| Tag |
Content |
| WERAM ID |
WERAM-Orni-0005 |
| Ensembl Protein ID |
ONIVA01G23540.1 |
| Gene Name |
|
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
2.70e-123 |
412.7 |
22 |
348 |
|
| Organism |
Oryza nivara |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenae......elskelkkfnv 88
++v+y+yd+ ++++ yg++h+m+p+r++++h+Lv +yg+ +++++++ a+a+el+ fh e y+ +l+ +p+ ++++ ++v
ONIVA01G23540.1 22 RRVCYYYDPGISTVDYGEGHVMVPHRVTMAHNLVAAYGMLGDMHRLRTAPATAAELADFHDEGYLALLQDLTPDGCGgddgvgDMARARGIYAV 115
589**********************************************************************998777778767777777888 PP
class-1.txt 89 ge.......dcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgv 175
+ d Pvfd l++yc ++G+sl+aa+ L +++adiainw+GG+hha + a GfcyvnDivlai ell +++rvly+did+hhGDgv
ONIVA01G23540.1 116 EGkgggrgvDNPVFDRLWDYCLRYSGGSLAAARALGSGTADIAINWSGGMHHACRGGARGFCYVNDIVLAIRELLAHFRRVLYVDIDVHHGDGV 209
6444455559************************************************************************************ PP
class-1.txt 176 eeafyttdrvmtvsfhkygeeffPgtGdlsdvga.ekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefn 268
+ af++++rvmtvsfh++g +ffPg+G + dvg+ + g+y a+nvP++ gi De+y+++f++++ +v+e+f+PeavvlqcGaDslagDrlge n
ONIVA01G23540.1 210 QAAFEASNRVMTVSFHQHGGGFFPGSGAVADVGKkGPGRYCALNVPVSVGIGDEEYHRLFEPIMARVMEVFQPEAVVLQCGADSLAGDRLGELN 303
********************************97268********************************************************* PP
class-1.txt 269 lsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
l+++gha+cv+f++sfnlpll+lGGGGYt++ va cw+ etav++
ONIVA01G23540.1 304 LTTRGHAQCVSFIRSFNLPLLLLGGGGYTINHVASCWCNETAVAI 348
******************************************975 PP
|
Protein Sequence
(Fasta) | MAMAGGGSNS LPSPSCGDDK KRRVCYYYDP GISTVDYGEG HVMVPHRVTM AHNLVAAYGM 60
LGDMHRLRTA PATAAELADF HDEGYLALLQ DLTPDGCGGD DGVGDMARAR GIYAVEGKGG 120
GRGVDNPVFD RLWDYCLRYS GGSLAAARAL GSGTADIAIN WSGGMHHACR GGARGFCYVN 180
DIVLAIRELL AHFRRVLYVD IDVHHGDGVQ AAFEASNRVM TVSFHQHGGG FFPGSGAVAD 240
VGKKGPGRYC ALNVPVSVGI GDEEYHRLFE PIMARVMEVF QPEAVVLQCG ADSLAGDRLG 300
