| Tag |
Content |
| WERAM ID |
WERAM-Orni-0065 |
| Ensembl Protein ID |
ONIVA06G23170.1 |
| Gene Name |
|
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
8.00e-231 |
766 |
22 |
482 |
|
| Organism |
Oryza nivara |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPv 94
++v+y+yd +vg+y+ygq+hpmkp+r+++th L+ +ygl +++++kp+ a+ ++l++fh+++y+ fl+ v+pe++ + +++l++fnvgedcPv
ONIVA06G23170.1 22 RRVCYFYDAEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLDQMQVLKPHPARDRDLCRFHADDYVAFLRAVTPETQLDQIRSLRRFNVGEDCPV 115
589******************************************************************************************* PP
class-1.txt 95 fdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhk 160
fdgl+ ycq+++Gas+ aa kLn+++ diainw+GGlhhakkseasGfcyvnDivlailellk h+
ONIVA06G23170.1 116 FDGLYAYCQTYAGASVGAAVKLNHGTHDIAINWSGGLHHAKKSEASGFCYVNDIVLAILELLKLHE 181
***************************************************************986 PP
class-1.txt 10 dvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdglfeycq 103
+vg+y+ygq+hpmkp+r+++th L+ +ygl +++++kp+ a+ ++l++fh+++y+ fl++v+pe++++ ++ lk+fnvgedcPvfdgl+++cq
ONIVA06G23170.1 181 EVGNYYYGQGHPMKPHRIRMTHALLAHYGLLDQMQVLKPHPARDRDLCRFHADDYVAFLRSVTPETQQDQIRALKRFNVGEDCPVFDGLYSFCQ 274
79******************************************************************************************** PP
class-1.txt 104 litGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvmtvsfhkygeef 197
+++G+s+ +a kLn++ diainwaGGlhhakk+easGfcyvnDivlailellk+h+rvly+did+hhGDgveeafyttdrvmtvsfhk+g+ +
ONIVA06G23170.1 275 TYAGGSVGGAVKLNHG-HDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKYHQRVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGD-Y 366
*************997.59*************************************************************************.* PP
class-1.txt 198 fPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksfnlpllvl 291
fPgtGd++d+g+ kgkyy++nvPl+dgidDesy+++fk+++ kv+e+f+P avvlqcGaDsl+gDrlg+fnlsi+ghaecv+f++sfn+pll+l
ONIVA06G23170.1 367 FPGTGDIRDIGHSKGKYYSLNVPLDDGIDDESYQSLFKPIMGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVRFMRSFNVPLLLL 460
********************************************************************************************** PP
class-1.txt 292 GGGGYtlrnvaRcwtyetavvl 313
