WERAM Information

Tag Content
WERAM ID WERAM-Arl-0132
Ensembl Protein ID scaffold_500215.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
scaffold_500215.1 scaffold_500215.1 scaffold_500215.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 4.70e-61 207.7 8 144
Organism Arabidopsis lyrata
Domain Profile
  HDAC Class-I
        class-1.txt  86 fnvgedcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgvee 177
                          v+ d Pvf++lf+yc++++G++++aa+kLn++eadiainwaGG+  akk++as f y nD+vl+ilellk++krvly+di + hGDgvee
  scaffold_500215.1   8 SHVDLDGPVFHNLFDYCRAYAGGTISAAAKLNRQEADIAINWAGGMQNAKKDKASDFGYANDVVLGILELLKTFKRVLYVDIGFRHGDGVEE 99 
                        56899*************************************************************************************** PP
        class-1.txt 178 afyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidD 227
                        af+ tdrvmtv fhk g+     +Gd+sd g+++g+yy++n Plkdg+d 
  scaffold_500215.1 100 AFKDTDRVMTVYFHKIGD-----SGDISDFGEGRGQYYSLNAPLKDGLDQ 144
                        ******************.....9************************96 PP
Protein Sequence
(Fasta)		MSSSSNPSHV DLDGPVFHNL FDYCRAYAGG TISAAAKLNR QEADIAINWA GGMQNAKKDK 60
ASDFGYANDV VLGILELLKT FKRVLYVDIG FRHGDGVEEA FKDTDRVMTV YFHKIGDSGD 120
ISDFGEGRGQ YYSLNAPLKD GLDQGSKNP 149
Nucleotide Sequence
(Fasta)		AAACTTTCAC TCGACGGAGT ATGTCGAGTT CCTCAAATCC CTCACATGTG GACTTGGACG 60
GTCCTGTCTT CCATAACCTC TTCGATTATT GTCGTGCTTA CGCTGGTGGT ACTATTAGCG 120
CCGCCGCTAA ATTGAACCGT CAAGAAGCAG ATATTGCTAT CAATTGGGCC GGTGGGATGC 180
AAAATGCGAA GAAAGATAAG GCTTCTGACT TTGGCTATGC CAATGACGTT GTGCTTGGGA 240
TTCTCGAGTT GCTCAAAACT TTCAAGAGAG TTCTCTACGT AGATATTGGC TTTCGTCATG 300
GGGATGGAGT GGAAGAAGCA TTTAAGGACA CTGATAGAGT TATGACTGTT TATTTCCACA 360
AAATTGGGGA CTCCGGAGAC ATAAGTGACT TTGGGGAAGG AAGAGGACAA TATTATTCAC 420
TAAATGCACC ATTGAAGGAT GGTTTAGATC AAGGTTCAAA GAATCCCTAG GCGCTAGTTA 480
GGCGTTCGAA TG 493
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Art-0132 AT5G35600.1 Arabidopsis thaliana 85 6e-66 246
WERAM-Bro-0150 Bo8g076780.1 Brassica oleracea 72 2e-53 204
WERAM-Brr-0094 Bra018073.1-P Brassica rapa 65 2e-52 201
WERAM-Sot-0054 PGSC0003DMT400046818 Solanum tuberosum 65 3e-47 184
WERAM-Sol-0053 Solyc03g112410.1.1 Solanum lycopersicum 65 4e-47 183
WERAM-Glm-0036 GLYMA04G36090.1 Glycine max 66 3e-46 180
WERAM-Pot-0131 POPTR_0012s08570.1 Populus trichocarpa 59 8e-46 179
WERAM-Thc-0114 EOY33523 Theobroma cacao 63 8e-46 179
WERAM-Sei-0035 Si010167m Setaria italica 63 1e-45 179
WERAM-Orp-0042 OPUNC04G09700.1 Oryza punctata 63 1e-45 179
WERAM-Prp-0060 EMJ10303 Prunus persica 65 1e-45 178
WERAM-Viv-0108 VIT_17s0000g09070.t01 Vitis vinifera 64 1e-45 178
WERAM-Amt-0048 ERN13133 Amborella trichopoda 63 1e-45 178
WERAM-Orm-0045 OMERI04G10320.1 Oryza meridionalis 63 2e-45 178
