WERAM Information

Tag Content
WERAM ID WERAM-Orm-0006
Ensembl Protein ID OMERI01G19130.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
OMERI01G19130 OMERI01G19130.1 OMERI01G19130.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 2.50e-122 409.4 21 352
Organism Oryza meridionalis
Domain Profile
  HDAC Class-I
      class-1.txt   1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenae................. 77 
                      ++v+y+yd+ ++++ yg++h+m+p+r++++h+Lv +yg+  +++++++  a+a+el+ fh e y+ +l+  +p+  +                 
  OMERI01G19130.1  21 RRVCYYYDPGISTVDYGEGHVMVPHRVTMAHNLVAAYGMLGDMRRLRTAPATAAELADFHDEGYLALLQDLTPDGYHrrggddddgvgdmarar 114
                      589***********************************************************************99889999999999776655 PP
      class-1.txt  78 .elskelkkfnvgedcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlh 170
                        ++ e k  + g d Pvfd l++yc  ++G+sl+aa+ L  ++adiainw+GG+hha +  a GfcyvnDivlai ell +++rvly+did+h
  OMERI01G19130.1 115 gIHAAEGKGGGRGVDNPVFDRLWDYCLRYSGGSLAAARALGGGTADIAINWSGGMHHACRGGARGFCYVNDIVLAIRELLAHFRRVLYVDIDVH 208
                      43445666777888******************************************************************************** PP
      class-1.txt 171 hGDgveeafyttdrvmtvsfhkygeeffPgtGdlsdvga.ekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDr 263
                      hGDgve af++++rvmtvsfh++g +ffPg+G + dvg+ + g+y a+nvP++ gi De+y+++f++++ +v+e+f+PeavvlqcGaDslagDr
  OMERI01G19130.1 209 HGDGVEAAFEASNRVMTVSFHQHGGGFFPGSGAVADVGKkGPGQYCALNVPVSMGIGDEEYHQLFEPIMARVMEVFQPEAVVLQCGADSLAGDR 302
                      *************************************972689*************************************************** PP
      class-1.txt 264 lgefnlsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
                      lge nl+++gha+cv+f++sfnlpll+lGGGGYt++ va cw+ etav++
  OMERI01G19130.1 303 LGELNLTTRGHAQCVSFIRSFNLPLLLLGGGGYTINHVASCWCNETAVAI 352
                      ***********************************************975 PP
Protein Sequence
(Fasta)		MAGVGGGNSL PSPSCGDDKK RRVCYYYDPG ISTVDYGEGH VMVPHRVTMA HNLVAAYGML 60
GDMRRLRTAP ATAAELADFH DEGYLALLQD LTPDGYHRRG GDDDDGVGDM ARARGIHAAE 120
GKGGGRGVDN PVFDRLWDYC LRYSGGSLAA ARALGGGTAD IAINWSGGMH HACRGGARGF 180
CYVNDIVLAI RELLAHFRRV LYVDIDVHHG DGVEAAFEAS NRVMTVSFHQ HGGGFFPGSG 240
AVADVGKKGP GQYCALNVPV SMGIGDEEYH QLFEPIMARV MEVFQPEAVV LQCGADSLAG 300
DRLGELNLTT RGHAQCVSFI RSFNLPLLLL GGGGYTINHV ASCWCNETAV AIGKEIPNDI 360
PKHGFDVFYK NQEYKLHYTL ETKHLPRNRN TANSIDAIRM AAMANLSKLK LEAAASVQFE 420
ERRHRSIDVG DLYYDPREQE EEEESPTARL HRKLYFEPTG DQESLYSKHR CNVQPGESSS 480
RKQRKLK 487
Nucleotide Sequence
(Fasta)		ATGGCCGGCG TCGGCGGCGG CAACTCGCTG CCTTCGCCGT CGTGCGGCGA CGACAAGAAG 60