GGGGYt+rnvaRcw+yet+v+l
ONIVA06G23170.1 461 GGGGYTIRNVARCWCYETGVAL 482
*******************986 PP
|
Protein Sequence
(Fasta) | MDASAGGGGN SLPTAGADGA KRRVCYFYDA EVGNYYYGQG HPMKPHRIRM THALLAHYGL 60
LDQMQVLKPH PARDRDLCRF HADDYVAFLR AVTPETQLDQ IRSLRRFNVG EDCPVFDGLY 120
AYCQTYAGAS VGAAVKLNHG THDIAINWSG GLHHAKKSEA SGFCYVNDIV LAILELLKLH 180
EVGNYYYGQG HPMKPHRIRM THALLAHYGL LDQMQVLKPH PARDRDLCRF HADDYVAFLR 240
SVTPETQQDQ IRALKRFNVG EDCPVFDGLY SFCQTYAGGS VGGAVKLNHG HDIAINWAGG 300
LHHAKKCEAS GFCYVNDIVL AILELLKYHQ RVLYVDIDIH HGDGVEEAFY TTDRVMTVSF 360
HKFGDYFPGT GDIRDIGHSK GKYYSLNVPL DDGIDDESYQ SLFKPIMGKV MEVFRPGAVV 420
LQCGADSLSG DRLGCFNLSI RGHAECVRFM RSFNVPLLLL GGGGYTIRNV ARCWCYETGV 480
ALGHELTDKM PPNEYFEYFG PDYTLHVAPS NMENKNTRQQ LDDIRSRLLD NLSKLRHAPS 540
VQFQERPPEA ELPEQDEDQE DPDERHHADS DVEMDDVKPL DDSGRRSSIQ NVRVKRESAE 600
TDAADQLLWL MCAQRCDGNR VAAEHTKGTE PVADGVGSSK QTVPTDASAM AIDEPGSLKV 660
EPDNSNKLQD QPSVHQKP 678Protein Fasta Sequence
>ONIVA06G23170.1|Class-I|Oryza nivara
MDASAGGGGNSLPTAGADGAKRRVCYFYDAEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLDQMQVLKPHPARDRDLCRFHADDYVAFLRAVTPETQLDQIRSLRRFNVGEDCPVFDGLYAYCQTYAGASVGAAVKLNHGTHDIAINWSGGLHHAKKSEASGFCYVNDIVLAILELLKLHEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLDQMQVLKPHPARDRDLCRFHADDYVAFLRSVTPETQQDQIRALKRFNVGEDCPVFDGLYSFCQTYAGGSVGGAVKLNHGHDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKYHQRVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGHSKGKYYSLNVPLDDGIDDESYQSLFKPIMGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVRFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGHELTDKMPPNEYFEYFGPDYTLHVAPSNMENKNTRQQLDDIRSRLLDNLSKLRHAPSVQFQERPPEAELPEQDEDQEDPDERHHADSDVEMDDVKPLDDSGRRSSIQNVRVKRESAETDAADQLLWLMCAQRCDGNRVAAEHTKGTEPVADGVGSSKQTVPTDASAMAIDEPGSLKVEPDNSNKLQDQPSVHQKP |
Nucleotide Sequence
(Fasta) | ATGGACGCCT CCGCCGGAGG CGGGGGGAAC TCGCTGCCGA CGGCGGGGGC CGACGGGGCC 60
AAGCGGCGGG TGTGCTACTT CTACGACGCG GAGGTGGGGA ACTACTACTA CGGGCAGGGG 120
CACCCGATGA AGCCCCACCG CATCCGGATG ACCCACGCGC TGCTCGCCCA CTACGGCCTC 180
CTCGACCAGA TGCAGGTGCT CAAGCCCCAC CCGGCGCGCG ACCGCGACCT CTGCCGCTTC 240
