Tag |
Content |
WERAM ID |
WERAM-Sei-0083 |
Ensembl Protein ID |
Si022311m |
Gene Name |
SETIT_022311mg |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-I |
1.70e-36 |
127.4 |
48 |
335 |
|
Organism |
Setaria italica |
Domain Profile |
HDAC Class-I
class-1.txt 18 qkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdglfeycqlitGasleaakk 115 ++hp r++ + +++ + l+ + + a+a+ell+fhs eyie l + +++ a+++ + + + g + + l +G++l+a+k+ Si022311m 48 DQHPENADRVRNMVSILRRGPIAPFLSWHSGRPAHASELLSFHSSEYIEELVQANATGAKKFCE---------GTFLNPGSWGAALLAAGTTLSAVKH 136 67888888888888888888888889999999*******************9999999988883.........34456778889999*********** PP class-1.txt 116 Lnkkeadiainw.aGGlhhakkseasGfcyvnDivlai.lellkkhkrvlyididlhhGDgveeafyttdrvmtvsfhkygeef...fPgtGdlsdvg 208 + +++ ++a hha+ ++a G+c++n+ la+ l l ++v +did+h+G+g e fy d v+t+s+h + ++ P +G+++++g Si022311m 137 ILDGHGNLAYALvRPPGHHAQPNRADGYCFLNNAGLAVhLALDSGRSKVAVVDIDVHYGNGTAEGFYRMDNVLTISLHMRHGSWgpsHPQSGSVDEIG 234 *****999987624567********************945677799********************************8666662336789******* PP class-1.txt 209 aekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksf.....nlpllvlGGGGYtlrnv 301 ++kg y +n+Pl +g D ye +++++ + i+ f+P+ +v+ +G Ds a D+ g l+++g+ ++ ++++s n ++l++ GGY + Si022311m 235 EGKGLGYNLNIPLPNGSGDAGYEYAMNELVVPAIDKFQPQLLVFVVGQDSSAFDPNGRQCLTMEGYRKIGQIMRSMadqhsNGQILIVQEGGYHISYS 332 ******************************************************************999999998654345678**********9988 PP class-1.txt 302 aRc 304 a c Si022311m 333 AYC 335 877 PP
|
Protein Sequence (Fasta) | MASDSSPPAA EGPGDKLAVF WHEGMLAHDA GRGVFDSGRD PGFLDVLDQH PENADRVRNM 60 VSILRRGPIA PFLSWHSGRP AHASELLSFH SSEYIEELVQ ANATGAKKFC EGTFLNPGSW 120 GAALLAAGTT LSAVKHILDG HGNLAYALVR PPGHHAQPNR ADGYCFLNNA GLAVHLALDS 180 GRSKVAVVDI DVHYGNGTAE GFYRMDNVLT ISLHMRHGSW GPSHPQSGSV DEIGEGKGLG 240 YNLNIPLPNG SGDAGYEYAM NELVVPAIDK FQPQLLVFVV GQDSSAFDPN GRQCLTMEGY 300 RKIGQIMRSM ADQHSNGQIL IVQEGGYHIS YSAYCLHATL EGVLDLDAPL LDDPIAYYPE 360 DERYTMKVVD MIKNTWKESV PFLKDI 386Protein Fasta Sequence
>Si022311m|Class-I|Setaria italica MASDSSPPAAEGPGDKLAVFWHEGMLAHDAGRGVFDSGRDPGFLDVLDQHPENADRVRNMVSILRRGPIAPFLSWHSGRPAHASELLSFHSSEYIEELVQANATGAKKFCEGTFLNPGSWGAALLAAGTTLSAVKHILDGHGNLAYALVRPPGHHAQPNRADGYCFLNNAGLAVHLALDSGRSKVAVVDIDVHYGNGTAEGFYRMDNVLTISLHMRHGSWGPSHPQSGSVDEIGEGKGLGYNLNIPLPNGSGDAGYEYAMNELVVPAIDKFQPQLLVFVVGQDSSAFDPNGRQCLTMEGYRKIGQIMRSMADQHSNGQILIVQEGGYHISYSAYCLHATLEGVLDLDAPLLDDPIAYYPEDERYTMKVVDMIKNTWKESVPFLKDI
|