CGGCGGGTGT GCTACTACTA CGACCCGGGG ATCTCCACCG TCGACTACGG CGAGGGCCAC 120
GTCATGGTGC CGCACCGCGT CACCATGGCG CACAACCTCG TCGCCGCCTA CGGCATGCTC 180
GGCGACATGC GCCGCCTCCG CACGGCGCCC GCCACGGCGG CGGAGCTCGC CGACTTCCAC 240
GACGAGGGCT ACCTTGCCCT CCTCCAGGAC CTCACCCCGG ACGGCTACCA CCGCCGCGGC 300
GGCGACGACG ACGACGGGGT CGGCGACATG GCGCGCGCCA GGGGCATCCA CGCCGCCGAG 360
GGCAAGGGCG GCGGCCGCGG CGTCGACAAC CCGGTGTTCG ACCGCCTCTG GGACTACTGC 420
CTCCGCTACT CCGGCGGGTC GCTCGCCGCG GCGCGCGCCC TCGGGGGCGG CACCGCCGAC 480
ATCGCCATCA ACTGGTCGGG CGGGATGCAC CACGCGTGCC GCGGCGGCGC GAGGGGCTTC 540
TGCTACGTGA ACGACATCGT GCTCGCCATC CGCGAGCTGC TCGCCCACTT CCGCCGCGTG 600
CTCTACGTGG ACATCGACGT CCACCACGGC GACGGCGTCG AGGCCGCCTT CGAGGCGTCG 660
AACCGGGTGA TGACGGTGTC GTTCCACCAG CACGGCGGCG GCTTCTTCCC GGGCTCCGGC 720
GCCGTCGCCG ACGTCGGCAA GAAGGGCCCA GGCCAGTACT GCGCGCTGAA CGTGCCGGTG 780
AGCATGGGCA TCGGCGACGA GGAGTACCAC CAGCTGTTCG AGCCGATCAT GGCGAGGGTG 840
ATGGAGGTGT TCCAGCCGGA GGCCGTCGTG CTGCAGTGCG GCGCCGACTC CCTCGCCGGC 900
GACCGGCTCG GCGAGCTGAA CCTGACCACG CGCGGCCACG CCCAGTGCGT CAGCTTCATC 960
CGCAGCTTCA ACCTGCCGCT CCTCCTCCTC GGCGGCGGCG GCTACACCAT CAACCACGTC 1020
GCCTCCTGCT GGTGCAATGA GACGGCGGTG GCCATCGGCA AGGAAATCCC CAACGACATA 1080
CCCAAGCATG GTTTCGACGT GTTCTACAAG AACCAGGAGT ACAAGCTCCA TTACACGTTG 1140
GAGACGAAGC ACCTGCCCCG CAACCGCAAC ACGGCGAATT CCATAGATGC AATCAGGATG 1200
GCGGCCATGG CGAACCTCTC CAAACTGAAG CTGGAGGCGG CGGCGAGCGT GCAGTTCGAG 1260
GAGCGCCGCC ACCGGAGCAT CGACGTCGGC GACCTCTACT ACGACCCACG CGAGCAGGAA 1320
GAGGAAGAGG AGAGCCCCAC GGCGAGGCTG CACCGGAAGC TCTACTTCGA GCCCACCGGA 1380
GATCAGGAGA GCCTCTACAG TAAGCACAGG TGCAACGTGC AGCCAGGGGA GTCGAGTAGT 1440
AGAAAGCAGC GTAAGCTCAA GTGAAGATCA ATTGGCCCTC TTTGAAAGAG CTGTACAAGA 1500
ACATATGAAA TTGTTCAAAT TTTGATGGAA CCTAGTAGTA ATGTAACATA ACAGAAGGCT 1560
GATGTGGAAA TCGTTTCGAA AACCAATTTG TATATGAGGA GTGCAGAGAG ATTTTGTTTT 1620
TATCAAAAAG GACGTGTTCC ATTTGAACTG ACCCACGTCA TGTCGGAAAA AATTACAAAT 1680
AATAGCTAGG CTATAAATAA ATAGCACATC CATCCCATAT TACAGTTCAT AGGGGGTGTT 1740
TAGAACTATG GGTATAAAGC TTTAG 1766
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orgl-0006 OGLUM01G24610.1 Oryza glumaepatula 93 0.0 852
WERAM-Orni-0005 ONIVA01G23540.1 Oryza nivara 93 0.0 851
WERAM-Orr-0006 ORUFI01G23650.1 Oryza rufipogon 92 0.0 844
WERAM-Orb-0005 OBART01G20930.1 Oryza barthii 91 0.0 822
WERAM-Orp-0006 OPUNC01G21000.1 Oryza punctata 85 0.0 700
WERAM-Ori-0005 BGIOSGA001330-PA Oryza indica 92 2e-169 593
WERAM-Lep-0007 LPERR01G17850.1 Leersia perrieri 69 1e-158 557
WERAM-Orbr-0007 OB01G30550.1 Oryza brachyantha 63 1e-154 543
WERAM-Sob-0048 Sb03g026250.1 Sorghum bicolor 60 7e-128 454
WERAM-Orl-0006 KN538683.1_FGP175 Oryza longistaminata 58 9e-128 454