ELNLTTRGHA QCVSFIRSFN LPLLLLGGGG YTINHVASCW CNETAVAIGK EIPNDIPKHG 360
FDVFYKNQEY KLHYKLETKH LHRNRNTANS IDGIRMAAME NLSKLKLEAA ASVQFEERRH 420
RSINVGDLYY DPREQEEEEE SPTARLHRKL YFEPTGDQES LYTKHRCNVQ PGESSSRKQR 480
KLK 483Protein Fasta Sequence
>ONIVA01G23540.1|Class-I|Oryza nivara
MAMAGGGSNSLPSPSCGDDKKRRVCYYYDPGISTVDYGEGHVMVPHRVTMAHNLVAAYGMLGDMHRLRTAPATAAELADFHDEGYLALLQDLTPDGCGGDDGVGDMARARGIYAVEGKGGGRGVDNPVFDRLWDYCLRYSGGSLAAARALGSGTADIAINWSGGMHHACRGGARGFCYVNDIVLAIRELLAHFRRVLYVDIDVHHGDGVQAAFEASNRVMTVSFHQHGGGFFPGSGAVADVGKKGPGRYCALNVPVSVGIGDEEYHRLFEPIMARVMEVFQPEAVVLQCGADSLAGDRLGELNLTTRGHAQCVSFIRSFNLPLLLLGGGGYTINHVASCWCNETAVAIGKEIPNDIPKHGFDVFYKNQEYKLHYKLETKHLHRNRNTANSIDGIRMAAMENLSKLKLEAAASVQFEERRHRSINVGDLYYDPREQEEEEESPTARLHRKLYFEPTGDQESLYTKHRCNVQPGESSSRKQRKLK |
Nucleotide Sequence
(Fasta) | ATGGCCATGG CCGGCGGCGG CAGCAATTCG CTGCCTTCGC CGTCGTGCGG CGACGACAAG 60
AAGCGGCGGG TGTGCTACTA CTACGACCCG GGGATCTCCA CCGTCGACTA CGGCGAGGGC 120
CACGTCATGG TGCCGCACCG CGTCACCATG GCGCACAACC TCGTCGCCGC CTACGGCATG 180
CTCGGCGACA TGCACCGCCT CCGCACGGCG CCCGCCACGG CGGCGGAGCT CGCCGACTTC 240
CACGACGAGG GCTACCTCGC CCTCCTCCAG GACCTCACCC CGGACGGCTG CGGAGGCGAC 300
GACGGGGTCG GCGACATGGC GCGCGCCAGG GGCATCTACG CCGTCGAGGG CAAGGGCGGC 360
GGCCGCGGCG TCGACAACCC GGTGTTCGAC CGCCTCTGGG ATTACTGCCT CCGCTACTCC 420
GGCGGGTCGC TCGCCGCGGC GCGCGCCCTC GGGAGCGGCA CCGCGGACAT CGCCATCAAC 480
TGGTCGGGCG GGATGCACCA CGCGTGCCGC GGCGGCGCGA GGGGCTTCTG CTACGTGAAC 540
GACATCGTGC TCGCCATCCG CGAGCTGCTC GCCCACTTCC GCCGCGTGCT CTACGTGGAC 600
ATCGACGTCC ACCACGGCGA CGGCGTCCAG GCCGCCTTCG AGGCGTCGAA CCGGGTGATG 660
ACGGTGTCGT TCCACCAGCA CGGCGGTGGC TTCTTCCCGG GCTCCGGCGC CGTCGCCGAC 720
GTCGGCAAGA AGGGCCCCGG CCGCTACTGC GCGCTGAACG TGCCGGTGAG CGTGGGCATC 780
GGCGACGAGG AGTACCACCG GCTGTTCGAG CCGATCATGG CGAGGGTGAT GGAGGTGTTC 840
CAGCCGGAGG CCGTCGTGCT GCAGTGCGGC GCCGACTCCC TCGCCGGCGA CCGGCTCGGC 900
GAGCTGAACC TGACCACGCG CGGCCACGCC CAGTGCGTCA GCTTCATCCG CAGCTTCAAC 960
CTGCCGCTCC TCCTCCTCGG CGGCGGCGGC TACACCATCA ACCACGTCGC CTCCTGCTGG 1020
TGCAATGAGA CGGCGGTGGC CATCGGCAAG GAGATCCCCA ACGACATACC CAAGCATGGT 1080