WERAM-Zem-0071 GRMZM2G119703_P01 Zea mays 63 2e-45 177
WERAM-Sob-0086 Sb06g015420.1 Sorghum bicolor 63 3e-45 177
WERAM-Orl-0026 KN538765.1_FGP002 Oryza longistaminata 64 3e-45 177
WERAM-Orbr-0052 OB04G18820.1 Oryza brachyantha 64 3e-45 177
WERAM-Orni-0039 ONIVA04G09660.1 Oryza nivara 64 3e-45 177
WERAM-Ori-0051 BGIOSGA016344-PA Oryza indica 64 3e-45 177
WERAM-Orgl-0043 OGLUM04G11380.3 Oryza glumaepatula 64 3e-45 177
WERAM-Php-0035 PP1S180_68V6.1 Physcomitrella patens 64 3e-45 177
WERAM-Org-0044 ORGLA04G0087200.1 Oryza glaberrima 64 4e-45 177
WERAM-Orb-0042 OBART04G11700.1 Oryza barthii 64 4e-45 177
WERAM-Mua-0044 GSMUA_Achr2P06520_001 Musa acuminata 64 5e-45 176
WERAM-Sem-0137 EFJ33452 Selaginella moellendorffii 64 5e-45 176
WERAM-Tru-0028 TRIUR3_16261-P1 Triticum urartu 62 1e-44 175
WERAM-Fia-0005 ENSFALP00000000658.1 Ficedula albicollis 59 1e-44 175
WERAM-Tra-0038 Traes_2AL_1E7A00DC5.1 Triticum aestivum 62 1e-44 175
WERAM-Anp-0136 ENSAPLP00000014652.1 Anas platyrhynchos 59 1e-44 175
WERAM-Brd-0123 BRADI5G09190.1 Brachypodium distachyon 62 2e-44 175
WERAM-Orn-0090 ENSONIP00000010308.1 Oreochromis niloticus 59 2e-44 175
WERAM-Met-0084 KEH36404 Medicago truncatula 61 2e-44 175
WERAM-Tag-0022 ENSTGUP00000001473.1 Taeniopygia guttata 59 2e-44 175
WERAM-Meg-0047 ENSMGAP00000004521.2 Meleagris gallopavo 59 2e-44 175
WERAM-Loa-0056 ENSLAFP00000004079.2 Loxodonta africana 59 2e-44 174
WERAM-Gaga-0034 ENSGALP00000005212.3 Gallus gallus 59 2e-44 174
WERAM-Orla-0192 ENSORLP00000021872.1 Oryzias latipes 59 2e-44 174
WERAM-Aet-0101 EMT12816 Aegilops tauschii 62 2e-44 174
WERAM-Xim-0229 ENSXMAP00000019038.1 Xiphophorus maculatus 59 2e-44 174
WERAM-Pof-0034 ENSPFOP00000002952.2 Poecilia formosa 59 2e-44 174
WERAM-Leo-0176 ENSLOCP00000020984.1 Lepisosteus oculatus 60 2e-44 174
WERAM-Cae-0007 R06C1.1.2 Caenorhabditis elegans 60 2e-44 174
WERAM-Mam-0083 ENSMMUP00000013015.2 Macaca mulatta 58 3e-44 174
WERAM-Gaa-0093 ENSGACP00000012045.1 Gasterosteus aculeatus 59 4e-44 174
WERAM-Fec-0127 ENSFCAP00000011581.3 Felis catus 58 4e-44 174
WERAM-Tut-0018 ENSTTRP00000001520.1 Tursiops truncatus 58 4e-44 174
WERAM-Poa-0013 ENSPPYP00000001838.2 Pongo abelii 58 4e-44 174
WERAM-Chs-0011 ENSCSAP00000016960.1 Chlorocebus sabaeus 58 4e-44 173
WERAM-Pat-0210 ENSPTRP00000060659.1 Pan troglodytes 58 4e-44 173
WERAM-Gam-0211 ENSGMOP00000020496.1 Gadus morhua 59 4e-44 173
WERAM-Hos-0092 ENSP00000362649.3 Homo sapiens 58 4e-44 173
WERAM-Gog-0132 ENSGGOP00000011454.2 Gorilla gorilla 58 4e-44 173
WERAM-Ptv-0152 ENSPVAP00000012567.1 Pteropus vampyrus 58 4e-44 173
WERAM-Nol-0026 ENSNLEP00000003167.1 Nomascus leucogenys 58 5e-44 173
WERAM-Ova-0221 ENSOARP00000022517.1 Ovis aries 58 5e-44 173
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 58 5e-44 173
WERAM-Ocp-0006 ENSOPRP00000000780.1 Ochotona princeps 58 5e-44 173