WERAM-Brd-0084 BRADI3G44780.1 Brachypodium distachyon 58 2e-126 449
WERAM-Ors-0100 OS11T0200000-01 Oryza sativa 58 6e-126 448
WERAM-Aet-0080 EMT05969 Aegilops tauschii 64 1e-118 424
WERAM-Sei-0017 Si004835m Setaria italica 56 2e-113 406
WERAM-Tra-0253 Traes_6AS_5CF7CCD9E.1 Triticum aestivum 52 6e-104 375
WERAM-Glm-0156 GLYMA13G06010.3 Glycine max 51 1e-102 370
WERAM-Met-0084 KEH36404 Medicago truncatula 50 4e-102 369
WERAM-Hov-0099 MLOC_71091.1 Hordeum vulgare 52 2e-101 367
WERAM-Bro-0021 Bo1g151980.1 Brassica oleracea 50 2e-101 367
WERAM-Brr-0202 Bra040131.1-P Brassica rapa 50 2e-101 366
WERAM-Zem-0099 GRMZM2G172883_P01 Zea mays 51 4e-101 365
WERAM-Art-0112 AT4G38130.1 Arabidopsis thaliana 50 5e-101 365
WERAM-Php-0050 PP1S223_52V6.1 Physcomitrella patens 51 5e-101 365
WERAM-Thc-0026 EOX98961 Theobroma cacao 49 6e-101 365
WERAM-Arl-0038 fgenesh1_pm.C_scaffold_7000002 Arabidopsis lyrata 51 6e-101 365
WERAM-Pot-0112 POPTR_0009s17200.1 Populus trichocarpa 50 1e-100 364
WERAM-Viv-0086 VIT_14s0006g01820.t01 Vitis vinifera 50 2e-100 363
WERAM-Sot-0088 PGSC0003DMT400076252 Solanum tuberosum 51 3e-100 363
WERAM-Sol-0120 Solyc09g091440.2.1 Solanum lycopersicum 51 4e-100 362
WERAM-Amt-0016 ERM94967 Amborella trichopoda 50 4e-100 362
WERAM-Prp-0056 EMJ02177 Prunus persica 50 2e-98 357
WERAM-Sem-0132 EFJ35052 Selaginella moellendorffii 50 3e-98 356
WERAM-Mua-0114 GSMUA_Achr8P04190_001 Musa acuminata 49 3e-94 343
WERAM-Org-0090 ORGLA08G0103000.1 Oryza glaberrima 48 7e-94 342
WERAM-Anc-0033 ENSACAP00000004062.3 Anolis carolinensis 48 7e-94 342
WERAM-Ova-0221 ENSOARP00000022517.1 Ovis aries 47 7e-94 342
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 47 7e-94 342
WERAM-Mum-0093 ENSMUSP00000099657.4 Mus musculus 47 7e-94 342
WERAM-Ran-0062 ENSRNOP00000012854.5 Rattus norvegicus 47 8e-94 341
WERAM-Ocp-0006 ENSOPRP00000000780.1 Ochotona princeps 47 8e-94 341
WERAM-Poa-0013 ENSPPYP00000001838.2 Pongo abelii 47 1e-93 341
WERAM-Cap-0092 ENSCPOP00000006985.2 Cavia porcellus 47 1e-93 340
WERAM-Orc-0030 ENSOCUP00000003186.2 Oryctolagus cuniculus 47 2e-93 340
WERAM-Hos-0092 ENSP00000362649.3 Homo sapiens 47 2e-93 340
WERAM-Gog-0132 ENSGGOP00000011454.2 Gorilla gorilla 47 2e-93 340
WERAM-Nol-0026 ENSNLEP00000003167.1 Nomascus leucogenys 47 2e-93 340
WERAM-Otg-0072 ENSOGAP00000005101.2 Otolemur garnettii 47 2e-93 340
WERAM-Gaga-0034 ENSGALP00000005212.3 Gallus gallus 47 2e-93 340
WERAM-Tag-0022 ENSTGUP00000001473.1 Taeniopygia guttata 46 2e-93 340
WERAM-Orn-0136 ENSONIP00000014285.1 Oreochromis niloticus 48 3e-93 339
WERAM-Xim-0061 ENSXMAP00000005239.1 Xiphophorus maculatus 48 3e-93 339
WERAM-Tar-0085 ENSTRUP00000016627.1 Takifugu rubripes 48 5e-93 338