TTCGACGTGT TCTACAAGAA CCAGGAGTAC AAGCTCCATT ACAAGTTGGA GACGAAGCAC 1140
CTGCACCGCA ACCGCAACAC GGCGAACTCC ATAGACGGCA TCAGGATGGC GGCCATGGAG 1200
AACCTCTCCA AACTGAAGCT GGAGGCGGCG GCGAGCGTGC AGTTCGAGGA GCGCCGCCAC 1260
CGGAGCATCA ACGTCGGCGA CCTCTACTAC GACCCACGCG AGCAGGAAGA GGAAGAGGAG 1320
AGCCCCACGG CGAGGCTGCA CCGGAAGCTC TACTTCGAGC CCACCGGAGA TCAGGAGAGC 1380
CTCTACACTA AGCACAGGTG CAACGTGCAG CCAGGGGAGT CGAGTAGTAG AAAGCAGCGT 1440
AAGCTAAAGT GA
1453Nucleotide Fasta Sequence
>ONIVA01G23540.1|Class-I|Oryza nivara
ATGGCCATGGCCGGCGGCGGCAGCAATTCGCTGCCTTCGCCGTCGTGCGGCGACGACAAGAAGCGGCGGGTGTGCTACTACTACGACCCGGGGATCTCCACCGTCGACTACGGCGAGGGCCACGTCATGGTGCCGCACCGCGTCACCATGGCGCACAACCTCGTCGCCGCCTACGGCATGCTCGGCGACATGCACCGCCTCCGCACGGCGCCCGCCACGGCGGCGGAGCTCGCCGACTTCCACGACGAGGGCTACCTCGCCCTCCTCCAGGACCTCACCCCGGACGGCTGCGGAGGCGACGACGGGGTCGGCGACATGGCGCGCGCCAGGGGCATCTACGCCGTCGAGGGCAAGGGCGGCGGCCGCGGCGTCGACAACCCGGTGTTCGACCGCCTCTGGGATTACTGCCTCCGCTACTCCGGCGGGTCGCTCGCCGCGGCGCGCGCCCTCGGGAGCGGCACCGCGGACATCGCCATCAACTGGTCGGGCGGGATGCACCACGCGTGCCGCGGCGGCGCGAGGGGCTTCTGCTACGTGAACGACATCGTGCTCGCCATCCGCGAGCTGCTCGCCCACTTCCGCCGCGTGCTCTACGTGGACATCGACGTCCACCACGGCGACGGCGTCCAGGCCGCCTTCGAGGCGTCGAACCGGGTGATGACGGTGTCGTTCCACCAGCACGGCGGTGGCTTCTTCCCGGGCTCCGGCGCCGTCGCCGACGTCGGCAAGAAGGGCCCCGGCCGCTACTGCGCGCTGAACGTGCCGGTGAGCGTGGGCATCGGCGACGAGGAGTACCACCGGCTGTTCGAGCCGATCATGGCGAGGGTGATGGAGGTGTTCCAGCCGGAGGCCGTCGTGCTGCAGTGCGGCGCCGACTCCCTCGCCGGCGACCGGCTCGGCGAGCTGAACCTGACCACGCGCGGCCACGCCCAGTGCGTCAGCTTCATCCGCAGCTTCAACCTGCCGCTCCTCCTCCTCGGCGGCGGCGGCTACACCATCAACCACGTCGCCTCCTGCTGGTGCAATGAGACGGCGGTGGCCATCGGCAAGGAGATCCCCAACGACATACCCAAGCATGGTTTCGACGTGTTCTACAAGAACCAGGAGTACAAGCTCCATTACAAGTTGGAGACGAAGCACCTGCACCGCAACCGCAACACGGCGAACTCCATAGACGGCATCAGGATGGCGGCCATGGAGAACCTCTCCAAACTGAAGCTGGAGGCGGCGGCGAGCGTGCAGTTCGAGGAGCGCCGCCACCGGAGCATCAACGTCGGCGACCTCTACTACGACCCACGCGAGCAGGAAGAGGAAGAGGAGAGCCCCACGGCGAGGCTGCACCGGAAGCTCTACTTCGAGCCCACCGGAGATCAGGAGAGCCTCTACACTAAGCACAGGTGCAACGTGCAGCCAGGGGAGTCGAGTAGTAGAAAGCAGCGTAAGCTAAAGTGA
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
