| Tag |
Content |
| WERAM ID |
WERAM-Php-0050 |
| Ensembl Protein ID |
PP1S223_52V6.1 |
| Gene Name |
HDA1505 PHYPADRAFT_145029 |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
1.80e-167 |
557.5 |
16 |
327 |
|
| Organism |
Physcomitrella patens |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvf 95
++v+y+yd+dvg+y+ygq+hpmkp+r++++h+L+++y+l+ ++e+++p a+ ++l++fh+++y++flk+v+pe++++ +++lk+fnvgedcPvf
PP1S223_52V6.1 16 RRVSYFYDPDVGNYYYGQGHPMKPHRIRMAHSLLVHYNLHTRMEVLRPYPARDRDLCRFHADDYVSFLKEVTPETQHDQMRQLKRFNVGEDCPVF 110
589******************************************************************************************** PP
class-1.txt 96 dglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvmtvsf 190
dgl+++cq+++G+s+ +a kLn++++diainwaGGlhhakk+easGfcyvnDivlailellk+h+rvlyidid+hhGDgveeafyttdrvmtvsf
PP1S223_52V6.1 111 DGLYNFCQTYAGGSVGGAVKLNHGHSDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSF 205
*********************************************************************************************** PP
class-1.txt 191 hkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksfn 285
hk+g+ +fPgtGd++d+g++kgkyy++nvPl+dgidDesy+++fk+++skv+e+f+P avvlqcGaDsl+gDrlg+fnls+kghaecv+f++sfn
PP1S223_52V6.1 206 HKFGD-YFPGTGDVRDIGHGKGKYYSLNVPLDDGIDDESYQSLFKPIMSKVMEVFQPGAVVLQCGADSLSGDRLGCFNLSVKGHAECVRFMRSFN 299
*****.***************************************************************************************** PP
class-1.txt 286 lpllvlGGGGYtlrnvaRcwtyetavvl 313
+pll++GGGGYt+rnvaRcw+yetav++
PP1S223_52V6.1 300 VPLLLVGGGGYTIRNVARCWCYETAVAV 327
*************************986 PP
|
Protein Sequence
(Fasta) | MEGGNSLVAG PEGRKRRVSY FYDPDVGNYY YGQGHPMKPH RIRMAHSLLV HYNLHTRMEV 60
LRPYPARDRD LCRFHADDYV SFLKEVTPET QHDQMRQLKR FNVGEDCPVF DGLYNFCQTY 120
AGGSVGGAVK LNHGHSDIAI NWAGGLHHAK KCEASGFCYV NDIVLAILEL LKYHQRVLYI 180
DIDIHHGDGV EEAFYTTDRV MTVSFHKFGD YFPGTGDVRD IGHGKGKYYS LNVPLDDGID 240
DESYQSLFKP IMSKVMEVFQ PGAVVLQCGA DSLSGDRLGC FNLSVKGHAE CVRFMRSFNV 300
PLLLVGGGGY TIRNVARCWC YETAVAVGEE LDDRLPHHEY YEYFGPDYSL HVAPSNMANQ 360
NSKKDIDNLR MKLLENLSKL QHVPSVPFSE RPPDTELPEN EDEDLELRDK GRTWDGELSD 420
SDSEDHDLRR RNQGVFASET AFPSYAINAM HVDESIYQAS LGLFVFSSLF PAYTFFTFLY 480
YSHEAYGFLL FERRRPPPLG STRGKSEEEI GEAMSSDDEI DMEDEARKGP EDTKDAAEEH 540
VEMDVDPAVE AGPEDETPSN IEMGGAPQAE QADTSAGAAP AVAVAPPTTT TNVDRESSVS 600