CACGCCGACG ACTACGTCGC CTTCCTCCGC GCCGTCACCC CGGAGACCCA GCTCGACCAG 300
ATCCGCTCCC TCCGCCGCTT CAACGTCGGC GAGGACTGCC CCGTCTTCGA CGGCCTCTAC 360
GCCTACTGCC AGACCTACGC GGGGGCCTCC GTCGGCGCCG CCGTCAAGCT CAACCACGGC 420
ACCCACGACA TCGCCATCAA CTGGTCCGGC GGGTTGCACC ACGCCAAGAA GTCCGAGGCC 480
TCCGGCTTCT GCTACGTCAA CGACATCGTC CTCGCCATCC TCGAGCTCCT CAAGCTCCAT 540
GAGGTGGGGA ACTACTACTA CGGGCAGGGG CACCCGATGA AGCCCCACCG CATCCGGATG 600
ACCCACGCGC TGCTCGCCCA CTACGGCCTC CTCGACCAGA TGCAGGTGCT CAAGCCCCAC 660
CCGGCGCGCG ACCGCGACCT CTGCCGCTTC CACGCCGACG ACTACGTCGC CTTCCTCCGC 720
TCCGTCACGC CGGAGACCCA GCAGGACCAG ATCCGGGCGC TCAAGCGCTT CAACGTCGGC 780
GAGGACTGCC CCGTCTTCGA CGGCCTCTAC AGCTTCTGCC AGACCTACGC CGGGGGATCC 840
GTCGGCGGCG CCGTCAAGCT CAACCACGGC CACGACATCG CCATCAACTG GGCCGGCGGC 900
CTCCACCACG CCAAGAAGTG CGAGGCCTCC GGCTTCTGCT ACGTCAACGA CATCGTCCTC 960
GCCATCCTCG AGCTCCTCAA ATACCACCAG CGTGTTCTCT ATGTGGACAT CGATATCCAC 1020
CATGGGGATG GTGTGGAGGA GGCGTTTTAC ACGACGGACA GGGTGATGAC GGTCTCGTTC 1080
CACAAGTTTG GGGATTATTT CCCGGGGACC GGGGACATTC GCGATATTGG GCACTCAAAG 1140
GGGAAGTATT ACTCTCTGAA TGTCCCGTTG GACGACGGTA TTGACGATGA GAGCTACCAG 1200
TCGTTGTTCA AGCCGATCAT GGGGAAGGTG ATGGAGGTTT TTCGCCCTGG CGCGGTGGTG 1260
CTCCAGTGTG GTGCGGACTC TCTGTCAGGT GATCGGTTGG GTTGCTTCAA CCTATCGATC 1320
AGGGGCCACG CGGAATGTGT GAGATTCATG AGGTCCTTCA ACGTCCCGCT GTTGCTGCTT 1380
GGTGGTGGTG GGTATACCAT AAGAAATGTT GCACGGTGTT GGTGCTATGA GACAGGAGTT 1440
GCACTTGGTC ATGAGCTCAC CGACAAGATG CCTCCAAATG AGTATTTTGA GTACTTTGGT 1500
CCAGATTATA CACTTCATGT TGCACCAAGT AACATGGAGA ACAAAAACAC ACGCCAGCAA 1560
TTGGATGATA TAAGATCAAG ACTTCTTGAT AATCTTTCAA AACTTCGACA TGCTCCTAGC 1620
GTCCAATTTC AAGAGCGACC CCCTGAGGCT GAGCTACCTG AGCAAGATGA AGACCAAGAG 1680
GATCCTGATG AAAGGCATCA TGCTGATTCT GATGTGGAAA TGGATGATGT CAAACCTTTG 1740
GATGACTCAG GAAGGAGGAG CAGTATTCAG AATGTGAGAG TTAAGAGAGA GTCTGCTGAA 1800
ACAGATGCCG CAGATCAGTT GTTATGGTTA ATGTGTGCTC AAAGGTGTGA TGGTAATAGG 1860
GTCGCTGCAG AGCACACCAA GGGCACAGAA CCTGTGGCTG ATGGAGTTGG TTCCTCGAAA 1920
CAAACTGTTC CTACCGATGC AAGTGCAATG GCCATAGACG AACCAGGCTC CCTGAAAGTC 1980
GAGCCAGATA ACTCGAACAA ATTGCAAGAT CAACCATCGG TGCACCAGAA GCCATAA
2038Nucleotide Fasta Sequence