WERAM-Mup-0173 ENSMPUP00000015122.1 Mustela putorius furo 47 6e-93 338
WERAM-Ptv-0152 ENSPVAP00000012567.1 Pteropus vampyrus 47 6e-93 338
WERAM-Orla-0197 ENSORLP00000022529.1 Oryzias latipes 48 8e-93 338
WERAM-Asm-0151 ENSAMXP00000014739.1 Astyanax mexicanus 47 9e-93 338
WERAM-Xet-0037 ENSXETP00000011480.3 Xenopus tropicalis 47 1e-92 337
WERAM-Loa-0056 ENSLAFP00000004079.2 Loxodonta africana 47 2e-92 337
WERAM-Pof-0181 ENSPFOP00000015600.1 Poecilia formosa 47 3e-92 336
WERAM-Dan-0175 ENSDNOP00000033349.1 Dasypus novemcinctus 46 3e-92 336
WERAM-Caf-0116 ENSCAFP00000015619.3 Canis familiaris 47 5e-92 335
WERAM-Dar-0035 ENSDARP00000051798.4 Danio rerio 46 1e-91 334
WERAM-Leo-0014 ENSLOCP00000002993.1 Lepisosteus oculatus 48 1e-91 334
WERAM-Myl-0152 ENSMLUP00000012593.2 Myotis lucifugus 46 2e-91 333
WERAM-Ten-0060 ENSTNIP00000007837.1 Tetraodon nigroviridis 47 2e-91 333
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 47 4e-91 332
WERAM-Gam-0211 ENSGMOP00000020496.1 Gadus morhua 47 4e-91 332
WERAM-Ict-0111 ENSSTOP00000011457.2 Ictidomys tridecemlineatus 47 4e-91 332
WERAM-Mod-0165 ENSMODP00000022264.3 Monodelphis domestica 47 4e-91 332
WERAM-Fia-0139 ENSFALP00000011453.1 Ficedula albicollis 47 4e-91 332
WERAM-Paa-0030 ENSPANP00000015145.1 Papio anubis 47 4e-91 332
WERAM-Chs-0191 ENSCSAP00000011772.1 Chlorocebus sabaeus 47 4e-91 332
WERAM-Gaa-0093 ENSGACP00000012045.1 Gasterosteus aculeatus 47 6e-91 332
WERAM-Sus-0028 ENSSSCP00000004781.2 Sus scrofa 47 7e-91 332
WERAM-Pat-0155 ENSPTRP00000049696.3 Pan troglodytes 47 1e-90 331
WERAM-Aim-0151 ENSAMEP00000013919.1 Ailuropoda melanoleuca 47 1e-90 331
WERAM-Tut-0167 ENSTTRP00000014262.1 Tursiops truncatus 46 7e-90 328
WERAM-Cii-0014 ENSCINP00000005410.3 Ciona intestinalis 46 7e-90 328
WERAM-Drm-0018 FBpp0073173 Drosophila melanogaster 45 1e-89 327
WERAM-Pes-0020 ENSPSIP00000004435.1 Pelodiscus sinensis 46 2e-89 327
WERAM-Osl-0001 ABO94696 Ostreococcus lucimarinus 46 9e-89 325
WERAM-Cae-0005 C53A5.3 Caenorhabditis elegans 47 9e-89 324
WERAM-Meg-0047 ENSMGAP00000004521.2 Meleagris gallopavo 46 5e-88 322
WERAM-Eqc-0125 ENSECAP00000014039.1 Equus caballus 47 1e-87 321
WERAM-Anp-0136 ENSAPLP00000014652.1 Anas platyrhynchos 46 1e-87 321
WERAM-Scp-0016 SPAC3G9.07c.1:pep Schizosaccharomyces pombe 45 2e-87 320
WERAM-Mam-0073 ENSMMUP00000011716.2 Macaca mulatta 50 3e-87 320
WERAM-Fec-0156 ENSFCAP00000015379.2 Felis catus 46 1e-86 317
WERAM-Ere-0068 ENSEEUP00000005465.1 Erinaceus europaeus 47 4e-86 316
WERAM-Sah-0134 ENSSHAP00000014467.1 Sarcophilus harrisii 47 4e-86 315
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 45 7e-86 315
WERAM-Asni-0020 CADANGAP00005938 Aspergillus niger 44 5e-85 312
Created Date 25-Jun-2016