TAAPFLLHPS PSSTTAAVKP AASSSGRVTE RSTVAPAATN FNQSNSFGGA PSFTQRSYVP 660
PQPSAGSNMP WRQSQPGNHA KTSNQSNNSH SLPQAGVPLG IRAGPPSQAG GGASVPGSGS 720
GILSRSSGNP VLPPGRPGAP GPGSYSARPA GPTNRFASTI NPGANLGEPA QTDS 774Protein Fasta Sequence
>PP1S223_52V6.1|Class-I|Physcomitrella patens
MEGGNSLVAGPEGRKRRVSYFYDPDVGNYYYGQGHPMKPHRIRMAHSLLVHYNLHTRMEVLRPYPARDRDLCRFHADDYVSFLKEVTPETQHDQMRQLKRFNVGEDCPVFDGLYNFCQTYAGGSVGGAVKLNHGHSDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDIGHGKGKYYSLNVPLDDGIDDESYQSLFKPIMSKVMEVFQPGAVVLQCGADSLSGDRLGCFNLSVKGHAECVRFMRSFNVPLLLVGGGGYTIRNVARCWCYETAVAVGEELDDRLPHHEYYEYFGPDYSLHVAPSNMANQNSKKDIDNLRMKLLENLSKLQHVPSVPFSERPPDTELPENEDEDLELRDKGRTWDGELSDSDSEDHDLRRRNQGVFASETAFPSYAINAMHVDESIYQASLGLFVFSSLFPAYTFFTFLYYSHEAYGFLLFERRRPPPLGSTRGKSEEEIGEAMSSDDEIDMEDEARKGPEDTKDAAEEHVEMDVDPAVEAGPEDETPSNIEMGGAPQAEQADTSAGAAPAVAVAPPTTTTNVDRESSVSTAAPFLLHPSPSSTTAAVKPAASSSGRVTERSTVAPAATNFNQSNSFGGAPSFTQRSYVPPQPSAGSNMPWRQSQPGNHAKTSNQSNNSHSLPQAGVPLGIRAGPPSQAGGGASVPGSGSGILSRSSGNPVLPPGRPGAPGPGSYSARPAGPTNRFASTINPGANLGEPAQTDS |
Nucleotide Sequence
(Fasta) | ATTCACTTCG TTTCGAGCAT TTTCAGCGTC AGCCTGAGCC CCCGTTTAGC CGCACCCTGA 60
GTTTGTCGCT ACTTGCGGCT CTTTGGTTTT GCAGCTCCGG GGCTCTGCAT TACTTGGCTT 120
AGACACGTCC AGAGGTCGTC AGGTTGTGGT TTTTGCTGTT GGGTGCTCGT TGGGTGCGCG 180
AATAGAGACG CTTGTTCTAG CGCAACGACG TAGAACGAGA GCTCTAAGTA TGGCGGGGGC 240
CATGCTGGGA TTGGGTGGAG GTTAGCGTGG GTTGGTTCGG AGAGAAGTGG TGATGGAGGG 300
AGGGAATTCT CTCGTTGCGG GGCCTGAGGG GAGGAAGCGG CGTGTGTCGT ATTTTTACGA 360
TCCTGATGTG GGGAACTATT ACTATGGGCA GGGACATCCC ATGAAACCGC ATCGCATTCG 420
GATGGCGCAT TCGCTATTGG TGCACTACAA TCTGCACACG AGGATGGAGG TCCTGCGGCC 480
TTACCCAGCG CGTGATCGCG ACCTCTGTCG TTTTCACGCG GATGACTATG TGTCTTTCTT 540
GAAAGAAGTT ACTCCAGAGA CGCAGCATGA CCAGATGAGG CAACTCAAGC GCTTTAATGT 600
GGGTGAGGAT TGCCCTGTGT TTGATGGGCT GTACAATTTC TGCCAGACTT ACGCGGGGGG 660
CTCGGTCGGA GGCGCCGTCA AGCTCAATCA TGGCCACAGC GACATTGCCA TCAACTGGGC 720
GGGAGGCTTG CATCATGCGA AAAAGTGCGA GGCTTCTGGA TTTTGCTACG TTAATGATAT 780
CGTGCTTGCT ATCTTGGAGC TTCTCAAGTA CCATCAGCGA GTACTCTATA TTGATATCGA 840
CATACACCAC GGAGATGGTG TGGAGGAGGC GTTCTATACG ACTGATAGAG TGATGACTGT 900
TTCTTTTCAT AAATTTGGGG ACTACTTTCC AGGGACAGGA GATGTTCGAG ACATTGGTCA 960
TGGAAAGGGG AAGTATTATT CATTGAACGT TCCTTTGGAC GATGGGATTG ACGATGAGAG 1020
CTACCAATCG CTTTTTAAGC CCATCATGTC GAAGGTGATG GAAGTGTTTC AACCTGGCGC 1080
