4e-43 172
WERAM-Mao-0002 MGG_01076T0 Magnaporthe oryzae 35 4e-43 172
WERAM-Crn-0010 AAW42071 Cryptococcus neoformans 35 5e-43 172
WERAM-Asm-0162 ENSAMXP00000016088.1 Astyanax mexicanus 35 7e-43 172
WERAM-Gam-0051 ENSGMOP00000005244.1 Gadus morhua 35 9e-43 171
WERAM-Pem-0058 ENSPMAP00000006830.1 Petromyzon marinus 34 1e-42 171
WERAM-Asg-0010 AAS51704 Ashbya gossypii 33 1e-42 171
WERAM-Caj-0009 ENSCJAP00000001947.2 Callithrix jacchus 33 1e-42 171
WERAM-Poa-0162 ENSPPYP00000019901.2 Pongo abelii 33 1e-42 171
WERAM-Coi-0028 EAS30926 Coccidioides immitis 35 1e-42 171
WERAM-Mam-0095 ENSMMUP00000014626.2 Macaca mulatta 33 1e-42 171
WERAM-Chg-0033 EAQ86725 Chaetomium globosum 33 1e-42 171
WERAM-Kop-0012 CAY68916 Komagataella pastoris 31 1e-42 171
WERAM-Map-0033 MAPG_10880T0 Magnaporthe poae 32 1e-42 171
WERAM-Kll-0020 CAG99415 Kluyveromyces lactis 34 1e-42 171
WERAM-Orla-0013 ENSORLP00000001341.1 Oryzias latipes 33 1e-42 171
WERAM-Tas-0117 ENSTSYP00000012457.1 Tarsius syrichta 33 2e-42 171
WERAM-Nec-0012 EFNCRP00000001681 Neurospora crassa 33 2e-42 170
WERAM-Lab-0047 EDQ99497 Laccaria bicolor 33 3e-42 170
WERAM-Gag-0014 GGTG_04308T0 Gaeumannomyces graminis 32 6e-42 169
WERAM-Dio-0075 ENSDORP00000007462.1 Dipodomys ordii 34 8e-42 168
WERAM-Yal-0023 CAG79971 Yarrowia lipolytica 34 9e-42 168
WERAM-Ocp-0057 ENSOPRP00000005096.1 Ochotona princeps 34 1e-41 167
Created Date 25-Jun-2016