WERAM-Caf-0116 ENSCAFP00000015619.3 Canis familiaris 58 5e-44 173
WERAM-Otg-0072 ENSOGAP00000005101.2 Otolemur garnettii 58 5e-44 173
WERAM-Mup-0173 ENSMPUP00000015122.1 Mustela putorius furo 58 5e-44 173
WERAM-Ten-0200 ENSTNIP00000020022.1 Tetraodon nigroviridis 59 5e-44 173
WERAM-Ran-0062 ENSRNOP00000012854.5 Rattus norvegicus 58 5e-44 173
WERAM-Mum-0093 ENSMUSP00000099657.4 Mus musculus 58 5e-44 173
WERAM-Cap-0092 ENSCPOP00000006985.2 Cavia porcellus 58 5e-44 173
WERAM-Tar-0062 ENSTRUP00000012875.1 Takifugu rubripes 59 5e-44 173
WERAM-Pes-0020 ENSPSIP00000004435.1 Pelodiscus sinensis 58 5e-44 173
WERAM-Orc-0030 ENSOCUP00000003186.2 Oryctolagus cuniculus 58 5e-44 173
WERAM-Eqc-0125 ENSECAP00000014039.1 Equus caballus 58 5e-44 173
WERAM-Ict-0103 ENSSTOP00000010833.2 Ictidomys tridecemlineatus 58 6e-44 173
WERAM-Dar-0035 ENSDARP00000051798.4 Danio rerio 59 6e-44 173
WERAM-Mae-0030 ENSMEUP00000002192.1 Macropus eugenii 58 6e-44 173
WERAM-Prc-0059 ENSPCAP00000005589.1 Procavia capensis 58 6e-44 173
WERAM-Sah-0109 ENSSHAP00000011760.1 Sarcophilus harrisii 58 6e-44 173
WERAM-Asm-0120 ENSAMXP00000012237.1 Astyanax mexicanus 59 7e-44 172
WERAM-Anc-0033 ENSACAP00000004062.3 Anolis carolinensis 58 1e-43 172
WERAM-Caj-0052 ENSCJAP00000008409.2 Callithrix jacchus 57 1e-43 172
WERAM-Aim-0151 ENSAMEP00000013919.1 Ailuropoda melanoleuca 57 1e-43 172
WERAM-Ora-0034 ENSOANP00000005760.2 Ornithorhynchus anatinus 57 1e-43 172
WERAM-Tas-0085 ENSTSYP00000008588.1 Tarsius syrichta 57 1e-43 172
WERAM-Vip-0012 ENSVPAP00000001394.1 Vicugna pacos 57 1e-43 172
WERAM-Ere-0068 ENSEEUP00000005465.1 Erinaceus europaeus 57 1e-43 172
WERAM-Sus-0028 ENSSSCP00000004781.2 Sus scrofa 57 1e-43 172
WERAM-Soa-0003 ENSSARP00000000316.1 Sorex araneus 57 2e-43 171
WERAM-Tub-0118 ENSTBEP00000013142.1 Tupaia belangeri 57 2e-43 171
WERAM-Myl-0035 ENSMLUP00000002835.2 Myotis lucifugus 57 2e-43 171
WERAM-Mod-0165 ENSMODP00000022264.3 Monodelphis domestica 57 2e-43 171
WERAM-Dan-0143 ENSDNOP00000031144.1 Dasypus novemcinctus 57 2e-43 171
WERAM-Paa-0030 ENSPANP00000015145.1 Papio anubis 57 2e-43 171
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 57 2e-43 171
WERAM-Drm-0018 FBpp0073173 Drosophila melanogaster 59 2e-43 171
WERAM-Orr-0042 ORUFI04G12890.1 Oryza rufipogon 63 3e-43 171
WERAM-Xet-0037 ENSXETP00000011480.3 Xenopus tropicalis 56 3e-43 171
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 59 4e-43 170
WERAM-Asn-0024 CADANIAP00005952 Aspergillus nidulans 59 6e-43 170
WERAM-Cii-0014 ENSCINP00000005410.3 Ciona intestinalis 59 7e-43 169
WERAM-Lep-0066 LPERR06G16070.1 Leersia perrieri 62 1e-42 168
WERAM-Ors-0081 OS08T0344100-01 Oryza sativa 56 1e-42 168
WERAM-Hov-0020 MLOC_17056.1 Hordeum vulgare 55 2e-42 168
WERAM-Asfu-0015 CADAFUAP00003503 Aspergillus fumigatus 59 2e-42 167
Created Date 25-Jun-2016