GGTGGTTCTA CAATGTGGGG CCGACTCTTT GTCGGGTGAT CGACTTGGCT GTTTCAACTT 1140
GTCTGTAAAA GGCCACGCAG AATGTGTTCG ATTTATGCGG TCTTTCAATG TGCCGTTGCT 1200
GCTTGTAGGC GGTGGAGGTT ATACAATACG CAATGTTGCT CGCTGTTGGT GCTATGAGAC 1260
AGCTGTGGCA GTAGGAGAAG AACTAGACGA CAGGTTGCCT CACCACGAAT ATTATGAATA 1320
CTTTGGGCCT GATTATTCAC TGCATGTCGC ACCGAGTAAC ATGGCAAATC AAAACTCAAA 1380
GAAAGATATT GATAATTTGA GGATGAAATT ATTGGAGAAC TTATCAAAAT TGCAGCATGT 1440
TCCAAGTGTC CCATTTTCCG AGAGGCCGCC AGATACCGAA CTTCCTGAAA ATGAGGATGA 1500
AGATTTGGAG CTTCGTGATA AAGGTCGTAC ATGGGATGGC GAATTATCGG ACTCCGACTC 1560
TGAGGATCAT GATCTAAGAC GACGCAATCA GGGTGTATTT GCTAGTGAGA CAGCATTTCC 1620
AAGTTATGCT ATAAATGCCA TGCATGTTGA TGAGAGCATT TATCAAGCGA GCTTAGGTTT 1680
GTTTGTTTTT TCTAGCCTTT TCCCTGCGTA TACTTTTTTT ACATTTTTGT ATTACTCCCA 1740
TGAAGCTTAT GGTTTTCTTC TCTTTGAACG CAGAAGACCC CCACCACTGG GTTCAACTAG 1800
GGGGAAATCT GAGGAAGAGA TTGGTGAAGC AATGTCCTCG GACGACGAGA TCGATATGGA 1860
AGATGAGGCT CGAAAAGGCC CCGAGGACAC CAAAGATGCT GCTGAGGAGC ACGTGGAAAT 1920
GGATGTGGAT CCAGCGGTTG AGGCTGGACC CGAGGATGAG ACACCATCCA ATATTGAAAT 1980
GGGTGGAGCA CCCCAGGCAG AGCAAGCAGA CACTTCTGCA GGAGCAGCGC CCGCAGTAGC 2040
AGTTGCACCA CCAACGACCA CAACCAATGT TGACAGAGAG AGCAGCGTAT CCACAGCTGC 2100
ACCTTTCCTC TTGCATCCCT CTCCTTCAAG CACAACTGCT GCCGTAAAGC CGGCTGCATC 2160
CTCTTCGGGT AGGGTGACAG AGCGATCAAC CGTCGCCCCT GCTGCAACAA ACTTCAACCA 2220
AAGTAATTCA TTTGGGGGCG CACCCAGTTT TACCCAAAGA TCATACGTCC CGCCCCAGCC 2280
AAGTGCGGGG TCGAATATGC CCTGGCGACA GTCTCAACCT GGAAACCATG CAAAGACTAG 2340
TAATCAATCC AACAATTCAC ATAGCCTTCC CCAAGCTGGT GTTCCACTGG GCATCAGGGC 2400
AGGCCCTCCG AGTCAGGCTG GAGGAGGAGC ATCTGTTCCG GGCTCTGGCT CTGGAATTCT 2460
GTCTCGTTCT AGTGGAAACC CAGTTCTACC TCCTGGTCGG CCAGGTGCTC CAGGCCCTGG 2520
TTCCTATTCT GCAAGACCTG CAGGACCAAC CAACCGGTTT GCTTCCACCA TCAATCCAGG 2580
AGCTAACTTG GGAGAGCCTG CACAAACTGA CAGCTGA
2618Nucleotide Fasta Sequence
>PP1S223_52V6.1|Class-I|Physcomitrella patens
ATTCACTTCGTTTCGAGCATTTTCAGCGTCAGCCTGAGCCCCCGTTTAGCCGCACCCTGAGTTTGTCGCTACTTGCGGCTCTTTGGTTTTGCAGCTCCGGGGCTCTGCATTACTTGGCTTAGACACGTCCAGAGGTCGTCAGGTTGTGGTTTTTGCTGTTGGGTGCTCGTTGGGTGCGCGAATAGAGACGCTTGTTCTAGCGCAACGACGTAGAACGAGAGCTCTAAGTATGGCGGGGGCCATGCTGGGATTGGGTGGAGGTTAGCGTGGGTTGGTTCGGAGAGAAGTGGTGATGGAGGGAGGGAATTCTCTCGTTGCGGGGCCTGAGGGGAGGAAGCGGCGTGTGTCGTATTTTTACGATCCTGATGTGGGGAACTATTACTATGGGCAGGGACATCCCATGAAACCGCATCGCATTCGGATGGCGCATTCGCTATTGGTGCACTACAATCTGCACACGAGGATGGAGGTCCTGCGGCCTTACCCAGCGCGTGATCGCGACCTCTGTCGTTTTCACGCGGATGACTATGTGTCTTTCTTGAAAGAAGTTACTCCAGAGACGCAGCATGACCAGATGAGGCAACTCAAGCGCTTTAATGTGGGTGAGGATTGCCCTGTGTTTGATGGGCTGTACAATTTCTGCCAGACTTACGCGGGGGGCTCGGTCGGAGGCGCCGTCAAGCTCAATCATGGCCACAGCGACATTGCCATCAACTGGGCGGGAGGCTTGCATCATGCGAAAAAGTGCGAGGCTTCTGGATTTTGCTACGTTAATGATATCGTGCTTGCTATCTTGGAGCTTCTCAAGTACCATCAGCGAGTACTCTATATTGATATCGACATACACCACGGAGATGGTGTGGAGGAGGCGTTCTATACGACTGATAGAGTGATGACTGTTTCTTTTCATAAATTTGGGGACTACTTTCCAGGGACAGGAGATGTTCGAGACATTGGTCATGGAAAGGGGAAGTATTATTCATTGAACGTTCCTTTGGACGATGGGATTGACGATGAGAGCTACCAATCGCTTTTTAAGCCCATCATGTCGAAGGTGATGGAAGTGTTTCAACCTGGCGCGGTGGTTCTACAATGTGGGGCCGACTCTTTGTCGGGTGATCGACTTGGCTGTTTCAACTTGTCTGTAAAAGGCCACGCAGAATGTGTTCGATTTATGCGGTCTTTCAATGTGCCGTTGCTGCTTGTAGGCGGTGGAGGTTATACAATACGCAATGTTGCTCGCTGTTGGTGCTATGAGACAGCTGTGGCAGTAGGAGAAGAACTAGACGACAGGTTGCCTCACCACGAATATTATGAATACTTTGGGCCTGATTATTCACTGCATGTCGCACCGAGTAACATGGCAAATCAAAACTCAAAGAAAGATATTGATAATTTGAGGATGAAATTATTGGAGAACTTATCAAAATTGCAGCATGTTCCAAGTGTCCCATTTTCCGAGAGGCCGCCAGATACCGAACTTCCTGAAAATGAGGATGAAGATTTGGAGCTTCGTGATAAAGGTCGTACATGGGATGGCGAATTATCGGACTCCGACTCTGAGGATCATGATCTAAGACGACGCAATCAGGGTGTATTTGCTAGTGAGACAGCATTTCCAAGTTATGCTATAAATGCCATGCATGTTGATGAGAGCATTTATCAAGCGAGCTTAGGTTTGTTTGTTTTTTCTAGCCTTTTCCCTGCGTATACTTTTTTTACATTTTTGTATTACTCCCATGAAGCTTATGGTTTTCTTCTCTTTGAACGCAGAAGACCCCCACCACTGGGTTCAACTAGGGGGAAATCTGAGGAAGAGATTGGTGAAGCAATGTCCTCGGACGACGAGATCGATATGGAAGATGAGGCTCGAAAAGGCCCCGAGGACACCAAAGATGCTGCTGAGGAGCACGTGGAAATGGATGTGGATCCAGCGGTTGAGGCTGGACCCGAGGATGAGACACCATCCAATATTGAAATGGGTGGAGCACCCCAGGCAGAGCAAGCAGACACTTCTGCAGGAGCAGCGCCCGCAGTAGCAGTTGCACCACCAACGACCACAACCAATGTTGACAGAGAGAGCAGCGTATCCACAGCTGCACCTTTCCTCTTGCATCCCTCTCCTTCAAGCACAACTGCTGCCGTAAAGCCGGCTGCATCCTCTTCGGGTAGGGTGACAGAGCGATCAACCGTCGCCCCTGCTGCAACAAACTTCAACCAAAGTAATTCATTTGGGGGCGCACCCAGTTTTACCCAAAGATCATACGTCCCGCCCCAGCCAAGTGCGGGGTCGAATATGCCCTGGCGACAGTCTCAACCTGGAAACCATGCAAAGACTAGTAATCAATCCAACAATTCACATAGCCTTCCCCAAGCTGGTGTTCCACTGGGCATCAGGGCAGGCCCTCCGAGTCAGGCTGGAGGAGGAGCATCTGTTCCGGGCTCTGGCTCTGGAATTCTGTCTCGTTCTAGTGGAAACCCAGTTCTACCTCCTGGTCGGCCAGGTGCTCCAGGCCCTGGTTCCTATTCTGCAAGACCTGCAGGACCAACCAACCGGTTTGCTTCCACCATCAATCCAGGAGCTAACTTGGGAGAGCCTGCACAAACTGACAGCTGA
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