>ONIVA06G23170.1|Class-I|Oryza nivara
ATGGACGCCTCCGCCGGAGGCGGGGGGAACTCGCTGCCGACGGCGGGGGCCGACGGGGCCAAGCGGCGGGTGTGCTACTTCTACGACGCGGAGGTGGGGAACTACTACTACGGGCAGGGGCACCCGATGAAGCCCCACCGCATCCGGATGACCCACGCGCTGCTCGCCCACTACGGCCTCCTCGACCAGATGCAGGTGCTCAAGCCCCACCCGGCGCGCGACCGCGACCTCTGCCGCTTCCACGCCGACGACTACGTCGCCTTCCTCCGCGCCGTCACCCCGGAGACCCAGCTCGACCAGATCCGCTCCCTCCGCCGCTTCAACGTCGGCGAGGACTGCCCCGTCTTCGACGGCCTCTACGCCTACTGCCAGACCTACGCGGGGGCCTCCGTCGGCGCCGCCGTCAAGCTCAACCACGGCACCCACGACATCGCCATCAACTGGTCCGGCGGGTTGCACCACGCCAAGAAGTCCGAGGCCTCCGGCTTCTGCTACGTCAACGACATCGTCCTCGCCATCCTCGAGCTCCTCAAGCTCCATGAGGTGGGGAACTACTACTACGGGCAGGGGCACCCGATGAAGCCCCACCGCATCCGGATGACCCACGCGCTGCTCGCCCACTACGGCCTCCTCGACCAGATGCAGGTGCTCAAGCCCCACCCGGCGCGCGACCGCGACCTCTGCCGCTTCCACGCCGACGACTACGTCGCCTTCCTCCGCTCCGTCACGCCGGAGACCCAGCAGGACCAGATCCGGGCGCTCAAGCGCTTCAACGTCGGCGAGGACTGCCCCGTCTTCGACGGCCTCTACAGCTTCTGCCAGACCTACGCCGGGGGATCCGTCGGCGGCGCCGTCAAGCTCAACCACGGCCACGACATCGCCATCAACTGGGCCGGCGGCCTCCACCACGCCAAGAAGTGCGAGGCCTCCGGCTTCTGCTACGTCAACGACATCGTCCTCGCCATCCTCGAGCTCCTCAAATACCACCAGCGTGTTCTCTATGTGGACATCGATATCCACCATGGGGATGGTGTGGAGGAGGCGTTTTACACGACGGACAGGGTGATGACGGTCTCGTTCCACAAGTTTGGGGATTATTTCCCGGGGACCGGGGACATTCGCGATATTGGGCACTCAAAGGGGAAGTATTACTCTCTGAATGTCCCGTTGGACGACGGTATTGACGATGAGAGCTACCAGTCGTTGTTCAAGCCGATCATGGGGAAGGTGATGGAGGTTTTTCGCCCTGGCGCGGTGGTGCTCCAGTGTGGTGCGGACTCTCTGTCAGGTGATCGGTTGGGTTGCTTCAACCTATCGATCAGGGGCCACGCGGAATGTGTGAGATTCATGAGGTCCTTCAACGTCCCGCTGTTGCTGCTTGGTGGTGGTGGGTATACCATAAGAAATGTTGCACGGTGTTGGTGCTATGAGACAGGAGTTGCACTTGGTCATGAGCTCACCGACAAGATGCCTCCAAATGAGTATTTTGAGTACTTTGGTCCAGATTATACACTTCATGTTGCACCAAGTAACATGGAGAACAAAAACACACGCCAGCAATTGGATGATATAAGATCAAGACTTCTTGATAATCTTTCAAAACTTCGACATGCTCCTAGCGTCCAATTTCAAGAGCGACCCCCTGAGGCTGAGCTACCTGAGCAAGATGAAGACCAAGAGGATCCTGATGAAAGGCATCATGCTGATTCTGATGTGGAAATGGATGATGTCAAACCTTTGGATGACTCAGGAAGGAGGAGCAGTATTCAGAATGTGAGAGTTAAGAGAGAGTCTGCTGAAACAGATGCCGCAGATCAGTTGTTATGGTTAATGTGTGCTCAAAGGTGTGATGGTAATAGGGTCGCTGCAGAGCACACCAAGGGCACAGAACCTGTGGCTGATGGAGTTGGTTCCTCGAAACAAACTGTTCCTACCGATGCAAGTGCAATGGCCATAGACGAACCAGGCTCCCTGAAAGTCGAGCCAGATAACTCGAACAAATTGCAAGATCAACCATCGGTGCACCAGAAGCCATAA
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