Nucleotide Sequence (Fasta) | GTTGAACAGA GGGAACCGCC GCCACCGGAA AAATCCGCCC GCGCCGAGCT GCCGATGGCC 60 TCCGACTCCT CCCCGCCGGC GGCGGAGGGT CCGGGGGATA AGCTGGCGGT GTTCTGGCAC 120 GAGGGCATGC TGGCCCACGA CGCCGGCCGC GGCGTCTTCG ACTCAGGTCG CGACCCGGGT 180 TTCCTGGACG TGCTCGACCA GCACCCGGAG AACGCCGACC GCGTCCGCAA CATGGTCTCC 240 ATCCTCCGCC GCGGGCCCAT CGCGCCCTTT CTCTCCTGGC ACTCCGGCCG CCCCGCCCAC 300 GCCTCCGAGC TCCTCTCCTT CCACTCCTCA GAATACATAG AGGAGCTCGT GCAGGCGAAC 360 GCCACCGGAG CCAAGAAGTT CTGCGAGGGC ACGTTTTTGA ACCCCGGTTC CTGGGGCGCT 420 GCGCTTCTGG CGGCCGGAAC CACGCTCTCC GCGGTGAAGC ATATACTAGA CGGGCACGGG 480 AACCTGGCCT ACGCGTTGGT CCGCCCCCCT GGCCATCACG CGCAGCCCAA CCGTGCTGAT 540 GGCTACTGCT TTCTGAACAA TGCTGGGCTT GCTGTGCACT TGGCTCTGGA TAGCGGGCGC 600 TCAAAGGTTG CAGTAGTCGA TATTGATGTT CACTATGGGA ATGGTACAGC AGAGGGCTTC 660 TATCGCATGG ACAATGTGCT TACGATTTCT CTTCACATGA GGCATGGGTC ATGGGGTCCA 720 TCGCATCCGC AGAGTGGCTC TGTCGATGAG ATTGGTGAAG GCAAGGGGCT TGGGTACAAT 780 CTCAATATAC CTTTGCCTAA TGGAAGTGGA GATGCTGGGT ATGAATATGC TATGAATGAG 840 TTGGTTGTTC CGGCAATTGA TAAGTTTCAG CCTCAACTTC TGGTTTTTGT AGTCGGTCAA 900 GATTCTAGTG CGTTTGATCC CAATGGAAGG CAATGCTTGA CCATGGAAGG CTATAGGAAA 960 ATTGGGCAAA TAATGCGGAG CATGGCTGAT CAACATAGCA ATGGGCAAAT ATTGATTGTC 1020 CAGGAAGGGG GTTACCACAT TAGTTACTCA GCATACTGTC TGCATGCAAC ACTGGAAGGT 1080 GTTTTGGATC TGGATGCCCC ACTGCTGGAT GACCCGATAG CTTACTATCC AGAGGATGAG 1140 AGATACACTA TGAAAGTTGT TGACATGATC AAGAATACCT GGAAAGAATC GGTCCCTTTC 1200 CTGAAGGACA TCTAGCAATC ACGTTTCCCT CAAGTTCAAA TCGTTTACTC TCTGCATCCA 1260 TGGTCTTCTA TTGGAACTAG AACAATATTG CACATTGCAT TGTACATTTA TAGGCCTTTT 1320 ATGAACCCCG ATCCCCTTGC ACTGTTGCAC AAGACAGATC AATGTTCTTG CACCATGGTT 1380 TGCCATGTCA AATACAGCAT TGTTTGTTCA GTTTCA
1417Nucleotide Fasta Sequence
>Si022311m|Class-I|Setaria italica GTTGAACAGAGGGAACCGCCGCCACCGGAAAAATCCGCCCGCGCCGAGCTGCCGATGGCCTCCGACTCCTCCCCGCCGGCGGCGGAGGGTCCGGGGGATAAGCTGGCGGTGTTCTGGCACGAGGGCATGCTGGCCCACGACGCCGGCCGCGGCGTCTTCGACTCAGGTCGCGACCCGGGTTTCCTGGACGTGCTCGACCAGCACCCGGAGAACGCCGACCGCGTCCGCAACATGGTCTCCATCCTCCGCCGCGGGCCCATCGCGCCCTTTCTCTCCTGGCACTCCGGCCGCCCCGCCCACGCCTCCGAGCTCCTCTCCTTCCACTCCTCAGAATACATAGAGGAGCTCGTGCAGGCGAACGCCACCGGAGCCAAGAAGTTCTGCGAGGGCACGTTTTTGAACCCCGGTTCCTGGGGCGCTGCGCTTCTGGCGGCCGGAACCACGCTCTCCGCGGTGAAGCATATACTAGACGGGCACGGGAACCTGGCCTACGCGTTGGTCCGCCCCCCTGGCCATCACGCGCAGCCCAACCGTGCTGATGGCTACTGCTTTCTGAACAATGCTGGGCTTGCTGTGCACTTGGCTCTGGATAGCGGGCGCTCAAAGGTTGCAGTAGTCGATATTGATGTTCACTATGGGAATGGTACAGCAGAGGGCTTCTATCGCATGGACAATGTGCTTACGATTTCTCTTCACATGAGGCATGGGTCATGGGGTCCATCGCATCCGCAGAGTGGCTCTGTCGATGAGATTGGTGAAGGCAAGGGGCTTGGGTACAATCTCAATATACCTTTGCCTAATGGAAGTGGAGATGCTGGGTATGAATATGCTATGAATGAGTTGGTTGTTCCGGCAATTGATAAGTTTCAGCCTCAACTTCTGGTTTTTGTAGTCGGTCAAGATTCTAGTGCGTTTGATCCCAATGGAAGGCAATGCTTGACCATGGAAGGCTATAGGAAAATTGGGCAAATAATGCGGAGCATGGCTGATCAACATAGCAATGGGCAAATATTGATTGTCCAGGAAGGGGGTTACCACATTAGTTACTCAGCATACTGTCTGCATGCAACACTGGAAGGTGTTTTGGATCTGGATGCCCCACTGCTGGATGACCCGATAGCTTACTATCCAGAGGATGAGAGATACACTATGAAAGTTGTTGACATGATCAAGAATACCTGGAAAGAATCGGTCCCTTTCCTGAAGGACATCTAGCAATCACGTTTCCCTCAAGTTCAAATCGTTTACTCTCTGCATCCATGGTCTTCTATTGGAACTAGAACAATATTGCACATTGCATTGTACATTTATAGGCCTTTTATGAACCCCGATCCCCTTGCACTGTTGCACAAGACAGATCAATGTTCTTGCACCATGGTTTGCCATGTCAAATACAGCATTGTTTGTTCAGTTTCA
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |